RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 PMVKQ15126 192 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
CHD3-211ENST00000481999 A0A1B0GWB2 263 aa10.53□□□□□ -0.72
CHD3-211ENST00000481999 ZNF815PA8K554 130 aa10.53□□□□□ -0.72
CHD3-211ENST00000481999 HERVK_113P61574 105 aa10.53□□□□□ -0.72
CHD3-211ENST00000481999 Q9UF83 564 aa10.53□□□□□ -0.72
CHD3-211ENST00000481999 IGLV4-69A0A075B6H9 119 aa10.52□□□□□ -0.72
CHD3-211ENST00000481999 C11orf86A6NJI1 115 aa10.52□□□□□ -0.72
CHD3-211ENST00000481999 G3V4G9 280 aa10.52□□□□□ -0.72
CHD3-211ENST00000481999 CRLF1O75462 422 aa10.52□□□□□ -0.73
CHD3-211ENST00000481999 ZNF56Q15929 161 aa10.52□□□□□ -0.73
CHD3-211ENST00000481999 M0QY20 66 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 AZU1P20160 251 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
CHD3-211ENST00000481999 SCGB1D4Q6XE38 83 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 NDUFA7O95182 113 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 P0DMU3 169 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 FAM231AP0DMU4 169 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 FAM231CP0DMU5 169 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 RRN3P1Q2M238 152 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 LINC01587Q99440 93 aa10.51□□□□□ -0.73
CHD3-211ENST00000481999 A8MTW9 85 aa10.5□□□□□ -0.73
CHD3-211ENST00000481999 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
CHD3-211ENST00000481999 TRPT1Q86TN4 253 aaKnown RBP10.5□□□□□ -0.73
CHD3-211ENST00000481999 STHQ8IWL8 128 aa10.5□□□□□ -0.73
CHD3-211ENST00000481999 PKD1L1Q8TDX9 2849 aa10.5□□□□□ -0.73
CHD3-211ENST00000481999 TRAV2A0A0B4J234 112 aa10.5□□□□□ -0.73
CHD3-211ENST00000481999 A6NJY4 79 aa10.5□□□□□ -0.73
CHD3-211ENST00000481999 RHOHQ15669 191 aa10.5□□□□□ -0.73
CHD3-211ENST00000481999 STAB1Q9NY15 2570 aa10.49□□□□□ -0.73
CHD3-211ENST00000481999 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
CHD3-211ENST00000481999 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
CHD3-211ENST00000481999 F8W1H4 67 aa10.48□□□□□ -0.73
CHD3-211ENST00000481999 IGLV1-51P01701 117 aa10.48□□□□□ -0.73
CHD3-211ENST00000481999 EMP1P54849 157 aa10.48□□□□□ -0.73
CHD3-211ENST00000481999 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
CHD3-211ENST00000481999 PLEKHB2Q96CS7 222 aa10.48□□□□□ -0.73
CHD3-211ENST00000481999 MRPL16Q9NX20 251 aaKnown RBP10.48□□□□□ -0.73
CHD3-211ENST00000481999 RPL24P83731 157 aaKnown RBP10.47□□□□□ -0.73
CHD3-211ENST00000481999 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
CHD3-211ENST00000481999 PF4P02776 101 aa10.47□□□□□ -0.73
CHD3-211ENST00000481999 C11orf72Q8NBR9 251 aa10.47□□□□□ -0.73
CHD3-211ENST00000481999 GIG44P09565 113 aaPredicted RBP10.46□□□□□ -0.73
CHD3-211ENST00000481999 TMEM170BQ5T4T1 132 aa10.46□□□□□ -0.73
CHD3-211ENST00000481999 Q6ZSN1 163 aa10.46□□□□□ -0.73
CHD3-211ENST00000481999 TRAV25A0A0B4J276 109 aa10.46□□□□□ -0.74
CHD3-211ENST00000481999 INSP01308 110 aa10.46□□□□□ -0.74
CHD3-211ENST00000481999 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.46□□□□□ -0.74
CHD3-211ENST00000481999 ZNRF2Q8NHG8 242 aa10.46□□□□□ -0.74
CHD3-211ENST00000481999 C19orf73Q9NVV2 129 aa10.46□□□□□ -0.74
CHD3-211ENST00000481999 A0A0J9YY99 117 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 I3L3M4 83 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 NFE4Q86UQ8 179 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 TEX48A0A1B0GUV7 120 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 H3BMG7 143 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 UBE2D1P51668 147 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 C20orf203Q8NBC4 194 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 PGPEP1Q9NXJ5 209 aa10.45□□□□□ -0.74
CHD3-211ENST00000481999 ANK2Q01484 3957 aa10.44□□□□□ -0.74
CHD3-211ENST00000481999 SPANXB1Q9NS25 103 aaPredicted RBP10.44□□□□□ -0.74
CHD3-211ENST00000481999 GAGE13Q4V321 117 aa10.43□□□□□ -0.74
CHD3-211ENST00000481999 NDUFA11Q86Y39 141 aa10.43□□□□□ -0.74
CHD3-211ENST00000481999 LINC00482Q8N8I6 264 aa10.43□□□□□ -0.74
CHD3-211ENST00000481999 EDA2RQ9HAV5 297 aa10.43□□□□□ -0.74
CHD3-211ENST00000481999 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
CHD3-211ENST00000481999 WFDC2Q14508 124 aa10.43□□□□□ -0.74
CHD3-211ENST00000481999 J3QQQ9 107 aa10.42□□□□□ -0.74
CHD3-211ENST00000481999 LGALS3P17931 250 aaKnown RBP10.42□□□□□ -0.74
CHD3-211ENST00000481999 SLC25A29Q8N8R3 303 aa10.42□□□□□ -0.74
CHD3-211ENST00000481999 M0R2P5 195 aa10.41□□□□□ -0.74
CHD3-211ENST00000481999 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
CHD3-211ENST00000481999 OPRPNQ99935 248 aaPredicted RBP10.41□□□□□ -0.74
CHD3-211ENST00000481999 J3QR89 54 aa10.41□□□□□ -0.74
CHD3-211ENST00000481999 ZNF415Q09FC8 603 aa10.41□□□□□ -0.74
CHD3-211ENST00000481999 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
CHD3-211ENST00000481999 AMELXQ99217 191 aa10.41□□□□□ -0.74
CHD3-211ENST00000481999 IGHV3-53P01767 116 aa10.4□□□□□ -0.74
CHD3-211ENST00000481999 VCX2Q9H322 139 aa10.4□□□□□ -0.74
CHD3-211ENST00000481999 PRO0461Q9UI25 63 aa10.4□□□□□ -0.74
CHD3-211ENST00000481999 TMEM223A0PJW6 202 aa10.4□□□□□ -0.75
CHD3-211ENST00000481999 LEPROTO15243 131 aa10.4□□□□□ -0.75
CHD3-211ENST00000481999 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 TRGV1A0A0A0MS02 117 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 A8MWV9 139 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 TSPAN13O95857 204 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 Q6ZTI0 123 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 PRIMA1Q86XR5 153 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 LYRM7Q5U5X0 104 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 PYGO1Q9Y3Y4 419 aa10.39□□□□□ -0.75
CHD3-211ENST00000481999 IGHV3-38A0A0C4DH36 116 aa10.38□□□□□ -0.75
CHD3-211ENST00000481999 RHODO00212 210 aa10.38□□□□□ -0.75
CHD3-211ENST00000481999 APOMO95445 188 aa10.38□□□□□ -0.75
CHD3-211ENST00000481999 ETDBQ3ZM63 59 aa10.38□□□□□ -0.75
CHD3-211ENST00000481999 ZNF22P17026 224 aaPredicted RBP10.38□□□□□ -0.75
CHD3-211ENST00000481999 PTH2Q96A98 100 aa10.37□□□□□ -0.75
CHD3-211ENST00000481999 NOP10Q9NPE3 64 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms