RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 TM2D2Q9BX73 214 aa14.14□□□□□ -0.15
CCM2-214ENST00000481194 WFDC10AQ9H1F0 79 aa14.13□□□□□ -0.15
CCM2-214ENST00000481194 DLEU1O43261 78 aa14.13□□□□□ -0.15
CCM2-214ENST00000481194 TRAV26-1A0A087WT03 109 aa14.13□□□□□ -0.15
CCM2-214ENST00000481194 NPSP0C0P6 89 aa14.13□□□□□ -0.15
CCM2-214ENST00000481194 IGHV4-30-4P0DP06 118 aa14.13□□□□□ -0.15
CCM2-214ENST00000481194 PTH2Q96A98 100 aa14.12□□□□□ -0.15
CCM2-214ENST00000481194 MKI67P46013 3256 aaKnown RBP14.12□□□□□ -0.15
CCM2-214ENST00000481194 CXCL5P42830 114 aa14.12□□□□□ -0.15
CCM2-214ENST00000481194 A0A0J9YXV3 536 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 LINC00173Q6ZV60 143 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 TRAV10A0A0B4J240 114 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 TRBV27A0A0K0K1C4 114 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 IGHV3-30P01768 117 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 IGHV3-33P01772 117 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 IGHV3-30-3P0DP02 117 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 IGHV3-30-5P0DP03 117 aa14.11□□□□□ -0.15
CCM2-214ENST00000481194 DEFB131BA0A096LNP1 70 aa14.1□□□□□ -0.15
CCM2-214ENST00000481194 C15orf53Q8NAA6 179 aa14.1□□□□□ -0.15
CCM2-214ENST00000481194 Q6ZVH6 145 aa14.1□□□□□ -0.15
CCM2-214ENST00000481194 ZNF625Q96I27 306 aaPredicted RBP14.1□□□□□ -0.15
CCM2-214ENST00000481194 ODF1Q14990 250 aa14.09□□□□□ -0.15
CCM2-214ENST00000481194 SCRT2Q9NQ03 307 aa14.09□□□□□ -0.15
CCM2-214ENST00000481194 PFN2P35080 140 aa14.09□□□□□ -0.15
CCM2-214ENST00000481194 OXLD1Q5BKU9 147 aa14.08□□□□□ -0.15
CCM2-214ENST00000481194 P0DMU3 169 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 FAM231AP0DMU4 169 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 FAM231CP0DMU5 169 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 IFITM1P13164 125 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 UBE2V1Q13404 147 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 CEND1Q8N111 149 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 COX7B2Q8TF08 81 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 CRYGDP07320 174 aa14.08□□□□□ -0.16
CCM2-214ENST00000481194 TINCRA0A1B0GVN0 87 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 E9PLD3 99 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 Q9H8V8 135 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 IGLL5B9A064 214 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 BEAN1Q3B7T3 259 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 NRACQ8N912 160 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 BRCA2P51587 3418 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 TRAV13-2A0A0B4J235 113 aa14.07□□□□□ -0.16
CCM2-214ENST00000481194 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
CCM2-214ENST00000481194 C2orf82Q6UX34 121 aa14.06□□□□□ -0.16
CCM2-214ENST00000481194 C5orf38Q86SI9 138 aa14.06□□□□□ -0.16
CCM2-214ENST00000481194 PYGO1Q9Y3Y4 419 aa14.06□□□□□ -0.16
CCM2-214ENST00000481194 TET2Q6N021 2002 aaPredicted RBP14.06□□□□□ -0.16
CCM2-214ENST00000481194 NXPH4O95158 308 aa14.05□□□□□ -0.16
CCM2-214ENST00000481194 ANAPC13Q9BS18 74 aa14.05□□□□□ -0.16
CCM2-214ENST00000481194 Q9HAA7 133 aa14.05□□□□□ -0.16
CCM2-214ENST00000481194 TRBV6-8A0A0A6YYG3 113 aa14.05□□□□□ -0.16
CCM2-214ENST00000481194 NAA38Q9BRA0 125 aaKnown RBP14.05□□□□□ -0.16
CCM2-214ENST00000481194 Q6ZUT4 128 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 COX11Q9Y6N1 276 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 HIGD1BQ9P298 99 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 GAGE2BQ13066 116 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 GAGE2EQ4V326 116 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 KRTAP1-3Q8IUG1 177 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 C1orf158Q8N1D5 194 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 GAGE2DQ9UEU5 116 aa14.03□□□□□ -0.16
CCM2-214ENST00000481194 IGHV1-58A0A0C4DH39 117 aa14.02□□□□□ -0.17
CCM2-214ENST00000481194 MAJINQ3KP22 176 aa14.02□□□□□ -0.17
CCM2-214ENST00000481194 CAMK2N2Q96S95 79 aa14.02□□□□□ -0.17
CCM2-214ENST00000481194 KLK12Q9UKR0 248 aa14.01□□□□□ -0.17
CCM2-214ENST00000481194 POLR2KP53803 58 aaKnown RBP14.01□□□□□ -0.17
CCM2-214ENST00000481194 LAMTOR3Q9UHA4 124 aa14.01□□□□□ -0.17
CCM2-214ENST00000481194 NDUFA1O15239 70 aa14□□□□□ -0.17
CCM2-214ENST00000481194 RNF183Q96D59 192 aa14□□□□□ -0.17
CCM2-214ENST00000481194 ANKRD39Q53RE8 183 aa14□□□□□ -0.17
CCM2-214ENST00000481194 ZFAND6Q6FIF0 208 aa14□□□□□ -0.17
CCM2-214ENST00000481194 CITED1Q99966 193 aa14□□□□□ -0.17
CCM2-214ENST00000481194 BVES-AS1Q5T3Y7 98 aa14□□□□□ -0.17
CCM2-214ENST00000481194 TSHBP01222 138 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 PCP2Q8IVA1 136 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 RNASE8Q8TDE3 154 aaKnown RBP13.99□□□□□ -0.17
CCM2-214ENST00000481194 PRO1854Q9UHT4 67 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 IGLV10-54A0A075B6I4 117 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 TRBV20-1A0A075B6N2 111 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 FAM19A4Q96LR4 140 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 DSCAML1Q8TD84 2053 aa13.99□□□□□ -0.17
CCM2-214ENST00000481194 IGLV4-3A0A075B6K6 122 aa13.98□□□□□ -0.17
CCM2-214ENST00000481194 C14orf177Q52M58 125 aa13.98□□□□□ -0.17
CCM2-214ENST00000481194 REG3AQ06141 175 aa13.98□□□□□ -0.17
CCM2-214ENST00000481194 F8WEM9 126 aa13.97□□□□□ -0.17
CCM2-214ENST00000481194 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
CCM2-214ENST00000481194 UBE2D3P61077 147 aa13.97□□□□□ -0.17
CCM2-214ENST00000481194 UBE2D2P62837 147 aa13.97□□□□□ -0.17
CCM2-214ENST00000481194 MRPS36P82909 103 aaKnown RBP13.97□□□□□ -0.17
CCM2-214ENST00000481194 LELP1Q5T871 98 aa13.97□□□□□ -0.17
CCM2-214ENST00000481194 TRAV8-3A0A0A6YYJ7 113 aa13.97□□□□□ -0.17
CCM2-214ENST00000481194 C9orf118A6NHY6 69 aa13.96□□□□□ -0.17
CCM2-214ENST00000481194 TIRAPP58753 221 aa13.96□□□□□ -0.17
CCM2-214ENST00000481194 LRRK2Q5S007 2527 aa13.96□□□□□ -0.17
CCM2-214ENST00000481194 NOTCH3Q9UM47 2321 aa13.96□□□□□ -0.18
CCM2-214ENST00000481194 SPAG11BQ08648 103 aa13.95□□□□□ -0.18
CCM2-214ENST00000481194 OPRPNQ99935 248 aaPredicted RBP13.94□□□□□ -0.18
CCM2-214ENST00000481194 C9JAW5 83 aa13.94□□□□□ -0.18
CCM2-214ENST00000481194 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
CCM2-214ENST00000481194 SNHG12Q9BXW3 62 aa13.94□□□□□ -0.18
CCM2-214ENST00000481194 GAGE12HA6NDE8 117 aa13.94□□□□□ -0.18
CCM2-214ENST00000481194 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms