RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PGLYRP4Q96LB8 373 aa12.04□□□□□ -0.48
ABCF3-214ENST00000480562 UBE2L6O14933 153 aa12.03□□□□□ -0.48
ABCF3-214ENST00000480562 SLPIP03973 132 aa12.03□□□□□ -0.48
ABCF3-214ENST00000480562 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
ABCF3-214ENST00000480562 NUDT10Q8NFP7 164 aa12.03□□□□□ -0.48
ABCF3-214ENST00000480562 NUDT11Q96G61 164 aa12.03□□□□□ -0.48
ABCF3-214ENST00000480562 BCL2P10415 239 aa12.02□□□□□ -0.49
ABCF3-214ENST00000480562 CTRLP40313 264 aa12.02□□□□□ -0.49
ABCF3-214ENST00000480562 AMTP48728 403 aa12.02□□□□□ -0.49
ABCF3-214ENST00000480562 COTL1Q14019 142 aa12.02□□□□□ -0.49
ABCF3-214ENST00000480562 C9orf62Q8N4C0 152 aa12.02□□□□□ -0.49
ABCF3-214ENST00000480562 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
ABCF3-214ENST00000480562 UBR4Q5T4S7 5183 aa12.01□□□□□ -0.49
ABCF3-214ENST00000480562 CHTF8P0CG12 524 aa12.01□□□□□ -0.49
ABCF3-214ENST00000480562 TWIST1Q15672 202 aa12.01□□□□□ -0.49
ABCF3-214ENST00000480562 DPH3Q96FX2 82 aa12.01□□□□□ -0.49
ABCF3-214ENST00000480562 BIN3Q9NQY0 253 aa12.01□□□□□ -0.49
ABCF3-214ENST00000480562 IGHV3-64A0A075B6Q5 118 aa12□□□□□ -0.49
ABCF3-214ENST00000480562 TRAV26-2A0A0B4J265 109 aa12□□□□□ -0.49
ABCF3-214ENST00000480562 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
ABCF3-214ENST00000480562 WDR73Q6P4I2 378 aa12□□□□□ -0.49
ABCF3-214ENST00000480562 PLA2G2DQ9UNK4 145 aa12□□□□□ -0.49
ABCF3-214ENST00000480562 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.99□□□□□ -0.49
ABCF3-214ENST00000480562 IGKV3OR2-268A0A0C4DH90 116 aa11.99□□□□□ -0.49
ABCF3-214ENST00000480562 GATD1Q8NB37 220 aa11.99□□□□□ -0.49
ABCF3-214ENST00000480562 RNASE7Q9H1E1 156 aaKnown RBP11.99□□□□□ -0.49
ABCF3-214ENST00000480562 GAGE12HA6NDE8 117 aa11.98□□□□□ -0.49
ABCF3-214ENST00000480562 RPP21Q9H633 154 aaKnown RBP11.98□□□□□ -0.49
ABCF3-214ENST00000480562 A0A087WYN8 130 aa11.97□□□□□ -0.49
ABCF3-214ENST00000480562 K7EN84 100 aa11.97□□□□□ -0.49
ABCF3-214ENST00000480562 C15orf56Q8N910 161 aa11.97□□□□□ -0.49
ABCF3-214ENST00000480562 RPL39LQ96EH5 51 aaKnown RBP11.97□□□□□ -0.49
ABCF3-214ENST00000480562 CNFNQ9BYD5 112 aa11.97□□□□□ -0.49
ABCF3-214ENST00000480562 FOXA3P55318 350 aaPredicted RBP11.96□□□□□ -0.49
ABCF3-214ENST00000480562 Q6ZNX1 250 aa11.96□□□□□ -0.49
ABCF3-214ENST00000480562 OCC1Q8TAD7 63 aa11.96□□□□□ -0.49
ABCF3-214ENST00000480562 SPACA4Q8TDM5 124 aa11.95□□□□□ -0.5
ABCF3-214ENST00000480562 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
ABCF3-214ENST00000480562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.94□□□□□ -0.5
ABCF3-214ENST00000480562 IGKV2-29A2NJV5 120 aaPredicted RBP11.94□□□□□ -0.5
ABCF3-214ENST00000480562 MT1HL1P0DM35 61 aa11.94□□□□□ -0.5
ABCF3-214ENST00000480562 HIGD2BQ4VC39 106 aa11.94□□□□□ -0.5
ABCF3-214ENST00000480562 AMMECR1LQ6DCA0 310 aa11.94□□□□□ -0.5
ABCF3-214ENST00000480562 SLC51BQ86UW2 128 aa11.94□□□□□ -0.5
ABCF3-214ENST00000480562 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
ABCF3-214ENST00000480562 RNASEKQ6P5S7 137 aaKnown RBP11.93□□□□□ -0.5
ABCF3-214ENST00000480562 CFAP161Q6P656 301 aa11.93□□□□□ -0.5
ABCF3-214ENST00000480562 TCTE3Q8IZS6 198 aa11.93□□□□□ -0.5
ABCF3-214ENST00000480562 CHCHD10Q8WYQ3 142 aaPredicted RBP11.93□□□□□ -0.5
ABCF3-214ENST00000480562 TAGLN2P37802 199 aaKnown RBP11.92□□□□□ -0.5
ABCF3-214ENST00000480562 COX6A2Q02221 97 aa11.92□□□□□ -0.5
ABCF3-214ENST00000480562 Q6ZRU5 148 aa11.92□□□□□ -0.5
ABCF3-214ENST00000480562 SMIM15Q7Z3B0 74 aa11.92□□□□□ -0.5
ABCF3-214ENST00000480562 APCSP02743 223 aa11.91□□□□□ -0.5
ABCF3-214ENST00000480562 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
ABCF3-214ENST00000480562 PLAC8Q9NZF1 115 aa11.91□□□□□ -0.5
ABCF3-214ENST00000480562 TNXBP22105 4242 aa11.9□□□□□ -0.5
ABCF3-214ENST00000480562 SDHAF1A6NFY7 115 aa11.9□□□□□ -0.5
ABCF3-214ENST00000480562 PHOX2AO14813 284 aa11.9□□□□□ -0.5
ABCF3-214ENST00000480562 NCR2O95944 276 aa11.9□□□□□ -0.5
ABCF3-214ENST00000480562 FGF6P10767 208 aa11.9□□□□□ -0.5
ABCF3-214ENST00000480562 PRSS3P2Q8NHM4 247 aa11.9□□□□□ -0.5
ABCF3-214ENST00000480562 GATCO43716 136 aaKnown RBP11.89□□□□□ -0.51
ABCF3-214ENST00000480562 IGKV2-24A0A0C4DH68 120 aa11.88□□□□□ -0.51
ABCF3-214ENST00000480562 MAJINQ3KP22 176 aa11.88□□□□□ -0.51
ABCF3-214ENST00000480562 GVQW2A0A096LPI5 108 aaPredicted RBP11.87□□□□□ -0.51
ABCF3-214ENST00000480562 FAM231BA6NCW3 169 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 H7C423 109 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 NDUFS6O75380 124 aaKnown RBP11.87□□□□□ -0.51
ABCF3-214ENST00000480562 GAS8-AS1O95177 125 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 PMCHP20382 165 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 FOXI1Q12951 378 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
ABCF3-214ENST00000480562 I3L3M4 83 aa11.86□□□□□ -0.51
ABCF3-214ENST00000480562 A8MWL6 223 aa11.85□□□□□ -0.51
ABCF3-214ENST00000480562 XCL1P47992 114 aa11.85□□□□□ -0.51
ABCF3-214ENST00000480562 CEBPGP53567 150 aa11.85□□□□□ -0.51
ABCF3-214ENST00000480562 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
ABCF3-214ENST00000480562 TMEM250H0YL14 139 aa11.84□□□□□ -0.51
ABCF3-214ENST00000480562 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-214ENST00000480562 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
ABCF3-214ENST00000480562 STPG4Q8N801 248 aa11.84□□□□□ -0.51
ABCF3-214ENST00000480562 LYPD6BQ8NI32 183 aa11.84□□□□□ -0.51
ABCF3-214ENST00000480562 LINC00526Q96FQ7 95 aa11.84□□□□□ -0.51
ABCF3-214ENST00000480562 TMEM242Q9NWH2 141 aa11.84□□□□□ -0.51
ABCF3-214ENST00000480562 A0A096LNI7 61 aa11.83□□□□□ -0.52
ABCF3-214ENST00000480562 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
ABCF3-214ENST00000480562 TSHBP01222 138 aa11.83□□□□□ -0.52
ABCF3-214ENST00000480562 ALKAL2Q6UX46 152 aa11.83□□□□□ -0.52
ABCF3-214ENST00000480562 TMEM101Q96IK0 257 aa11.83□□□□□ -0.52
ABCF3-214ENST00000480562 BTF3L4Q96K17 158 aa11.83□□□□□ -0.52
ABCF3-214ENST00000480562 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
ABCF3-214ENST00000480562 CCL25O15444 150 aa11.82□□□□□ -0.52
ABCF3-214ENST00000480562 ESDP10768 282 aa11.82□□□□□ -0.52
ABCF3-214ENST00000480562 BLOC1S1P78537 153 aa11.82□□□□□ -0.52
ABCF3-214ENST00000480562 ST20Q9HBF5 79 aa11.82□□□□□ -0.52
ABCF3-214ENST00000480562 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
ABCF3-214ENST00000480562 CT83Q5H943 113 aa11.81□□□□□ -0.52
ABCF3-214ENST00000480562 BORCS7Q96B45 105 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms