RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 TNP2Q05952 138 aa10.19□□□□□ -0.78
ABCF3-213ENST00000480539 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
ABCF3-213ENST00000480539 SVBPQ8N300 66 aa10.19□□□□□ -0.78
ABCF3-213ENST00000480539 CHCHD7Q9BUK0 85 aa10.19□□□□□ -0.78
ABCF3-213ENST00000480539 TMEM242Q9NWH2 141 aa10.19□□□□□ -0.78
ABCF3-213ENST00000480539 I3L3M4 83 aa10.18□□□□□ -0.78
ABCF3-213ENST00000480539 APCSP02743 223 aa10.18□□□□□ -0.78
ABCF3-213ENST00000480539 BTF3P20290 206 aaKnown RBP10.18□□□□□ -0.78
ABCF3-213ENST00000480539 PMCHP20382 165 aa10.18□□□□□ -0.78
ABCF3-213ENST00000480539 LAGE3Q14657 143 aa10.18□□□□□ -0.78
ABCF3-213ENST00000480539 KLK12Q9UKR0 248 aa10.18□□□□□ -0.78
ABCF3-213ENST00000480539 TRAV9-1A0A075B6T8 112 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 SNAPINO95295 136 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 TSHBP01222 138 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 PKIAP61925 76 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
ABCF3-213ENST00000480539 ATRAIDQ6UW56 229 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 NFE4Q86UQ8 179 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 Q8N976 141 aa10.17□□□□□ -0.78
ABCF3-213ENST00000480539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
ABCF3-213ENST00000480539 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
ABCF3-213ENST00000480539 UBE2L6O14933 153 aa10.16□□□□□ -0.78
ABCF3-213ENST00000480539 TNFRSF6BO95407 300 aa10.16□□□□□ -0.78
ABCF3-213ENST00000480539 PPP1R17O96001 155 aa10.16□□□□□ -0.78
ABCF3-213ENST00000480539 NPYP01303 97 aa10.16□□□□□ -0.78
ABCF3-213ENST00000480539 ANGP03950 147 aaKnown RBP10.16□□□□□ -0.78
ABCF3-213ENST00000480539 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
ABCF3-213ENST00000480539 RBX1P62877 108 aa10.16□□□□□ -0.78
ABCF3-213ENST00000480539 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
ABCF3-213ENST00000480539 TRBV27A0A0K0K1C4 114 aa10.15□□□□□ -0.78
ABCF3-213ENST00000480539 A0A1B0GVY2 172 aa10.15□□□□□ -0.78
ABCF3-213ENST00000480539 CLPSL2Q6UWE3 100 aa10.15□□□□□ -0.78
ABCF3-213ENST00000480539 ORMDL3Q8N138 153 aa10.15□□□□□ -0.78
ABCF3-213ENST00000480539 UBE2WQ96B02 151 aa10.15□□□□□ -0.78
ABCF3-213ENST00000480539 PRELID3AQ96N28 172 aa10.15□□□□□ -0.78
ABCF3-213ENST00000480539 PPBPP02775 128 aa10.14□□□□□ -0.79
ABCF3-213ENST00000480539 ELOBQ15370 118 aa10.14□□□□□ -0.79
ABCF3-213ENST00000480539 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
ABCF3-213ENST00000480539 VCYO14598 125 aa10.13□□□□□ -0.79
ABCF3-213ENST00000480539 PSCAO43653 123 aa10.13□□□□□ -0.79
ABCF3-213ENST00000480539 CRPP02741 224 aa10.13□□□□□ -0.79
ABCF3-213ENST00000480539 FCER1GP30273 86 aa10.13□□□□□ -0.79
ABCF3-213ENST00000480539 C20orf78Q9BR46 151 aa10.13□□□□□ -0.79
ABCF3-213ENST00000480539 PKD1P98161 4303 aa10.12□□□□□ -0.79
ABCF3-213ENST00000480539 IGLV4-60A0A075B6I1 120 aa10.12□□□□□ -0.79
ABCF3-213ENST00000480539 TRBV24-1A0A075B6N3 115 aa10.12□□□□□ -0.79
ABCF3-213ENST00000480539 TRAV8-3A0A0A6YYJ7 113 aa10.12□□□□□ -0.79
ABCF3-213ENST00000480539 KIR2DL4Q99706 377 aa10.12□□□□□ -0.79
ABCF3-213ENST00000480539 DNAH11Q96DT5 4516 aa10.12□□□□□ -0.79
ABCF3-213ENST00000480539 IGKV2D-24A0A075B6R9 120 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 TGIF2-C20orf24A0A0A6YYL0 155 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 PHOX2AO14813 284 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 AMMECR1LQ6DCA0 310 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 ENHOQ6UWT2 76 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 C20orf203Q8NBC4 194 aa10.11□□□□□ -0.79
ABCF3-213ENST00000480539 HLA-DQA1P01909 254 aa10.1□□□□□ -0.79
ABCF3-213ENST00000480539 FGF6P10767 208 aa10.1□□□□□ -0.79
ABCF3-213ENST00000480539 ESDP10768 282 aa10.1□□□□□ -0.79
ABCF3-213ENST00000480539 RPL32P62910 135 aaKnown RBP10.1□□□□□ -0.79
ABCF3-213ENST00000480539 KIAA1644Q3SXP7 199 aa10.1□□□□□ -0.79
ABCF3-213ENST00000480539 RNASEKQ6P5S7 137 aaKnown RBP10.1□□□□□ -0.79
ABCF3-213ENST00000480539 Q0VG73 95 aa10.09□□□□□ -0.79
ABCF3-213ENST00000480539 RMI2Q96E14 147 aa10.09□□□□□ -0.79
ABCF3-213ENST00000480539 TM2D2Q9BX73 214 aa10.09□□□□□ -0.79
ABCF3-213ENST00000480539 GNB1LQ9BYB4 327 aa10.09□□□□□ -0.79
ABCF3-213ENST00000480539 MAP1LC3AQ9H492 121 aa10.09□□□□□ -0.79
ABCF3-213ENST00000480539 LAMTOR2Q9Y2Q5 125 aa10.09□□□□□ -0.79
ABCF3-213ENST00000480539 LOC389332A0A1B0GUA5 103 aa10.08□□□□□ -0.8
ABCF3-213ENST00000480539 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
ABCF3-213ENST00000480539 H7C423 109 aa10.08□□□□□ -0.8
ABCF3-213ENST00000480539 TCAPO15273 167 aa10.08□□□□□ -0.8
ABCF3-213ENST00000480539 REG3AQ06141 175 aa10.08□□□□□ -0.8
ABCF3-213ENST00000480539 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
ABCF3-213ENST00000480539 A0A087WTM6 91 aa10.07□□□□□ -0.8
ABCF3-213ENST00000480539 IGKV3OR2-268A0A0C4DH90 116 aa10.07□□□□□ -0.8
ABCF3-213ENST00000480539 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
ABCF3-213ENST00000480539 C1orf43Q9BWL3 253 aa10.07□□□□□ -0.8
ABCF3-213ENST00000480539 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
ABCF3-213ENST00000480539 BIRC6Q9NR09 4857 aa10.07□□□□□ -0.8
ABCF3-213ENST00000480539 IGLV10-54A0A075B6I4 117 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 LECT2O14960 151 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 MT-ND6P03923 174 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 ZNF25P17030 456 aaPredicted RBP10.06□□□□□ -0.8
ABCF3-213ENST00000480539 MIAQ16674 131 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 COX19Q49B96 90 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 SPATA12Q7Z6I5 190 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 PKHD1P08F94 4074 aa10.06□□□□□ -0.8
ABCF3-213ENST00000480539 LRCOL1A6NCL2 159 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 EREGO14944 169 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.8
ABCF3-213ENST00000480539 KRTAP10-2P60368 255 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 RPL39P62891 51 aaKnown RBP10.05□□□□□ -0.8
ABCF3-213ENST00000480539 WFDC2Q14508 124 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 MAPKAPK5-AS1Q8N8E1 139 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 OR5A1Q8NGJ0 315 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 TMEM101Q96IK0 257 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 COX11Q9Y6N1 276 aa10.05□□□□□ -0.8
ABCF3-213ENST00000480539 FABP9Q0Z7S8 132 aa10.04□□□□□ -0.8
ABCF3-213ENST00000480539 MRPL52Q86TS9 123 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms