RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
CDK9-203ENST00000480353 IGLV10-54A0A075B6I4 117 aa10.05□□□□□ -0.8
CDK9-203ENST00000480353 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
CDK9-203ENST00000480353 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
CDK9-203ENST00000480353 TRAV8-4A0A0B4J246 113 aa10.04□□□□□ -0.8
CDK9-203ENST00000480353 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
CDK9-203ENST00000480353 A0A1B0GVG6 124 aa10.04□□□□□ -0.8
CDK9-203ENST00000480353 NDUFS6O75380 124 aaKnown RBP10.04□□□□□ -0.8
CDK9-203ENST00000480353 APCSP02743 223 aa10.04□□□□□ -0.8
CDK9-203ENST00000480353 PLA2G1BP04054 148 aaKnown RBP10.04□□□□□ -0.8
CDK9-203ENST00000480353 LINC01551Q86U37 167 aa10.04□□□□□ -0.8
CDK9-203ENST00000480353 A0A1B0GUT8 65 aa10.03□□□□□ -0.8
CDK9-203ENST00000480353 SRP19P09132 144 aaKnown RBP10.03□□□□□ -0.8
CDK9-203ENST00000480353 PMCHP20382 165 aa10.03□□□□□ -0.8
CDK9-203ENST00000480353 C20orf203Q8NBC4 194 aa10.03□□□□□ -0.8
CDK9-203ENST00000480353 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
CDK9-203ENST00000480353 RPL39LQ96EH5 51 aaKnown RBP10.03□□□□□ -0.8
CDK9-203ENST00000480353 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 HIGD1CA8MV81 97 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 NCR2O95944 276 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 FOXA3P55318 350 aaPredicted RBP10.02□□□□□ -0.81
CDK9-203ENST00000480353 FAM74A3Q4VXF1 159 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 RNASEKQ6P5S7 137 aaKnown RBP10.02□□□□□ -0.81
CDK9-203ENST00000480353 Q6ZSA8 131 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 GFRA4Q9GZZ7 299 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 OSTCQ9NRP0 149 aa10.02□□□□□ -0.81
CDK9-203ENST00000480353 SDHAF1A6NFY7 115 aa10.01□□□□□ -0.81
CDK9-203ENST00000480353 TMEM241Q24JQ0 296 aa10.01□□□□□ -0.81
CDK9-203ENST00000480353 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
CDK9-203ENST00000480353 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
CDK9-203ENST00000480353 CLRN3Q8NCR9 226 aa10.01□□□□□ -0.81
CDK9-203ENST00000480353 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
CDK9-203ENST00000480353 hDV102S1A0JD36 115 aa10□□□□□ -0.81
CDK9-203ENST00000480353 FAM231BA6NCW3 169 aa10□□□□□ -0.81
CDK9-203ENST00000480353 I3L3M4 83 aa10□□□□□ -0.81
CDK9-203ENST00000480353 PRSS1P07477 247 aa10□□□□□ -0.81
CDK9-203ENST00000480353 RIGQ13278 110 aa10□□□□□ -0.81
CDK9-203ENST00000480353 PEA15Q15121 130 aa10□□□□□ -0.81
CDK9-203ENST00000480353 ADIRFQ15847 76 aa10□□□□□ -0.81
CDK9-203ENST00000480353 SCXQ7RTU7 201 aa10□□□□□ -0.81
CDK9-203ENST00000480353 BTF3L4Q96K17 158 aa10□□□□□ -0.81
CDK9-203ENST00000480353 ST20Q9HBF5 79 aa10□□□□□ -0.81
CDK9-203ENST00000480353 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
CDK9-203ENST00000480353 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
CDK9-203ENST00000480353 TMEM191AQ9H0A3 160 aa9.99□□□□□ -0.81
CDK9-203ENST00000480353 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
CDK9-203ENST00000480353 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
CDK9-203ENST00000480353 H7C423 109 aa9.98□□□□□ -0.81
CDK9-203ENST00000480353 NAT8Q9UHE5 227 aa9.98□□□□□ -0.81
CDK9-203ENST00000480353 VPS13BQ7Z7G8 4022 aa9.98□□□□□ -0.81
CDK9-203ENST00000480353 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.97□□□□□ -0.81
CDK9-203ENST00000480353 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
CDK9-203ENST00000480353 ISOC2Q96AB3 205 aa9.97□□□□□ -0.81
CDK9-203ENST00000480353 MRAP2Q96G30 205 aa9.97□□□□□ -0.81
CDK9-203ENST00000480353 NAT8BQ9UHF3 227 aa9.97□□□□□ -0.81
CDK9-203ENST00000480353 FGF6P10767 208 aa9.96□□□□□ -0.82
CDK9-203ENST00000480353 RPL23P62829 140 aaKnown RBP9.96□□□□□ -0.82
CDK9-203ENST00000480353 V9GYV3 84 aa9.96□□□□□ -0.82
CDK9-203ENST00000480353 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 PPP1R17O96001 155 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 ZNF25P17030 456 aaPredicted RBP9.95□□□□□ -0.82
CDK9-203ENST00000480353 KRTAP26-1Q6PEX3 210 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 AMN1Q8IY45 258 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 NUP35Q8NFH5 326 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 DPH3Q96FX2 82 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 TMEM242Q9NWH2 141 aa9.95□□□□□ -0.82
CDK9-203ENST00000480353 RAB4AP20338 218 aa9.94□□□□□ -0.82
CDK9-203ENST00000480353 FCER1GP30273 86 aa9.94□□□□□ -0.82
CDK9-203ENST00000480353 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
CDK9-203ENST00000480353 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
CDK9-203ENST00000480353 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
CDK9-203ENST00000480353 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
CDK9-203ENST00000480353 DNAH8Q96JB1 4490 aa9.93□□□□□ -0.82
CDK9-203ENST00000480353 IGHV3-64A0A075B6Q5 118 aa9.92□□□□□ -0.82
CDK9-203ENST00000480353 J3QL48 77 aa9.92□□□□□ -0.82
CDK9-203ENST00000480353 CHCHD10Q8WYQ3 142 aaPredicted RBP9.92□□□□□ -0.82
CDK9-203ENST00000480353 RNF185Q96GF1 192 aa9.92□□□□□ -0.82
CDK9-203ENST00000480353 KIR2DL4Q99706 377 aa9.92□□□□□ -0.82
CDK9-203ENST00000480353 C7orf77A4D0Y5 90 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 VCYO14598 125 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 GAS8-AS1O95177 125 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 TSHBP01222 138 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 CAMPP49913 170 aa9.91□□□□□ -0.82
CDK9-203ENST00000480353 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
CDK9-203ENST00000480353 A0A1B0GW15 77 aa9.9□□□□□ -0.82
CDK9-203ENST00000480353 C9JQL5 133 aa9.9□□□□□ -0.82
CDK9-203ENST00000480353 S100A8P05109 93 aa9.9□□□□□ -0.82
CDK9-203ENST00000480353 RPS10P46783 165 aaKnown RBP9.9□□□□□ -0.82
CDK9-203ENST00000480353 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.82
CDK9-203ENST00000480353 SS18Q15532 418 aa9.9□□□□□ -0.82
CDK9-203ENST00000480353 FAT1Q14517 4588 aa9.89□□□□□ -0.83
CDK9-203ENST00000480353 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
CDK9-203ENST00000480353 TRBV27A0A0K0K1C4 114 aa9.89□□□□□ -0.83
CDK9-203ENST00000480353 XCL1P47992 114 aa9.89□□□□□ -0.83
CDK9-203ENST00000480353 POLR2KP53803 58 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms