RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	MT-ND6	P03923	174 aa		10.54	□□□□□ -0.72
HDLBP-238	ENST00000479894	PLA2G1B	P04054	148 aa	Known RBP	10.54	□□□□□ -0.72
HDLBP-238	ENST00000479894	RAB4A	P20338	218 aa		10.54	□□□□□ -0.72
HDLBP-238	ENST00000479894	URGCP-MRPS24	S4R325	110 aa		10.54	□□□□□ -0.72
HDLBP-238	ENST00000479894	GAGE12J	A6NER3	117 aa		10.53	□□□□□ -0.72
HDLBP-238	ENST00000479894	GAGE1	Q13065	139 aa		10.53	□□□□□ -0.72
HDLBP-238	ENST00000479894	GAGE4	Q13068	117 aa		10.53	□□□□□ -0.72
HDLBP-238	ENST00000479894	GAGE5	Q13069	117 aa		10.53	□□□□□ -0.72
HDLBP-238	ENST00000479894	GAGE13	Q4V321	117 aa		10.53	□□□□□ -0.72
HDLBP-238	ENST00000479894	GTSF1L	Q9H1H1	148 aa		10.53	□□□□□ -0.72
HDLBP-238	ENST00000479894	TRBV24-1	A0A075B6N3	115 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	SIVA1	O15304	175 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	HLA-DQA1	P01909	254 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	DNAH10OS	P0CZ25	163 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	CKS2	P33552	79 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	AMN1	Q8IY45	258 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	GNB1L	Q9BYB4	327 aa		10.52	□□□□□ -0.73
HDLBP-238	ENST00000479894	TRAV8-6	A0A0B4J262	113 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	PHOX2A	O14813	284 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	UBE2D3	P61077	147 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	UBE2D2	P62837	147 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	HAMP	P81172	84 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	OR10J3	Q5JRS4	329 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	LYPD5	Q6UWN5	251 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	NEXN-AS1	Q8NBZ9	246 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	ST20	Q9HBF5	79 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	LAMTOR2	Q9Y2Q5	125 aa		10.51	□□□□□ -0.73
HDLBP-238	ENST00000479894	LRP1	Q07954	4544 aa	Known RBP	10.5	□□□□□ -0.73
HDLBP-238	ENST00000479894	TRBV6-5	A0A0K0K1A5	114 aa		10.5	□□□□□ -0.73
HDLBP-238	ENST00000479894	TCAP	O15273	167 aa		10.5	□□□□□ -0.73
HDLBP-238	ENST00000479894	PKIA	P61925	76 aa		10.5	□□□□□ -0.73
HDLBP-238	ENST00000479894	ORMDL3	Q8N138	153 aa		10.5	□□□□□ -0.73
HDLBP-238	ENST00000479894	RNF185	Q96GF1	192 aa		10.5	□□□□□ -0.73
HDLBP-238	ENST00000479894	LOC100131303	A0A0U1RQF7	123 aa		10.49	□□□□□ -0.73
HDLBP-238	ENST00000479894	LINC00694	P0DN24	101 aa		10.49	□□□□□ -0.73
HDLBP-238	ENST00000479894	ELOB	Q15370	118 aa		10.49	□□□□□ -0.73
HDLBP-238	ENST00000479894	MRPL51	Q4U2R6	128 aa	Known RBP	10.49	□□□□□ -0.73
HDLBP-238	ENST00000479894	C20orf78	Q9BR46	151 aa		10.49	□□□□□ -0.73
HDLBP-238	ENST00000479894	TRAV26-2	A0A0B4J265	109 aa		10.48	□□□□□ -0.73
HDLBP-238	ENST00000479894		K7EP13	123 aa		10.48	□□□□□ -0.73
HDLBP-238	ENST00000479894	APCS	P02743	223 aa		10.48	□□□□□ -0.73
HDLBP-238	ENST00000479894	LELP1	Q5T871	98 aa		10.48	□□□□□ -0.73
HDLBP-238	ENST00000479894	TMEM136	Q6ZRR5	245 aa		10.48	□□□□□ -0.73
HDLBP-238	ENST00000479894	TRAV9-2	A0A087WT02	112 aa		10.47	□□□□□ -0.73
HDLBP-238	ENST00000479894	VCY	O14598	125 aa		10.47	□□□□□ -0.73
HDLBP-238	ENST00000479894	NCR2	O95944	276 aa		10.47	□□□□□ -0.73
HDLBP-238	ENST00000479894	OXT	P01178	125 aa		10.47	□□□□□ -0.73
HDLBP-238	ENST00000479894	COTL1	Q14019	142 aa		10.47	□□□□□ -0.73
HDLBP-238	ENST00000479894		D6R8Y8	96 aa		10.46	□□□□□ -0.73
HDLBP-238	ENST00000479894		I3L3M4	83 aa		10.46	□□□□□ -0.73
HDLBP-238	ENST00000479894	PMCH	P20382	165 aa		10.46	□□□□□ -0.73
HDLBP-238	ENST00000479894	ATRAID	Q6UW56	229 aa		10.46	□□□□□ -0.73
HDLBP-238	ENST00000479894	NTN5	Q8WTR8	489 aa	Predicted RBP	10.46	□□□□□ -0.73
HDLBP-238	ENST00000479894	PRELID3A	Q96N28	172 aa		10.46	□□□□□ -0.73
HDLBP-238	ENST00000479894	TRBV25-1	A0A075B6N4	114 aa		10.45	□□□□□ -0.74
HDLBP-238	ENST00000479894	SDHAF1	A6NFY7	115 aa		10.45	□□□□□ -0.74
HDLBP-238	ENST00000479894	SUMO2	P61956	95 aa	Known RBP	10.45	□□□□□ -0.74
HDLBP-238	ENST00000479894	RPL32	P62910	135 aa	Known RBP	10.45	□□□□□ -0.74
HDLBP-238	ENST00000479894	KIR2DL4	Q99706	377 aa		10.45	□□□□□ -0.74
HDLBP-238	ENST00000479894	DNAH8	Q96JB1	4490 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	IGLV5-52	A0A0A0MRZ9	124 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	TRBV6-8	A0A0A6YYG3	113 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	TNFRSF6B	O95407	300 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	SMAGP	Q0VAQ4	97 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	FABP9	Q0Z7S8	132 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	RPL39L	Q96EH5	51 aa	Known RBP	10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	TRAPPC1	Q9Y5R8	145 aa		10.44	□□□□□ -0.74
HDLBP-238	ENST00000479894	FAT3	Q8TDW7	4589 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	IGHV1-24	A0A0C4DH33	117 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	TRBV27	A0A0K0K1C4	114 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	CBLN2	Q8IUK8	224 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	CHCHD7	Q9BUK0	85 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	MRPL18	Q9H0U6	180 aa	Known RBP	10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	MAP1LC3A	Q9H492	121 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894		Q9UF83	564 aa		10.43	□□□□□ -0.74
HDLBP-238	ENST00000479894	ATP6V1G1	O75348	118 aa		10.42	□□□□□ -0.74
HDLBP-238	ENST00000479894	FCER1G	P30273	86 aa		10.42	□□□□□ -0.74
HDLBP-238	ENST00000479894	POLR2K	P53803	58 aa	Known RBP	10.42	□□□□□ -0.74
HDLBP-238	ENST00000479894	C10orf126	Q8N4M7	172 aa		10.42	□□□□□ -0.74
HDLBP-238	ENST00000479894	NRAC	Q8N912	160 aa		10.42	□□□□□ -0.74
HDLBP-238	ENST00000479894	IGHV3-38	A0A0C4DH36	116 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	PRSS47	A8MTI9	375 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	SMKR1	H3BMG3	65 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894		H7C423	109 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894		K7EMI3	77 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	RAB5A	P20339	215 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	G0S2	P27469	103 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	RPS10	P46783	165 aa	Known RBP	10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	AMT	P48728	403 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	IQCJ	Q1A5X6	159 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	LINC00528	Q8N1L1	170 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894	FAM30A	Q9NZY2	134 aa		10.41	□□□□□ -0.74
HDLBP-238	ENST00000479894		A0A087WX48	190 aa		10.4	□□□□□ -0.74
HDLBP-238	ENST00000479894	UBE2L6	O14933	153 aa		10.4	□□□□□ -0.74
HDLBP-238	ENST00000479894	TMEM18	Q96B42	140 aa		10.4	□□□□□ -0.74
HDLBP-238	ENST00000479894	YPEL4	Q96NS1	127 aa		10.4	□□□□□ -0.74
HDLBP-238	ENST00000479894	CHCHD5	Q9BSY4	110 aa		10.4	□□□□□ -0.74
HDLBP-238	ENST00000479894	TMEM243	Q9BU79	118 aa		10.4	□□□□□ -0.74
HDLBP-238	ENST00000479894	NXT2	Q9NPJ8	142 aa	Known RBP	10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms