RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 LINC00643Q86TS7 51 aa14.77□□□□□ -0.04
ABCA2-217ENST00000479446 PDE6GP18545 87 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 CRIP1P50238 77 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 LY6LH3BQJ8 138 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 HIST2H2BDQ6DRA6 164 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 ADAMTS9Q9P2N4 1935 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 Q6ZTI0 123 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 ZFAND3Q9H8U3 227 aa14.77□□□□□ -0.05
ABCA2-217ENST00000479446 DSCAML1Q8TD84 2053 aa14.76□□□□□ -0.05
ABCA2-217ENST00000479446 LTBP2Q14767 1821 aa14.76□□□□□ -0.05
ABCA2-217ENST00000479446 PCDH15Q96QU1 1955 aa14.76□□□□□ -0.05
ABCA2-217ENST00000479446 C20orf173Q96LM9 149 aa14.76□□□□□ -0.05
ABCA2-217ENST00000479446 HIGD2BQ4VC39 106 aa14.75□□□□□ -0.05
ABCA2-217ENST00000479446 ZFAND2AQ8N6M9 145 aa14.75□□□□□ -0.05
ABCA2-217ENST00000479446 KIAA1549LQ6ZVL6 1849 aa14.75□□□□□ -0.05
ABCA2-217ENST00000479446 DNAJC9-AS1A6NH13 148 aa14.75□□□□□ -0.05
ABCA2-217ENST00000479446 U3KQK5 164 aa14.75□□□□□ -0.05
ABCA2-217ENST00000479446 PTPN13Q12923 2485 aa14.74□□□□□ -0.05
ABCA2-217ENST00000479446 J3KT08 172 aa14.74□□□□□ -0.05
ABCA2-217ENST00000479446 ZNF22P17026 224 aaPredicted RBP14.74□□□□□ -0.05
ABCA2-217ENST00000479446 PLXNB1O43157 2135 aa14.74□□□□□ -0.05
ABCA2-217ENST00000479446 PCNX3Q9H6A9 2034 aa14.74□□□□□ -0.05
ABCA2-217ENST00000479446 TP73-AS1Q9UF72 201 aa14.73□□□□□ -0.05
ABCA2-217ENST00000479446 CDKN2A-AS1Q9UH64 79 aa14.73□□□□□ -0.05
ABCA2-217ENST00000479446 SORL1Q92673 2214 aa14.73□□□□□ -0.05
ABCA2-217ENST00000479446 C14orf132Q9NPU4 83 aa14.73□□□□□ -0.05
ABCA2-217ENST00000479446 LINC00467Q9BRT7 94 aa14.73□□□□□ -0.05
ABCA2-217ENST00000479446 IGLV4-3A0A075B6K6 122 aa14.72□□□□□ -0.05
ABCA2-217ENST00000479446 SMAD5-AS1Q9Y6J3 95 aa14.72□□□□□ -0.05
ABCA2-217ENST00000479446 RNF185Q96GF1 192 aa14.72□□□□□ -0.05
ABCA2-217ENST00000479446 OTOGLQ3ZCN5 2332 aa14.72□□□□□ -0.05
ABCA2-217ENST00000479446 COX7BP24311 80 aa14.72□□□□□ -0.05
ABCA2-217ENST00000479446 SPANXB1Q9NS25 103 aaPredicted RBP14.72□□□□□ -0.05
ABCA2-217ENST00000479446 TMEM223A0PJW6 202 aa14.71□□□□□ -0.05
ABCA2-217ENST00000479446 TNRC6BQ9UPQ9 1833 aaKnown RBP14.71□□□□□ -0.05
ABCA2-217ENST00000479446 IGKV2D-26A0A0A0MRZ7 120 aa14.71□□□□□ -0.05
ABCA2-217ENST00000479446 UBE2AP49459 152 aa14.71□□□□□ -0.06
ABCA2-217ENST00000479446 DEFB114Q30KQ6 69 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 MYO18BQ8IUG5 2567 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 IGLV2-11P01706 119 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 UFSP1Q6NVU6 142 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 ALPK3Q96L96 1907 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 Q6YL49 198 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 WFDC9Q8NEX5 89 aa14.7□□□□□ -0.06
ABCA2-217ENST00000479446 MAPKAPK5-AS1Q8N8E1 139 aa14.69□□□□□ -0.06
ABCA2-217ENST00000479446 TRAV26-1A0A087WT03 109 aa14.69□□□□□ -0.06
ABCA2-217ENST00000479446 C19orf84I3L1E1 186 aa14.69□□□□□ -0.06
ABCA2-217ENST00000479446 M0QY20 66 aa14.69□□□□□ -0.06
ABCA2-217ENST00000479446 C5orf47Q569G3 176 aa14.69□□□□□ -0.06
ABCA2-217ENST00000479446 H7C423 109 aa14.68□□□□□ -0.06
ABCA2-217ENST00000479446 LINC00269Q8N2A0 174 aa14.67□□□□□ -0.06
ABCA2-217ENST00000479446 C2CD3Q4AC94 2353 aa14.67□□□□□ -0.06
ABCA2-217ENST00000479446 REG3AQ06141 175 aa14.67□□□□□ -0.06
ABCA2-217ENST00000479446 TEX49A0A1B0GTD5 131 aa14.67□□□□□ -0.06
ABCA2-217ENST00000479446 LRRC75A-AS1Q8N1F1 130 aa14.66□□□□□ -0.06
ABCA2-217ENST00000479446 SMIM9A6NGZ8 99 aa14.65□□□□□ -0.06
ABCA2-217ENST00000479446 LINC00308Q8TCZ7 52 aa14.65□□□□□ -0.06
ABCA2-217ENST00000479446 TRBV27A0A0K0K1C4 114 aa14.65□□□□□ -0.06
ABCA2-217ENST00000479446 MT-ATP8P03928 68 aa14.64□□□□□ -0.07
ABCA2-217ENST00000479446 CFAP126Q5VTH2 177 aa14.64□□□□□ -0.07
ABCA2-217ENST00000479446 FAM222AQ5U5X8 452 aa14.64□□□□□ -0.07
ABCA2-217ENST00000479446 LYRM9A8MSI8 78 aa14.63□□□□□ -0.07
ABCA2-217ENST00000479446 IGHV4-31P0DP07 118 aa14.63□□□□□ -0.07
ABCA2-217ENST00000479446 TRBV6-5A0A0K0K1A5 114 aa14.63□□□□□ -0.07
ABCA2-217ENST00000479446 IBA57-AS1B1ANH7 110 aa14.63□□□□□ -0.07
ABCA2-217ENST00000479446 C11orf71Q6IPW1 123 aa14.63□□□□□ -0.07
ABCA2-217ENST00000479446 CHCHD10Q8WYQ3 142 aaPredicted RBP14.63□□□□□ -0.07
ABCA2-217ENST00000479446 NDUFV3P56181 108 aaKnown RBP14.62□□□□□ -0.07
ABCA2-217ENST00000479446 TRBV30A0A0K0K1B3 111 aa14.62□□□□□ -0.07
ABCA2-217ENST00000479446 CHKB-CPT1BH3BT56 60 aa14.62□□□□□ -0.07
ABCA2-217ENST00000479446 PRB2P02812 416 aaPredicted RBP14.62□□□□□ -0.07
ABCA2-217ENST00000479446 PYGO1Q9Y3Y4 419 aa14.62□□□□□ -0.07
ABCA2-217ENST00000479446 TRIAP1O43715 76 aa14.61□□□□□ -0.07
ABCA2-217ENST00000479446 RNF183Q96D59 192 aa14.61□□□□□ -0.07
ABCA2-217ENST00000479446 PRORYQ9H606 182 aa14.61□□□□□ -0.07
ABCA2-217ENST00000479446 NAV3Q8IVL0 2385 aa14.61□□□□□ -0.07
ABCA2-217ENST00000479446 Q8N6K4 173 aa14.61□□□□□ -0.07
ABCA2-217ENST00000479446 NDUFC2O95298 119 aa14.6□□□□□ -0.07
ABCA2-217ENST00000479446 NRACQ8N912 160 aa14.6□□□□□ -0.07
ABCA2-217ENST00000479446 WFDC11Q8NEX6 87 aa14.6□□□□□ -0.07
ABCA2-217ENST00000479446 UPK3BQ9BT76 320 aa14.6□□□□□ -0.07
ABCA2-217ENST00000479446 NAV2Q8IVL1 2488 aa14.6□□□□□ -0.07
ABCA2-217ENST00000479446 TRAV23DV6A0A075B6W5 121 aa14.59□□□□□ -0.07
ABCA2-217ENST00000479446 COL4A4P53420 1690 aaPredicted RBP14.59□□□□□ -0.07
ABCA2-217ENST00000479446 BPY2O14599 106 aa14.59□□□□□ -0.07
ABCA2-217ENST00000479446 TRBV6-4A0A1B0GX49 114 aa14.58□□□□□ -0.07
ABCA2-217ENST00000479446 KIAA1549Q9HCM3 1950 aa14.58□□□□□ -0.08
ABCA2-217ENST00000479446 TRBV6-8A0A0A6YYG3 113 aa14.58□□□□□ -0.08
ABCA2-217ENST00000479446 PIK3CD-AS1Q5SR53 167 aa14.58□□□□□ -0.08
ABCA2-217ENST00000479446 C2orf91Q6ZV80 131 aa14.58□□□□□ -0.08
ABCA2-217ENST00000479446 C11orf45Q8TAV5 145 aa14.57□□□□□ -0.08
ABCA2-217ENST00000479446 RNASE3P12724 160 aaKnown RBP14.57□□□□□ -0.08
ABCA2-217ENST00000479446 FAM110AQ9BQ89 295 aa14.57□□□□□ -0.08
ABCA2-217ENST00000479446 C11orf21Q9P2W6 132 aa14.56□□□□□ -0.08
ABCA2-217ENST00000479446 PROK1P58294 105 aa14.56□□□□□ -0.08
ABCA2-217ENST00000479446 C10orf99Q6UWK7 81 aa14.56□□□□□ -0.08
ABCA2-217ENST00000479446 DSCAMO60469 2012 aa14.55□□□□□ -0.08
ABCA2-217ENST00000479446 KLK5Q9Y337 293 aaPredicted RBP14.55□□□□□ -0.08
ABCA2-217ENST00000479446 NUP210LQ5VU65 1888 aa14.55□□□□□ -0.08
ABCA2-217ENST00000479446 UQCRQO14949 82 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms