RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 MAP1LC3B2A6NCE7 125 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 UMAD1C9J7I0 102 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 F8W036 122 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 SMIM17P0DL12 118 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 SPANXN1Q5VSR9 72 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 CST9LP1Q5W188 147 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 LINC01600Q96MT4 127 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 MAP1LC3BQ9GZQ8 125 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 PLAC8Q9NZF1 115 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 KIF25-AS1Q9Y6Z4 181 aa6.11□□□□□ -1.43
CCM2-210ENST00000478169 SLPIP03973 132 aa6.1□□□□□ -1.43
CCM2-210ENST00000478169 CHTF8P0CG12 524 aa6.1□□□□□ -1.43
CCM2-210ENST00000478169 SULT1A2P50226 295 aa6.1□□□□□ -1.43
CCM2-210ENST00000478169 C20orf203Q8NBC4 194 aa6.1□□□□□ -1.43
CCM2-210ENST00000478169 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
CCM2-210ENST00000478169 CARHSP1Q9Y2V2 147 aaKnown RBP6.1□□□□□ -1.43
CCM2-210ENST00000478169 MUC21A0A0G2JKD1 596 aa6.09□□□□□ -1.43
CCM2-210ENST00000478169 MUC21A0A140T8X8 626 aa6.09□□□□□ -1.43
CCM2-210ENST00000478169 H7C1H1 209 aa6.09□□□□□ -1.43
CCM2-210ENST00000478169 PHOX2AO14813 284 aa6.09□□□□□ -1.43
CCM2-210ENST00000478169 AP1S3Q96PC3 154 aa6.09□□□□□ -1.43
CCM2-210ENST00000478169 LOC105371267A0A1B0GV96 52 aa6.08□□□□□ -1.44
CCM2-210ENST00000478169 M0QY20 66 aa6.08□□□□□ -1.44
CCM2-210ENST00000478169 CFAP161Q6P656 301 aa6.08□□□□□ -1.44
CCM2-210ENST00000478169 BAGE2Q86Y30 109 aa6.08□□□□□ -1.44
CCM2-210ENST00000478169 TMEM243Q9BU79 118 aa6.08□□□□□ -1.44
CCM2-210ENST00000478169 SMCO4Q9NRQ5 59 aa6.08□□□□□ -1.44
CCM2-210ENST00000478169 IGLV4-60A0A075B6I1 120 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 PAGE4O60829 102 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 SSTP61278 116 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 PRR3P79522 188 aaKnown RBP6.07□□□□□ -1.44
CCM2-210ENST00000478169 COX6A2Q02221 97 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 C10orf91Q5T1B1 145 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 WDR73Q6P4I2 378 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 GFRA4Q9GZZ7 299 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 BIN3Q9NQY0 253 aa6.07□□□□□ -1.44
CCM2-210ENST00000478169 A0A0J9YXV3 536 aa6.06□□□□□ -1.44
CCM2-210ENST00000478169 NDUFS6O75380 124 aaKnown RBP6.06□□□□□ -1.44
CCM2-210ENST00000478169 TAGLN2P37802 199 aaKnown RBP6.06□□□□□ -1.44
CCM2-210ENST00000478169 RPS10P46783 165 aaKnown RBP6.06□□□□□ -1.44
CCM2-210ENST00000478169 RAB5BP61020 215 aa6.06□□□□□ -1.44
CCM2-210ENST00000478169 C15orf56Q8N910 161 aa6.06□□□□□ -1.44
CCM2-210ENST00000478169 GTSF1Q8WW33 167 aa6.06□□□□□ -1.44
CCM2-210ENST00000478169 PGLYRP4Q96LB8 373 aa6.06□□□□□ -1.44
CCM2-210ENST00000478169 CYTL1Q9NRR1 136 aa6.06□□□□□ -1.44
CCM2-210ENST00000478169 SCO2A0A1W2PP80 73 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 SCO1O75880 301 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 MGPP08493 103 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 RHEBQ15382 184 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 MAJINQ3KP22 176 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 SUMO4Q6EEV6 95 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 RASL11AQ6T310 242 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 SPINK6Q6UWN8 80 aa6.05□□□□□ -1.44
CCM2-210ENST00000478169 GAGE12HA6NDE8 117 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 UBE2L6O14933 153 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 IFNA1P01562 189 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 S100A6P06703 90 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 H2AFB1P0C5Y9 115 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 IGLC6P0CF74 106 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 RPS20P60866 119 aaKnown RBP6.04□□□□□ -1.44
CCM2-210ENST00000478169 CACNG7P62955 275 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 REG3GQ6UW15 175 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 STPG4Q8N801 248 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 PRSS3P2Q8NHM4 247 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 LYPD6BQ8NI32 183 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 SFT2D1Q8WV19 159 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 MBD3L1Q8WWY6 194 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 EIF5A2Q9GZV4 153 aaKnown RBP6.04□□□□□ -1.44
CCM2-210ENST00000478169 NIT2Q9NQR4 276 aa6.04□□□□□ -1.44
CCM2-210ENST00000478169 IGKV2-24A0A0C4DH68 120 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 C1orf196B1AJZ1 125 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 MT-ND4LP03901 98 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 COTL1Q14019 142 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 FER1L6-AS1Q8NA97 138 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 TPPP3Q9BW30 176 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 LINC00474Q9P2X8 69 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 PKIGQ9Y2B9 76 aa6.03□□□□□ -1.44
CCM2-210ENST00000478169 GVQW2A0A096LPI5 108 aaPredicted RBP6.02□□□□□ -1.45
CCM2-210ENST00000478169 F2Z2F3 143 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 S100A8P05109 93 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 TRGC1P0CF51 173 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 RPL35P42766 123 aaKnown RBP6.02□□□□□ -1.45
CCM2-210ENST00000478169 AMTP48728 403 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 S100A12P80511 92 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 ODF1Q14990 250 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 HIGD2BQ4VC39 106 aa6.02□□□□□ -1.45
CCM2-210ENST00000478169 A0A096LNI7 61 aa6.01□□□□□ -1.45
CCM2-210ENST00000478169 IGKV3OR2-268A0A0C4DH90 116 aa6.01□□□□□ -1.45
CCM2-210ENST00000478169 XKRY2A2RUG3 117 aa6.01□□□□□ -1.45
CCM2-210ENST00000478169 PNRC1Q12796 327 aaPredicted RBP6.01□□□□□ -1.45
CCM2-210ENST00000478169 SRSF9Q13242 221 aaKnown RBP eCLIP6.01□□□□□ -1.45
CCM2-210ENST00000478169 OR2D3Q8NGH3 330 aa6.01□□□□□ -1.45
CCM2-210ENST00000478169 FAM213BQ8TBF2 198 aa6.01□□□□□ -1.45
CCM2-210ENST00000478169 CHCHD10Q8WYQ3 142 aaPredicted RBP6.01□□□□□ -1.45
CCM2-210ENST00000478169 BTF3L4Q96K17 158 aa6.01□□□□□ -1.45
CCM2-210ENST00000478169 A0A1B0GV50 99 aa6□□□□□ -1.45
CCM2-210ENST00000478169 C19orf71A6NCJ1 209 aa6□□□□□ -1.45
CCM2-210ENST00000478169 H7C423 109 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms