RNA–Protein interactions for RNA: ENST00000477119.1

APTX-221, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-221ENST00000477119 AMTP48728 403 aa8.64□□□□□ -1.03
APTX-221ENST00000477119 COTL1Q14019 142 aa8.64□□□□□ -1.03
APTX-221ENST00000477119 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
APTX-221ENST00000477119 PGLYRP4Q96LB8 373 aa8.64□□□□□ -1.03
APTX-221ENST00000477119 GFRA4Q9GZZ7 299 aa8.64□□□□□ -1.03
APTX-221ENST00000477119 RPP21Q9H633 154 aaKnown RBP8.64□□□□□ -1.03
APTX-221ENST00000477119 hDV102S1A0JD36 115 aa8.63□□□□□ -1.03
APTX-221ENST00000477119 K7EN84 100 aa8.63□□□□□ -1.03
APTX-221ENST00000477119 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
APTX-221ENST00000477119 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
APTX-221ENST00000477119 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
APTX-221ENST00000477119 TRAV26-2A0A0B4J265 109 aa8.62□□□□□ -1.03
APTX-221ENST00000477119 RPL37AP61513 92 aaKnown RBP8.62□□□□□ -1.03
APTX-221ENST00000477119 CNFNQ9BYD5 112 aa8.62□□□□□ -1.03
APTX-221ENST00000477119 PANO1I0J062 215 aa8.61□□□□□ -1.03
APTX-221ENST00000477119 GTSF1Q8WW33 167 aa8.61□□□□□ -1.03
APTX-221ENST00000477119 FOXA3P55318 350 aaPredicted RBP8.6□□□□□ -1.03
APTX-221ENST00000477119 CNBPP62633 177 aaKnown RBP8.6□□□□□ -1.03
APTX-221ENST00000477119 SMIM15Q7Z3B0 74 aa8.6□□□□□ -1.03
APTX-221ENST00000477119 RPL39LQ96EH5 51 aaKnown RBP8.6□□□□□ -1.03
APTX-221ENST00000477119 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
APTX-221ENST00000477119 AP5S1Q9NUS5 200 aa8.6□□□□□ -1.03
APTX-221ENST00000477119 IGKV3OR2-268A0A0C4DH90 116 aa8.59□□□□□ -1.03
APTX-221ENST00000477119 GATCO43716 136 aaKnown RBP8.59□□□□□ -1.03
APTX-221ENST00000477119 ALKAL2Q6UX46 152 aa8.59□□□□□ -1.03
APTX-221ENST00000477119 Q6ZNX1 250 aa8.59□□□□□ -1.03
APTX-221ENST00000477119 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
APTX-221ENST00000477119 GAGE12HA6NDE8 117 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 OXTP01178 125 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 SLPIP03973 132 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 CEBPGP53567 150 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 BLOC1S1P78537 153 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 AMMECR1LQ6DCA0 310 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 AKAP14Q86UN6 197 aa8.58□□□□□ -1.04
APTX-221ENST00000477119 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
APTX-221ENST00000477119 A8MWL6 223 aa8.57□□□□□ -1.04
APTX-221ENST00000477119 TMEM250H0YL14 139 aa8.57□□□□□ -1.04
APTX-221ENST00000477119 NCR2O95944 276 aa8.57□□□□□ -1.04
APTX-221ENST00000477119 TEX261Q6UWH6 196 aa8.57□□□□□ -1.04
APTX-221ENST00000477119 hCG_2014768A0A024R1R8 64 aa8.56□□□□□ -1.04
APTX-221ENST00000477119 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.56□□□□□ -1.04
APTX-221ENST00000477119 IGKV2-29A2NJV5 120 aaPredicted RBP8.56□□□□□ -1.04
APTX-221ENST00000477119 HNRNPA3P51991 378 aaKnown RBP8.56□□□□□ -1.04
APTX-221ENST00000477119 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
APTX-221ENST00000477119 CFAP161Q6P656 301 aa8.56□□□□□ -1.04
APTX-221ENST00000477119 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
APTX-221ENST00000477119 LRP1Q07954 4544 aaKnown RBP8.55□□□□□ -1.04
APTX-221ENST00000477119 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 APCSP02743 223 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 CHTF8P0CG12 524 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 FGF6P10767 208 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 PMCHP20382 165 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 CIRBPQ14011 172 aaKnown RBP8.55□□□□□ -1.04
APTX-221ENST00000477119 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
APTX-221ENST00000477119 BORCS7Q96B45 105 aa8.55□□□□□ -1.04
APTX-221ENST00000477119 H7C423 109 aa8.54□□□□□ -1.04
APTX-221ENST00000477119 I3L3M4 83 aa8.54□□□□□ -1.04
APTX-221ENST00000477119 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
APTX-221ENST00000477119 SERTAD4-AS1Q5TG53 156 aa8.54□□□□□ -1.04
APTX-221ENST00000477119 LYPD6BQ8NI32 183 aa8.54□□□□□ -1.04
APTX-221ENST00000477119 EIF5A2Q9GZV4 153 aaKnown RBP8.54□□□□□ -1.04
APTX-221ENST00000477119 A0A087WYN8 130 aa8.53□□□□□ -1.04
APTX-221ENST00000477119 GAS8-AS1O95177 125 aa8.53□□□□□ -1.04
APTX-221ENST00000477119 CT83Q5H943 113 aa8.53□□□□□ -1.04
APTX-221ENST00000477119 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
APTX-221ENST00000477119 TRBV6-5A0A0K0K1A5 114 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 FAM231BA6NCW3 169 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 RPS10P46783 165 aaKnown RBP8.52□□□□□ -1.05
APTX-221ENST00000477119 COX6A2Q02221 97 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 SPACA4Q8TDM5 124 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 RNF185Q96GF1 192 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 BTF3L4Q96K17 158 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 ST20Q9HBF5 79 aa8.52□□□□□ -1.05
APTX-221ENST00000477119 A0A1B0GUT8 65 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 ZNF727A8MUV8 499 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 HIGD1CA8MV81 97 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 LINC01551Q86U37 167 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 OR5A1Q8NGJ0 315 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 TMEM101Q96IK0 257 aa8.51□□□□□ -1.05
APTX-221ENST00000477119 TSHBP01222 138 aa8.5□□□□□ -1.05
APTX-221ENST00000477119 ESDP10768 282 aa8.5□□□□□ -1.05
APTX-221ENST00000477119 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
APTX-221ENST00000477119 XCL1P47992 114 aa8.5□□□□□ -1.05
APTX-221ENST00000477119 FOXI1Q12951 378 aa8.5□□□□□ -1.05
APTX-221ENST00000477119 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
APTX-221ENST00000477119 TMEM242Q9NWH2 141 aa8.5□□□□□ -1.05
APTX-221ENST00000477119 FAT3Q8TDW7 4589 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
APTX-221ENST00000477119 LINC00959A0A1B0GUT2 108 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 RAB4AP20338 218 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 PRSS3P2Q8NHM4 247 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 FAM210AQ96ND0 272 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 OSTCQ9NRP0 149 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
APTX-221ENST00000477119 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
APTX-221ENST00000477119 CCL25O15444 150 aa8.48□□□□□ -1.05
APTX-221ENST00000477119 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms