RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 GAGE13Q4V321 117 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 DEFB121Q5J5C9 76 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 VAMP8Q9BV40 100 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 HHLA3Q9XRX5 114 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 UBE2D3P61077 147 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 UBE2D2P62837 147 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 PMCHL2Q9BQD1 86 aa10.16□□□□□ -0.78
COL4A6-206ENST00000477085 HUWE1Q7Z6Z7 4374 aaKnown RBP10.15□□□□□ -0.78
COL4A6-206ENST00000477085 CRYBA4P53673 196 aa10.15□□□□□ -0.78
COL4A6-206ENST00000477085 DAD1P61803 113 aa10.15□□□□□ -0.78
COL4A6-206ENST00000477085 RHOHQ15669 191 aa10.15□□□□□ -0.78
COL4A6-206ENST00000477085 PET117Q6UWS5 81 aa10.15□□□□□ -0.78
COL4A6-206ENST00000477085 ATOH7Q8N100 152 aa10.15□□□□□ -0.78
COL4A6-206ENST00000477085 C14orf144Q96I85 54 aa10.15□□□□□ -0.78
COL4A6-206ENST00000477085 IGIPA6NJ69 53 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 RPL36AP83881 106 aaKnown RBP10.14□□□□□ -0.79
COL4A6-206ENST00000477085 LINC01545Q5VT33 79 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 MRAPQ8TCY5 172 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 RPL36ALQ969Q0 106 aaKnown RBP10.14□□□□□ -0.79
COL4A6-206ENST00000477085 SCGB3A1Q96QR1 104 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 CHCHD7Q9BUK0 85 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 C12orf74Q32Q52 190 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 C20orf203Q8NBC4 194 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 TM2D3Q9BRN9 247 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 CYSLTR1Q9Y271 337 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 PAM16Q9Y3D7 125 aa10.14□□□□□ -0.79
COL4A6-206ENST00000477085 ATP5LO75964 103 aa10.13□□□□□ -0.79
COL4A6-206ENST00000477085 MAJINQ3KP22 176 aa10.13□□□□□ -0.79
COL4A6-206ENST00000477085 ZMAT4Q9H898 229 aa10.13□□□□□ -0.79
COL4A6-206ENST00000477085 ERASQ7Z444 233 aa10.12□□□□□ -0.79
COL4A6-206ENST00000477085 VSIG2Q96IQ7 327 aa10.12□□□□□ -0.79
COL4A6-206ENST00000477085 A0A0J9YWU9 116 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 FAM104AQ969W3 186 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-206ENST00000477085 PRADC1Q9BSG0 188 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 C11orf68Q9H3H3 251 aaKnown RBP10.11□□□□□ -0.79
COL4A6-206ENST00000477085 PRO0255Q9UI72 69 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.11□□□□□ -0.79
COL4A6-206ENST00000477085 PRSS1P07477 247 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 COTL1Q14019 142 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 ODF1Q14990 250 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 ZC2HC1BQ5TFG8 222 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 DAZ4Q86SG3 579 aaKnown RBP10.11□□□□□ -0.79
COL4A6-206ENST00000477085 BAALCQ8WXS3 180 aa10.11□□□□□ -0.79
COL4A6-206ENST00000477085 DAZ3Q9NR90 486 aaKnown RBP10.11□□□□□ -0.79
COL4A6-206ENST00000477085 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-206ENST00000477085 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
COL4A6-206ENST00000477085 ATP5G1P05496 136 aa10.1□□□□□ -0.79
COL4A6-206ENST00000477085 GYPEP15421 78 aa10.1□□□□□ -0.79
COL4A6-206ENST00000477085 G0S2P27469 103 aa10.1□□□□□ -0.79
COL4A6-206ENST00000477085 SPATA45Q537H7 98 aa10.1□□□□□ -0.79
COL4A6-206ENST00000477085 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
COL4A6-206ENST00000477085 A0A0J9YY99 117 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 KRTAP21-3Q3LHN1 58 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
COL4A6-206ENST00000477085 SPATA25Q9BR10 227 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 DNAH9Q9NYC9 4486 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 C20orf202A1L168 122 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 F5H768 121 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 PAX4O43316 350 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 HTN3P15516 51 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 MIEN1Q9BRT3 115 aa10.09□□□□□ -0.79
COL4A6-206ENST00000477085 TRAV26-1A0A087WT03 109 aa10.08□□□□□ -0.8
COL4A6-206ENST00000477085 TRAV9-2A0A087WT02 112 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 hDV102S1A0JD36 115 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 Q6ZN92 141 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 Q6ZTC4 211 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 TMEM141Q96I45 108 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 GTSF1LQ9H1H1 148 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 UBE2D4Q9Y2X8 147 aa10.07□□□□□ -0.8
COL4A6-206ENST00000477085 A0A087WX48 190 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 TEX48A0A1B0GUV7 120 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 MRPL35Q9NZE8 188 aaKnown RBP10.06□□□□□ -0.8
COL4A6-206ENST00000477085 COL7A1Q02388 2944 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 IGLV4-3A0A075B6K6 122 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 A0A096LPF7 62 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 NANOS2P60321 138 aaKnown RBP10.06□□□□□ -0.8
COL4A6-206ENST00000477085 CST9LQ9H4G1 147 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 PYGO1Q9Y3Y4 419 aa10.06□□□□□ -0.8
COL4A6-206ENST00000477085 IGLC3P0DOY3 106 aa10.05□□□□□ -0.8
COL4A6-206ENST00000477085 ATP6V0E2Q8NHE4 81 aa10.05□□□□□ -0.8
COL4A6-206ENST00000477085 TRBV6-8A0A0A6YYG3 113 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 EREGO14944 169 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 PMVKQ15126 192 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 MRPL52Q86TS9 123 aaKnown RBP10.03□□□□□ -0.8
COL4A6-206ENST00000477085 STPG4Q8N801 248 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 UQCR10Q9UDW1 63 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 MEGF8Q7Z7M0 2845 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
COL4A6-206ENST00000477085 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
COL4A6-206ENST00000477085 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
COL4A6-206ENST00000477085 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.81
COL4A6-206ENST00000477085 F8VRH5 84 aa10.02□□□□□ -0.81
COL4A6-206ENST00000477085 LBHQ53QV2 105 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms