RNA–Protein interactions for RNA: ENST00000477012.5

RNF7-203, Transcript of ring finger protein 7, humanhuman

TSL 1 (best)

Gene RNF7, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-203ENST00000477012 SRIP30626 198 aa11.04□□□□□ -0.64
RNF7-203ENST00000477012 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
RNF7-203ENST00000477012 KIAA1644Q3SXP7 199 aa11.04□□□□□ -0.64
RNF7-203ENST00000477012 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
RNF7-203ENST00000477012 TRAPPC1Q9Y5R8 145 aa11.04□□□□□ -0.64
RNF7-203ENST00000477012 D6R8Y8 96 aa11.03□□□□□ -0.64
RNF7-203ENST00000477012 GYPEP15421 78 aa11.03□□□□□ -0.64
RNF7-203ENST00000477012 NEXN-AS1Q8NBZ9 246 aa11.03□□□□□ -0.64
RNF7-203ENST00000477012 TRAV9-2A0A087WT02 112 aa11.02□□□□□ -0.65
RNF7-203ENST00000477012 NPYP01303 97 aa11.02□□□□□ -0.65
RNF7-203ENST00000477012 TRGC2P03986 189 aa11.02□□□□□ -0.65
RNF7-203ENST00000477012 KRTAP10-1P60331 282 aa11.02□□□□□ -0.65
RNF7-203ENST00000477012 TRBV10-1A0A0K0K1A3 114 aa11.01□□□□□ -0.65
RNF7-203ENST00000477012 PPBPP02775 128 aa11.01□□□□□ -0.65
RNF7-203ENST00000477012 RHOHQ15669 191 aa11.01□□□□□ -0.65
RNF7-203ENST00000477012 ORMDL3Q8N138 153 aa11.01□□□□□ -0.65
RNF7-203ENST00000477012 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
RNF7-203ENST00000477012 ALKBH7Q9BT30 221 aaPredicted RBP11.01□□□□□ -0.65
RNF7-203ENST00000477012 TRBV6-5A0A0K0K1A5 114 aa11□□□□□ -0.65
RNF7-203ENST00000477012 K7EP13 123 aa11□□□□□ -0.65
RNF7-203ENST00000477012 CKS2P33552 79 aa11□□□□□ -0.65
RNF7-203ENST00000477012 SRRM2Q9UQ35 2752 aaKnown RBP10.99□□□□□ -0.65
RNF7-203ENST00000477012 H7C1H1 209 aa10.99□□□□□ -0.65
RNF7-203ENST00000477012 TNFRSF6BO95407 300 aa10.99□□□□□ -0.65
RNF7-203ENST00000477012 Q5VSD8 79 aa10.99□□□□□ -0.65
RNF7-203ENST00000477012 PRELID3AQ96N28 172 aa10.99□□□□□ -0.65
RNF7-203ENST00000477012 NIT2Q9NQR4 276 aa10.99□□□□□ -0.65
RNF7-203ENST00000477012 INAFM2P0DMQ5 153 aa10.98□□□□□ -0.65
RNF7-203ENST00000477012 OR10J3Q5JRS4 329 aa10.98□□□□□ -0.65
RNF7-203ENST00000477012 PRADC1Q9BSG0 188 aa10.98□□□□□ -0.65
RNF7-203ENST00000477012 GAGE12JA6NER3 117 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 PRSS47A8MTI9 375 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 UBE2D3P61077 147 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 UBE2D2P62837 147 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 GAGE1Q13065 139 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 GAGE4Q13068 117 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 GAGE5Q13069 117 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 GAGE13Q4V321 117 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 DNAJC30Q96LL9 226 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 LAMTOR2Q9Y2Q5 125 aa10.97□□□□□ -0.65
RNF7-203ENST00000477012 TRBV7-3A0A075B6L6 115 aa10.96□□□□□ -0.65
RNF7-203ENST00000477012 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
RNF7-203ENST00000477012 C10orf126Q8N4M7 172 aa10.96□□□□□ -0.65
RNF7-203ENST00000477012 TMEM70Q9BUB7 260 aa10.96□□□□□ -0.65
RNF7-203ENST00000477012 FLG2Q5D862 2391 aaPredicted RBP10.96□□□□□ -0.66
RNF7-203ENST00000477012 GCSHP23434 173 aa10.95□□□□□ -0.66
RNF7-203ENST00000477012 TIRAPP58753 221 aa10.95□□□□□ -0.66
RNF7-203ENST00000477012 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
RNF7-203ENST00000477012 RPL32P62910 135 aaKnown RBP10.95□□□□□ -0.66
RNF7-203ENST00000477012 C18orf32Q8TCD1 76 aa10.95□□□□□ -0.66
RNF7-203ENST00000477012 C20orf78Q9BR46 151 aa10.95□□□□□ -0.66
RNF7-203ENST00000477012 SDHAF1A6NFY7 115 aa10.94□□□□□ -0.66
RNF7-203ENST00000477012 PPP1R17O96001 155 aa10.94□□□□□ -0.66
RNF7-203ENST00000477012 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
RNF7-203ENST00000477012 IQCJQ1A5X6 159 aa10.94□□□□□ -0.66
RNF7-203ENST00000477012 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
RNF7-203ENST00000477012 ST20Q9HBF5 79 aa10.94□□□□□ -0.66
RNF7-203ENST00000477012 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
RNF7-203ENST00000477012 TRBV27A0A0K0K1C4 114 aa10.93□□□□□ -0.66
RNF7-203ENST00000477012 SH2D6Q7Z4S9 175 aa10.93□□□□□ -0.66
RNF7-203ENST00000477012 URB1-AS1Q96HZ7 61 aa10.93□□□□□ -0.66
RNF7-203ENST00000477012 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
RNF7-203ENST00000477012 LRCOL1A6NCL2 159 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BKO60814 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 SMR3BP02814 79 aaPredicted RBP10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BJP06899 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BOP23527 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BBP33778 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BDP58876 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BCP62807 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HAMPP81172 84 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST2H2BEQ16778 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 LINC01556Q5JQF7 62 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BHQ93079 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BNQ99877 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 HIST1H2BMQ99879 126 aa10.92□□□□□ -0.66
RNF7-203ENST00000477012 TSHBP01222 138 aa10.91□□□□□ -0.66
RNF7-203ENST00000477012 LINC00310P59036 64 aa10.91□□□□□ -0.66
RNF7-203ENST00000477012 MAP1LC3AQ9H492 121 aa10.91□□□□□ -0.66
RNF7-203ENST00000477012 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
RNF7-203ENST00000477012 IBA57-AS1B1ANH7 110 aa10.9□□□□□ -0.66
RNF7-203ENST00000477012 PSCAO43653 123 aa10.9□□□□□ -0.66
RNF7-203ENST00000477012 NTM-AS1Q6ZSK4 140 aa10.9□□□□□ -0.66
RNF7-203ENST00000477012 Q8N8P6 123 aa10.9□□□□□ -0.66
RNF7-203ENST00000477012 ATP6V0E2Q8NHE4 81 aa10.9□□□□□ -0.66
RNF7-203ENST00000477012 LOC389332A0A1B0GUA5 103 aa10.89□□□□□ -0.67
RNF7-203ENST00000477012 LINC01546A6NGU7 62 aa10.89□□□□□ -0.67
RNF7-203ENST00000477012 IFI27P40305 119 aaPredicted RBP10.89□□□□□ -0.67
RNF7-203ENST00000477012 Q0VG73 95 aa10.89□□□□□ -0.67
RNF7-203ENST00000477012 DAZ4Q86SG3 579 aaKnown RBP10.89□□□□□ -0.67
RNF7-203ENST00000477012 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
RNF7-203ENST00000477012 NTN5Q8WTR8 489 aaPredicted RBP10.89□□□□□ -0.67
RNF7-203ENST00000477012 DAZ3Q9NR90 486 aaKnown RBP10.89□□□□□ -0.67
RNF7-203ENST00000477012 TRAV8-6A0A0B4J262 113 aa10.88□□□□□ -0.67
RNF7-203ENST00000477012 C1orf196B1AJZ1 125 aa10.88□□□□□ -0.67
RNF7-203ENST00000477012 I3L3M4 83 aa10.88□□□□□ -0.67
RNF7-203ENST00000477012 VCYO14598 125 aa10.88□□□□□ -0.67
RNF7-203ENST00000477012 Q8N814 137 aa10.88□□□□□ -0.67
RNF7-203ENST00000477012 Q9HAA7 133 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms