RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 NTM-AS1Q6ZSK4 140 aa10.22□□□□□ -0.77
SNX13-207ENST00000475800 CLRN3Q8NCR9 226 aa10.22□□□□□ -0.77
SNX13-207ENST00000475800 C7orf77A4D0Y5 90 aa10.21□□□□□ -0.77
SNX13-207ENST00000475800 TMEM262E9PQX1 116 aa10.21□□□□□ -0.77
SNX13-207ENST00000475800 PPBPP02775 128 aa10.21□□□□□ -0.77
SNX13-207ENST00000475800 MRPL51Q4U2R6 128 aaKnown RBP10.21□□□□□ -0.77
SNX13-207ENST00000475800 TMEM243Q9BU79 118 aa10.21□□□□□ -0.77
SNX13-207ENST00000475800 I3L3M4 83 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 SNAPINO95295 136 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 PMCHP20382 165 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 CKS2P33552 79 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 AMTP48728 403 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 SVBPQ8N300 66 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 TMEM70Q9BUB7 260 aa10.2□□□□□ -0.78
SNX13-207ENST00000475800 TRAV8-3A0A0A6YYJ7 113 aa10.19□□□□□ -0.78
SNX13-207ENST00000475800 APOC3P02656 99 aa10.19□□□□□ -0.78
SNX13-207ENST00000475800 RPS10P46783 165 aaKnown RBP10.19□□□□□ -0.78
SNX13-207ENST00000475800 KRTAP3-3Q9BYR6 98 aa10.19□□□□□ -0.78
SNX13-207ENST00000475800 KRTAP3-2Q9BYR7 98 aa10.19□□□□□ -0.78
SNX13-207ENST00000475800 RPS10P5Q9NQ39 176 aa10.19□□□□□ -0.78
SNX13-207ENST00000475800 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 SMKR1H3BMG3 65 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 PHOX2AO14813 284 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 UBE2L6O14933 153 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 APCSP02743 223 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 POLR2KP53803 58 aaKnown RBP10.18□□□□□ -0.78
SNX13-207ENST00000475800 SUMO2P61956 95 aaKnown RBP10.18□□□□□ -0.78
SNX13-207ENST00000475800 Q6ZRN7 208 aaPredicted RBP10.18□□□□□ -0.78
SNX13-207ENST00000475800 NRACQ8N912 160 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 C20orf78Q9BR46 151 aa10.18□□□□□ -0.78
SNX13-207ENST00000475800 D6R8Y8 96 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 H7C423 109 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 VCYO14598 125 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
SNX13-207ENST00000475800 Q0VG73 95 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 GAGE6Q13070 117 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 MPV17L2Q567V2 206 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 ATRAIDQ6UW56 229 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 ORMDL3Q8N138 153 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 Q8N3U1 123 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 RMI2Q96E14 147 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 TM2D2Q9BX73 214 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 KLK12Q9UKR0 248 aa10.17□□□□□ -0.78
SNX13-207ENST00000475800 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 A0A1B0GUV1 79 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 TCAPO15273 167 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 COX19Q49B96 90 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 LAMTOR2Q9Y2Q5 125 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 COX11Q9Y6N1 276 aa10.16□□□□□ -0.78
SNX13-207ENST00000475800 TNFRSF6BO95407 300 aa10.15□□□□□ -0.78
SNX13-207ENST00000475800 CRPP02741 224 aa10.15□□□□□ -0.78
SNX13-207ENST00000475800 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.78
SNX13-207ENST00000475800 RBX1P62877 108 aa10.15□□□□□ -0.78
SNX13-207ENST00000475800 TNP2Q05952 138 aa10.15□□□□□ -0.78
SNX13-207ENST00000475800 TMEM136Q6ZRR5 245 aa10.15□□□□□ -0.78
SNX13-207ENST00000475800 Q9HAA7 133 aa10.15□□□□□ -0.78
SNX13-207ENST00000475800 EREGO14944 169 aa10.14□□□□□ -0.79
SNX13-207ENST00000475800 PSCAO43653 123 aa10.14□□□□□ -0.79
SNX13-207ENST00000475800 HLA-DQA1P01909 254 aa10.14□□□□□ -0.79
SNX13-207ENST00000475800 FCER1GP30273 86 aa10.14□□□□□ -0.79
SNX13-207ENST00000475800 PRELID3AQ96N28 172 aa10.14□□□□□ -0.79
SNX13-207ENST00000475800 KRTAP4-5Q9BYR2 181 aa10.14□□□□□ -0.79
SNX13-207ENST00000475800 TSHBP01222 138 aa10.13□□□□□ -0.79
SNX13-207ENST00000475800 Q8N976 141 aa10.13□□□□□ -0.79
SNX13-207ENST00000475800 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
SNX13-207ENST00000475800 UBE2WQ96B02 151 aa10.13□□□□□ -0.79
SNX13-207ENST00000475800 NPYP01303 97 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 ESDP10768 282 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 SMAGPQ0VAQ4 97 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 MIAQ16674 131 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 AMMECR1LQ6DCA0 310 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
SNX13-207ENST00000475800 MT-ND6P03923 174 aa10.11□□□□□ -0.79
SNX13-207ENST00000475800 ZNF25P17030 456 aaPredicted RBP10.11□□□□□ -0.79
SNX13-207ENST00000475800 PRR34Q9NV39 138 aa10.11□□□□□ -0.79
SNX13-207ENST00000475800 HSPG2P98160 4391 aa10.1□□□□□ -0.79
SNX13-207ENST00000475800 C16orf90A8MZG2 172 aa10.1□□□□□ -0.79
SNX13-207ENST00000475800 SLC7A5P1Q8MH63 180 aa10.1□□□□□ -0.79
SNX13-207ENST00000475800 TMEM18Q96B42 140 aa10.1□□□□□ -0.79
SNX13-207ENST00000475800 C1orf43Q9BWL3 253 aa10.1□□□□□ -0.79
SNX13-207ENST00000475800 MAP1LC3AQ9H492 121 aa10.1□□□□□ -0.79
SNX13-207ENST00000475800 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
SNX13-207ENST00000475800 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
SNX13-207ENST00000475800 PRSS47A8MTI9 375 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 FGF6P10767 208 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 RNASEKQ6P5S7 137 aaKnown RBP10.09□□□□□ -0.79
SNX13-207ENST00000475800 ENHOQ6UWT2 76 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 LINC00269Q8N2A0 174 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 TMEM101Q96IK0 257 aa10.09□□□□□ -0.79
SNX13-207ENST00000475800 IGLV4-60A0A075B6I1 120 aa10.08□□□□□ -0.8
SNX13-207ENST00000475800 REG3AQ06141 175 aa10.08□□□□□ -0.8
SNX13-207ENST00000475800 MRPL52Q86TS9 123 aaKnown RBP10.08□□□□□ -0.8
SNX13-207ENST00000475800 A0A087WTM6 91 aa10.07□□□□□ -0.8
SNX13-207ENST00000475800 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms