RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 C10orf128Q5T292 105 aa1.44□□□□□ -2.18
TM9SF3-204ENST00000475401 Q96NJ1 140 aa1.44□□□□□ -2.18
TM9SF3-204ENST00000475401 SCRIBQ14160 1630 aa1.44□□□□□ -2.18
TM9SF3-204ENST00000475401 ADGRL2O95490 1459 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 TRBV7-3A0A075B6L6 115 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 A0A1W2PPM0 123 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 MYOZ3Q8TDC0 251 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 TSLPQ969D9 159 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 V9GYV3 84 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 LOC285556D6RIA3 1793 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 SPTBP11277 2137 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 PRDM2Q13029 1718 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 GAPVD1Q14C86 1478 aa1.43□□□□□ -2.18
TM9SF3-204ENST00000475401 ASCC3Q8N3C0 2202 aaKnown RBP1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 K7EIL1 84 aa1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 MT-ATP8P03928 68 aa1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 PLAC4Q8WY50 150 aa1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 WFDC6Q9BQY6 131 aa1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 DPY30Q9C005 99 aa1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 LENEPQ9Y5L5 61 aa1.42□□□□□ -2.18
TM9SF3-204ENST00000475401 SNCAP37840 140 aa1.41□□□□□ -2.18
TM9SF3-204ENST00000475401 MGST2Q99735 147 aa1.41□□□□□ -2.18
TM9SF3-204ENST00000475401 FYCO1Q9BQS8 1478 aa1.41□□□□□ -2.18
TM9SF3-204ENST00000475401 PRDM15P57071 1507 aaPredicted RBP1.4□□□□□ -2.18
TM9SF3-204ENST00000475401 PSME4Q14997 1843 aa1.4□□□□□ -2.18
TM9SF3-204ENST00000475401 HMCN1Q96RW7 5635 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 TANC1Q9C0D5 1861 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 MAGI1Q96QZ7 1491 aaPredicted RBP1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 GNG2P59768 71 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 GNG11P61952 73 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 Q5VV11 94 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 FAM167A-AS1Q96KT0 104 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 NDUFA4L2Q9NRX3 87 aa1.4□□□□□ -2.19
TM9SF3-204ENST00000475401 MYOM1P52179 1685 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 GOLGA3Q08378 1498 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 LINC00032P0C843 101 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 CCL18P55774 89 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 Q8N6K4 173 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 FAM213BQ8TBF2 198 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 CNTRLQ7Z7A1 2325 aa1.39□□□□□ -2.19
TM9SF3-204ENST00000475401 MRC1P22897 1456 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 RAPGEF2Q9Y4G8 1499 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 hADV29S1A0JD25 119 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 NAP1L6A6NFF2 107 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 UBE2D3P61077 147 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 RPL37P61927 97 aaKnown RBP1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 UBE2D2P62837 147 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 UBA52P62987 128 aaKnown RBP1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 Q0VG73 95 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 SPINK13Q1W4C9 94 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 LAMC3Q9Y6N6 1575 aa1.38□□□□□ -2.19
TM9SF3-204ENST00000475401 TCHHQ07283 1943 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 COL4A6Q14031 1691 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 PPP1R17O96001 155 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 AP4S1Q9Y587 144 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 NSD3Q9BZ95 1437 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 RB1CC1Q8TDY2 1594 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 SHANK2Q9UPX8 1470 aa1.37□□□□□ -2.19
TM9SF3-204ENST00000475401 LAMA4Q16363 1823 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 TRAV22A0A0B4J277 110 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 PVALEFA0A1B0GWK0 134 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 LY6G6CO95867 125 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 KRTDAPP60985 99 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 ARHGEF5Q12774 1597 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 KIAA1551Q9HCM1 1747 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 DYNLRB1Q9NP97 96 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 DOCK11Q5JSL3 2073 aa1.36□□□□□ -2.19
TM9SF3-204ENST00000475401 ZMYM4Q5VZL5 1548 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 ANKRD36BQ8N2N9 1353 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 MED13LQ71F56 2210 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 DIP2CQ9Y2E4 1556 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 TRGV1A0A0A0MS02 117 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 HMGN4O00479 90 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 GNGT2O14610 69 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 SPAG11BQ08648 103 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 SPAG11AQ6PDA7 123 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 AMELXQ99217 191 aa1.35□□□□□ -2.19
TM9SF3-204ENST00000475401 SEC11AP67812 179 aa1.34□□□□□ -2.19
TM9SF3-204ENST00000475401 C6orf52Q5T4I8 152 aa1.34□□□□□ -2.19
TM9SF3-204ENST00000475401 VAMP8Q9BV40 100 aa1.34□□□□□ -2.19
TM9SF3-204ENST00000475401 R4GMQ9 66 aa1.34□□□□□ -2.19
TM9SF3-204ENST00000475401 IFT172Q9UG01 1749 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 GVQW2A0A096LPI5 108 aaPredicted RBP1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 LOC285095A0A1B0GVY8 99 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 CHKB-CPT1BH3BT56 60 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 IGLC1P0CG04 106 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 VMO1Q7Z5L0 202 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 BAGE3Q86Y29 109 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 HMGXB3Q12766 1538 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 SSC5DA1L4H1 1573 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 PI4KAP42356 2102 aa1.33□□□□□ -2.2
TM9SF3-204ENST00000475401 MARF1Q9Y4F3 1742 aaKnown RBP1.32□□□□□ -2.2
TM9SF3-204ENST00000475401 PMCHL2Q9BQD1 86 aa1.32□□□□□ -2.2
TM9SF3-204ENST00000475401 PRO1854Q9UHT4 67 aa1.32□□□□□ -2.2
TM9SF3-204ENST00000475401 V9GYS6 101 aa1.32□□□□□ -2.2
TM9SF3-204ENST00000475401 CDK13Q14004 1512 aaKnown RBP1.31□□□□□ -2.2
TM9SF3-204ENST00000475401 ROS1P08922 2347 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms