RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
PCGF3-209ENST00000475288 LRP2P98164 4655 aa11.34□□□□□ -0.59
PCGF3-209ENST00000475288 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
PCGF3-209ENST00000475288 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.6
PCGF3-209ENST00000475288 SRSF3P84103 164 aaKnown RBP11.33□□□□□ -0.6
PCGF3-209ENST00000475288 AP5S1Q9NUS5 200 aa11.33□□□□□ -0.6
PCGF3-209ENST00000475288 BAGE2Q86Y30 109 aa11.32□□□□□ -0.6
PCGF3-209ENST00000475288 SLC7A5P1Q8MH63 180 aa11.32□□□□□ -0.6
PCGF3-209ENST00000475288 C20orf203Q8NBC4 194 aa11.32□□□□□ -0.6
PCGF3-209ENST00000475288 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
PCGF3-209ENST00000475288 A0A087WYN8 130 aa11.31□□□□□ -0.6
PCGF3-209ENST00000475288 C9JQL5 133 aa11.31□□□□□ -0.6
PCGF3-209ENST00000475288 H7C1H1 209 aa11.31□□□□□ -0.6
PCGF3-209ENST00000475288 M0QY20 66 aa11.31□□□□□ -0.6
PCGF3-209ENST00000475288 PLAC8Q9NZF1 115 aa11.31□□□□□ -0.6
PCGF3-209ENST00000475288 IGLV10-54A0A075B6I4 117 aa11.3□□□□□ -0.6
PCGF3-209ENST00000475288 MUC21A0A0G2JKD1 596 aa11.3□□□□□ -0.6
PCGF3-209ENST00000475288 MUC21A0A140T8X8 626 aa11.3□□□□□ -0.6
PCGF3-209ENST00000475288 SCO2A0A1W2PP80 73 aa11.3□□□□□ -0.6
PCGF3-209ENST00000475288 TMEM218A2RU14 115 aa11.3□□□□□ -0.6
PCGF3-209ENST00000475288 SLPIP03973 132 aa11.3□□□□□ -0.6
PCGF3-209ENST00000475288 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
PCGF3-209ENST00000475288 PGLYRP4Q96LB8 373 aa11.29□□□□□ -0.6
PCGF3-209ENST00000475288 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
PCGF3-209ENST00000475288 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
PCGF3-209ENST00000475288 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
PCGF3-209ENST00000475288 IGLC6P0CF74 106 aa11.27□□□□□ -0.61
PCGF3-209ENST00000475288 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
PCGF3-209ENST00000475288 DPH3Q96FX2 82 aa11.27□□□□□ -0.61
PCGF3-209ENST00000475288 CARHSP1Q9Y2V2 147 aaKnown RBP11.27□□□□□ -0.61
PCGF3-209ENST00000475288 IGLV4-60A0A075B6I1 120 aa11.26□□□□□ -0.61
PCGF3-209ENST00000475288 SUMO4Q6EEV6 95 aa11.26□□□□□ -0.61
PCGF3-209ENST00000475288 WDR73Q6P4I2 378 aa11.26□□□□□ -0.61
PCGF3-209ENST00000475288 C7orf33Q8WU49 177 aa11.26□□□□□ -0.61
PCGF3-209ENST00000475288 SMIM12Q96EX1 92 aa11.26□□□□□ -0.61
PCGF3-209ENST00000475288 CACNG7P62955 275 aa11.25□□□□□ -0.61
PCGF3-209ENST00000475288 LINC01600Q96MT4 127 aa11.25□□□□□ -0.61
PCGF3-209ENST00000475288 SMIM7Q9BQ49 75 aa11.25□□□□□ -0.61
PCGF3-209ENST00000475288 GFRA4Q9GZZ7 299 aa11.25□□□□□ -0.61
PCGF3-209ENST00000475288 PHOX2AO14813 284 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 ATP6V1G1O75348 118 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 MGPP08493 103 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 ADCYAP1P18509 176 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 RPL35P42766 123 aaKnown RBP11.24□□□□□ -0.61
PCGF3-209ENST00000475288 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
PCGF3-209ENST00000475288 SSTP61278 116 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 CFAP161Q6P656 301 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 FER1L6-AS1Q8NA97 138 aa11.24□□□□□ -0.61
PCGF3-209ENST00000475288 C15orf56Q8N910 161 aa11.23□□□□□ -0.61
PCGF3-209ENST00000475288 DPH3P1Q9H4G8 78 aa11.23□□□□□ -0.61
PCGF3-209ENST00000475288 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
PCGF3-209ENST00000475288 TRBV20OR9-2A0A075B6H5 130 aa11.22□□□□□ -0.61
PCGF3-209ENST00000475288 ZNF727A8MUV8 499 aa11.22□□□□□ -0.61
PCGF3-209ENST00000475288 F2Z2F3 143 aa11.22□□□□□ -0.61
PCGF3-209ENST00000475288 F8W036 122 aa11.22□□□□□ -0.61
PCGF3-209ENST00000475288 S100A1P23297 94 aa11.22□□□□□ -0.61
PCGF3-209ENST00000475288 PNRC1Q12796 327 aaPredicted RBP11.22□□□□□ -0.61
PCGF3-209ENST00000475288 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
PCGF3-209ENST00000475288 RNF213Q63HN8 5207 aa11.21□□□□□ -0.61
PCGF3-209ENST00000475288 UBE2L6O14933 153 aa11.21□□□□□ -0.61
PCGF3-209ENST00000475288 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
PCGF3-209ENST00000475288 RPS10P46783 165 aaKnown RBP11.21□□□□□ -0.61
PCGF3-209ENST00000475288 C19orf71A6NCJ1 209 aa11.2□□□□□ -0.62
PCGF3-209ENST00000475288 GNG4P50150 75 aa11.2□□□□□ -0.62
PCGF3-209ENST00000475288 CEBPGP53567 150 aa11.2□□□□□ -0.62
PCGF3-209ENST00000475288 PRR3P79522 188 aaKnown RBP11.2□□□□□ -0.62
PCGF3-209ENST00000475288 COX6A2Q02221 97 aa11.2□□□□□ -0.62
PCGF3-209ENST00000475288 TMEM241Q24JQ0 296 aa11.2□□□□□ -0.62
PCGF3-209ENST00000475288 XKRY2A2RUG3 117 aa11.19□□□□□ -0.62
PCGF3-209ENST00000475288 COTL1Q14019 142 aa11.19□□□□□ -0.62
PCGF3-209ENST00000475288 CENPWQ5EE01 88 aa11.19□□□□□ -0.62
PCGF3-209ENST00000475288 OR2D3Q8NGH3 330 aa11.19□□□□□ -0.62
PCGF3-209ENST00000475288 TPPP3Q9BW30 176 aa11.19□□□□□ -0.62
PCGF3-209ENST00000475288 GAGE12HA6NDE8 117 aa11.18□□□□□ -0.62
PCGF3-209ENST00000475288 AMTP48728 403 aa11.18□□□□□ -0.62
PCGF3-209ENST00000475288 LINC01551Q86U37 167 aa11.18□□□□□ -0.62
PCGF3-209ENST00000475288 SVBPQ8N300 66 aa11.18□□□□□ -0.62
PCGF3-209ENST00000475288 GVQW2A0A096LPI5 108 aaPredicted RBP11.17□□□□□ -0.62
PCGF3-209ENST00000475288 MAJINQ3KP22 176 aa11.17□□□□□ -0.62
PCGF3-209ENST00000475288 PRSS3P2Q8NHM4 247 aa11.17□□□□□ -0.62
PCGF3-209ENST00000475288 BIN3Q9NQY0 253 aa11.17□□□□□ -0.62
PCGF3-209ENST00000475288 A0A0J9YXV3 536 aa11.16□□□□□ -0.62
PCGF3-209ENST00000475288 GTSF1Q8WW33 167 aa11.16□□□□□ -0.62
PCGF3-209ENST00000475288 CNFNQ9BYD5 112 aa11.16□□□□□ -0.62
PCGF3-209ENST00000475288 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
PCGF3-209ENST00000475288 PKIGQ9Y2B9 76 aa11.16□□□□□ -0.62
PCGF3-209ENST00000475288 H7C423 109 aa11.15□□□□□ -0.62
PCGF3-209ENST00000475288 SNAPINO95295 136 aa11.15□□□□□ -0.62
PCGF3-209ENST00000475288 APOC3P02656 99 aa11.15□□□□□ -0.62
PCGF3-209ENST00000475288 CTRLP40313 264 aa11.15□□□□□ -0.62
PCGF3-209ENST00000475288 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
PCGF3-209ENST00000475288 STPG4Q8N801 248 aa11.15□□□□□ -0.62
PCGF3-209ENST00000475288 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
PCGF3-209ENST00000475288 IGKV2-24A0A0C4DH68 120 aa11.14□□□□□ -0.63
PCGF3-209ENST00000475288 NCR2O95944 276 aa11.14□□□□□ -0.63
PCGF3-209ENST00000475288 NTF3P20783 257 aa11.14□□□□□ -0.63
PCGF3-209ENST00000475288 KRTAP10-8P60410 259 aa11.14□□□□□ -0.63
PCGF3-209ENST00000475288 RHEBQ15382 184 aa11.14□□□□□ -0.63
PCGF3-209ENST00000475288 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms