RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 ATP6V0E2Q8NHE4 81 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 PRELID3AQ96N28 172 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 GTSF1LQ9H1H1 148 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 ST20Q9HBF5 79 aa8.9□□□□□ -0.98
TPM3-216ENST00000473036 TRBV7-3A0A075B6L6 115 aa8.89□□□□□ -0.99
TPM3-216ENST00000473036 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
TPM3-216ENST00000473036 D6R8Y8 96 aa8.89□□□□□ -0.99
TPM3-216ENST00000473036 K7EMI3 77 aa8.89□□□□□ -0.99
TPM3-216ENST00000473036 UBE2D3P61077 147 aa8.89□□□□□ -0.99
TPM3-216ENST00000473036 UBE2D2P62837 147 aa8.89□□□□□ -0.99
TPM3-216ENST00000473036 RPL32P62910 135 aaKnown RBP8.89□□□□□ -0.99
TPM3-216ENST00000473036 DAZ4Q86SG3 579 aaKnown RBP8.89□□□□□ -0.99
TPM3-216ENST00000473036 DAZ3Q9NR90 486 aaKnown RBP8.89□□□□□ -0.99
TPM3-216ENST00000473036 C1orf196B1AJZ1 125 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 VCYO14598 125 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 CDK2AP2O75956 126 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 TNFRSF6BO95407 300 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 TRGC2P03986 189 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 G0S2P27469 103 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 RAB5BP61020 215 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 ALKBH7Q9BT30 221 aaPredicted RBP8.88□□□□□ -0.99
TPM3-216ENST00000473036 MAP1LC3AQ9H492 121 aa8.88□□□□□ -0.99
TPM3-216ENST00000473036 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
TPM3-216ENST00000473036 PMCHP20382 165 aa8.87□□□□□ -0.99
TPM3-216ENST00000473036 SUMO2P61956 95 aaKnown RBP8.87□□□□□ -0.99
TPM3-216ENST00000473036 LELP1Q5T871 98 aa8.87□□□□□ -0.99
TPM3-216ENST00000473036 C1orf134Q5TEV5 83 aa8.87□□□□□ -0.99
TPM3-216ENST00000473036 C6orf223Q8N319 242 aa8.87□□□□□ -0.99
TPM3-216ENST00000473036 KIR2DL4Q99706 377 aa8.87□□□□□ -0.99
TPM3-216ENST00000473036 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
TPM3-216ENST00000473036 IGHV3-38A0A0C4DH36 116 aa8.86□□□□□ -0.99
TPM3-216ENST00000473036 Q6ZRN7 208 aaPredicted RBP8.86□□□□□ -0.99
TPM3-216ENST00000473036 TRAV26-2A0A0B4J265 109 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 TRBV27A0A0K0K1C4 114 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 LINC01549A6NIU2 74 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 I3L3M4 83 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 GAS8-AS1O95177 125 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 NCR2O95944 276 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 TNP2Q05952 138 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 KIAA1644Q3SXP7 199 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 NRACQ8N912 160 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 PRSS3P2Q8NHM4 247 aa8.85□□□□□ -0.99
TPM3-216ENST00000473036 SDHAF1A6NFY7 115 aa8.84□□□□□ -0.99
TPM3-216ENST00000473036 SMAGPQ0VAQ4 97 aa8.84□□□□□ -0.99
TPM3-216ENST00000473036 Q0VG73 95 aa8.84□□□□□ -0.99
TPM3-216ENST00000473036 LINC01556Q5JQF7 62 aa8.84□□□□□ -0.99
TPM3-216ENST00000473036 NTM-AS1Q6ZSK4 140 aa8.84□□□□□ -0.99
TPM3-216ENST00000473036 KRTAP4-5Q9BYR2 181 aa8.84□□□□□ -0.99
TPM3-216ENST00000473036 NPYP01303 97 aa8.83□□□□□ -1
TPM3-216ENST00000473036 POLR2KP53803 58 aaKnown RBP8.83□□□□□ -1
TPM3-216ENST00000473036 PKIAP61925 76 aa8.83□□□□□ -1
TPM3-216ENST00000473036 COTL1Q14019 142 aa8.83□□□□□ -1
TPM3-216ENST00000473036 TTC32Q5I0X7 151 aa8.83□□□□□ -1
TPM3-216ENST00000473036 Q8N8P6 123 aa8.83□□□□□ -1
TPM3-216ENST00000473036 TMEM70Q9BUB7 260 aa8.83□□□□□ -1
TPM3-216ENST00000473036 SMKR1H3BMG3 65 aa8.82□□□□□ -1
TPM3-216ENST00000473036 IGHV3-30P01768 117 aa8.82□□□□□ -1
TPM3-216ENST00000473036 IGHV3-33P01772 117 aa8.82□□□□□ -1
TPM3-216ENST00000473036 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
TPM3-216ENST00000473036 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
TPM3-216ENST00000473036 FCER1GP30273 86 aa8.82□□□□□ -1
TPM3-216ENST00000473036 ORMDL2Q53FV1 153 aa8.82□□□□□ -1
TPM3-216ENST00000473036 BAGE3Q86Y29 109 aa8.82□□□□□ -1
TPM3-216ENST00000473036 DEFB104AQ8WTQ1 72 aa8.82□□□□□ -1
TPM3-216ENST00000473036 TMEM18Q96B42 140 aa8.82□□□□□ -1
TPM3-216ENST00000473036 RPL39LQ96EH5 51 aaKnown RBP8.82□□□□□ -1
TPM3-216ENST00000473036 SMIM2Q9BVW6 85 aa8.82□□□□□ -1
TPM3-216ENST00000473036 TRAV8-6A0A0B4J262 113 aa8.81□□□□□ -1
TPM3-216ENST00000473036 LINC00614P0C842 121 aa8.81□□□□□ -1
TPM3-216ENST00000473036 FA2HQ7L5A8 372 aa8.81□□□□□ -1
TPM3-216ENST00000473036 C18orf32Q8TCD1 76 aa8.81□□□□□ -1
TPM3-216ENST00000473036 CHCHD1Q96BP2 118 aaKnown RBP8.81□□□□□ -1
TPM3-216ENST00000473036 FAT1Q14517 4588 aa8.81□□□□□ -1
TPM3-216ENST00000473036 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
TPM3-216ENST00000473036 NIT1Q86X76 327 aa8.8□□□□□ -1
TPM3-216ENST00000473036 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
TPM3-216ENST00000473036 LOC389332A0A1B0GUA5 103 aa8.79□□□□□ -1
TPM3-216ENST00000473036 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
TPM3-216ENST00000473036 H7C423 109 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BKO60814 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BJP06899 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BOP23527 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BBP33778 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BDP58876 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BCP62807 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 LAGE3Q14657 143 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
TPM3-216ENST00000473036 AP5S1Q9NUS5 200 aa8.79□□□□□ -1
TPM3-216ENST00000473036 IGHV1-24A0A0C4DH33 117 aa8.78□□□□□ -1
TPM3-216ENST00000473036 LINC01546A6NGU7 62 aa8.78□□□□□ -1
TPM3-216ENST00000473036 C16orf90A8MZG2 172 aa8.78□□□□□ -1
TPM3-216ENST00000473036 S100A6P06703 90 aa8.78□□□□□ -1
TPM3-216ENST00000473036 BTF3P20290 206 aaKnown RBP8.78□□□□□ -1
TPM3-216ENST00000473036 Q8N1X5 172 aa8.78□□□□□ -1
TPM3-216ENST00000473036 MAPKAPK5-AS1Q8N8E1 139 aa8.78□□□□□ -1
TPM3-216ENST00000473036 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms