RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 POM121L12Q8N7R1 296 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 OPRPNQ99935 248 aaPredicted RBP9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 IGHV4OR15-8A0A075B7B6 117 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 A0A087WW49 117 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 SDHAF1A6NFY7 115 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 F5H697 171 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 CCDC179H3BU77 68 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 M0QXV9 152 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 OVOL1O14753 267 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 RNF152Q8N8N0 203 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 MUC4Q99102 2169 aa9.79□□□□□ -0.84
SCAMP4-207ENST00000472442 TEX49A0A1B0GTD5 131 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 VCYO14598 125 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 RPL32P62910 135 aaKnown RBP9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 KRTAP1-1Q07627 177 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 LINC01620Q4KN68 170 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 DCANP1Q8TF63 244 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 UBE2E2Q96LR5 201 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 A0A0B4J2C4 111 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 P0DMU3 169 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 FAM231AP0DMU4 169 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 FAM231CP0DMU5 169 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 TTC32Q5I0X7 151 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 C18orf65Q6ZTR6 163 aa9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 ZNF256Q9Y2P7 627 aaPredicted RBP9.78□□□□□ -0.84
SCAMP4-207ENST00000472442 NXPH4O95158 308 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 ATXN8Q156A1 80 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 GAGE12JA6NER3 117 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 GAGE7O76087 117 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 GAGE12FP0CL80 117 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 GAGE12GP0CL81 117 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 GAGE12IP0CL82 117 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 SYNJ2BPP57105 145 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 GAGE4Q13068 117 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 FAM19A4Q96LR4 140 aa9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 ANK3Q12955 4377 aaKnown RBP9.77□□□□□ -0.85
SCAMP4-207ENST00000472442 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 LEPROTO15243 131 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 IFITM1P13164 125 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 UNC79Q9P2D8 2635 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 TRAV8-4A0A0B4J246 113 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 FAM74A4Q5TZK3 123 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 ODF3Q96PU9 254 aa9.76□□□□□ -0.85
SCAMP4-207ENST00000472442 HOXD3P31249 432 aaPredicted RBP9.75□□□□□ -0.85
SCAMP4-207ENST00000472442 MYO9AB2RTY4 2548 aa9.75□□□□□ -0.85
SCAMP4-207ENST00000472442 APRG1Q8IVJ8 170 aa9.75□□□□□ -0.85
SCAMP4-207ENST00000472442 C15orf53Q8NAA6 179 aa9.75□□□□□ -0.85
SCAMP4-207ENST00000472442 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 LGALS9O00182 355 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 TRIAP1O43715 76 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 DEFB136Q30KP8 78 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 HIST2H2BDQ6DRA6 164 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 NF1P21359 2839 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 ACANP16112 2415 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 FAM159AQ6UWV7 190 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 ESM1Q9NQ30 184 aa9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 GCN1Q92616 2671 aaKnown RBP9.74□□□□□ -0.85
SCAMP4-207ENST00000472442 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 H3BMM0 161 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 TMEM86BQ8N661 226 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 UBE2WQ96B02 151 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 DNAJC9-AS1A6NH13 148 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 ADARB2-AS1A8MUL3 147 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 Q6ZSV7 163 aa9.73□□□□□ -0.85
SCAMP4-207ENST00000472442 A0A0J9YXV3 536 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 Q6Q795 121 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 M0R2P5 195 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 A0A0J9YXY3 114 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 SLURP1P55000 103 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 ZNF56Q15929 161 aa9.72□□□□□ -0.85
SCAMP4-207ENST00000472442 TRAV12-3A0A0B4J271 114 aa9.71□□□□□ -0.86
SCAMP4-207ENST00000472442 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.86
SCAMP4-207ENST00000472442 TRBV30A0A0K0K1B3 111 aa9.71□□□□□ -0.86
SCAMP4-207ENST00000472442 ID1P41134 155 aa9.71□□□□□ -0.86
SCAMP4-207ENST00000472442 C2orf82Q6UX34 121 aa9.71□□□□□ -0.86
SCAMP4-207ENST00000472442 SMIM20Q8N5G0 67 aa9.71□□□□□ -0.86
SCAMP4-207ENST00000472442 K7EQG2 157 aa9.7□□□□□ -0.86
SCAMP4-207ENST00000472442 NSUN5P1Q3KNT7 163 aa9.7□□□□□ -0.86
SCAMP4-207ENST00000472442 DUX3Q96PT4 197 aa9.7□□□□□ -0.86
SCAMP4-207ENST00000472442 KLLNB2CW77 178 aa9.7□□□□□ -0.86
SCAMP4-207ENST00000472442 PRSS2P07478 247 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 YAE1D1Q9NRH1 226 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 LINC01600Q96MT4 127 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 A0A0J9YX75 114 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 H7C423 109 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 M0QY20 66 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 RHOHQ15669 191 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 SPXQ9BT56 116 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
SCAMP4-207ENST00000472442 FASNP49327 2511 aaKnown RBP9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 IGHV3-30-3P0DP02 117 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 HERV-K104P63124 156 aa9.68□□□□□ -0.86
SCAMP4-207ENST00000472442 SHISA2Q6UWI4 295 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms