RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 NAT8BQ9UHF3 227 aa6.06□□□□□ -1.44
SYN3-211ENST00000472027 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 SMIM27A0A1W2PRY6 76 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 GAS8-AS1O95177 125 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 CRPP02741 224 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 GCSHP23434 173 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 AMN1Q8IY45 258 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 NTN5Q8WTR8 489 aaPredicted RBP6.05□□□□□ -1.44
SYN3-211ENST00000472027 C1orf43Q9BWL3 253 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 PRR34Q9NV39 138 aa6.05□□□□□ -1.44
SYN3-211ENST00000472027 IGLV4-60A0A075B6I1 120 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 TRBV6-5A0A0K0K1A5 114 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 A0A1B0GUV1 79 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 SDHAF1A6NFY7 115 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 PMCHP20382 165 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 AMTP48728 403 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 MIAQ16674 131 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 CLLU1Q5K131 121 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 LINC00269Q8N2A0 174 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 C20orf203Q8NBC4 194 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
SYN3-211ENST00000472027 APOBP04114 4563 aaKnown RBP6.04□□□□□ -1.44
SYN3-211ENST00000472027 HSPG2P98160 4391 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 I3L3M4 83 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 UBE2L6O14933 153 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 NCR2O95944 276 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 IFITM2Q01629 132 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 REG3AQ06141 175 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 CLPSL2Q6UWE3 100 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 MRAP2Q96G30 205 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 ST20Q9HBF5 79 aa6.03□□□□□ -1.44
SYN3-211ENST00000472027 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.02□□□□□ -1.45
SYN3-211ENST00000472027 APCSP02743 223 aa6.02□□□□□ -1.45
SYN3-211ENST00000472027 RPS10P46783 165 aaKnown RBP6.02□□□□□ -1.45
SYN3-211ENST00000472027 CAMPP49913 170 aa6.02□□□□□ -1.45
SYN3-211ENST00000472027 XGP55808 180 aa6.02□□□□□ -1.45
SYN3-211ENST00000472027 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.01□□□□□ -1.45
SYN3-211ENST00000472027 A0A1B0GW15 77 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 IGKV2-29A2NJV5 120 aaPredicted RBP6.01□□□□□ -1.45
SYN3-211ENST00000472027 SMKR1H3BMG3 65 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 H7C423 109 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 POLR2KP53803 58 aaKnown RBP6.01□□□□□ -1.45
SYN3-211ENST00000472027 PNRC1Q12796 327 aaPredicted RBP6.01□□□□□ -1.45
SYN3-211ENST00000472027 MRPL51Q4U2R6 128 aaKnown RBP6.01□□□□□ -1.45
SYN3-211ENST00000472027 FAM104BQ5XKR9 115 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 MRPL54Q6P161 138 aaKnown RBP6.01□□□□□ -1.45
SYN3-211ENST00000472027 KRTAP26-1Q6PEX3 210 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 TMEM70Q9BUB7 260 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 KRTAP4-5Q9BYR2 181 aa6.01□□□□□ -1.45
SYN3-211ENST00000472027 IGLV10-54A0A075B6I4 117 aa6□□□□□ -1.45
SYN3-211ENST00000472027 TRAV8-4A0A0B4J246 113 aa6□□□□□ -1.45
SYN3-211ENST00000472027 TRBV27A0A0K0K1C4 114 aa6□□□□□ -1.45
SYN3-211ENST00000472027 VCYO14598 125 aa6□□□□□ -1.45
SYN3-211ENST00000472027 PPP1R2P9O14990 202 aa6□□□□□ -1.45
SYN3-211ENST00000472027 PPP1R17O96001 155 aa6□□□□□ -1.45
SYN3-211ENST00000472027 TSHBP01222 138 aa6□□□□□ -1.45
SYN3-211ENST00000472027 HLA-DQA1P01909 254 aa6□□□□□ -1.45
SYN3-211ENST00000472027 ESDP10768 282 aa6□□□□□ -1.45
SYN3-211ENST00000472027 AMMECR1LQ6DCA0 310 aa6□□□□□ -1.45
SYN3-211ENST00000472027 Q8N1X5 172 aa6□□□□□ -1.45
SYN3-211ENST00000472027 NRACQ8N912 160 aa6□□□□□ -1.45
SYN3-211ENST00000472027 A0A1B0GXF2 115 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 LINC00862A6NCI5 91 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 USP17L23D6RBM5 183 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 S100A8P05109 93 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 FGF6P10767 208 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 HBBP68871 147 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 C14orf177Q52M58 125 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 RNASEKQ6P5S7 137 aaKnown RBP5.99□□□□□ -1.45
SYN3-211ENST00000472027 ANAPC16Q96DE5 110 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 TMEM242Q9NWH2 141 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 FAM30AQ9NZY2 134 aa5.99□□□□□ -1.45
SYN3-211ENST00000472027 PCLOQ9Y6V0 5065 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 IGKV3OR2-268A0A0C4DH90 116 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 F8W036 122 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 MT-ND4LP03901 98 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 CKS2P33552 79 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 SUMO2P61956 95 aaKnown RBP5.98□□□□□ -1.45
SYN3-211ENST00000472027 LINC01620Q4KN68 170 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 UQCC3Q6UW78 93 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 DNAH8Q96JB1 4490 aa5.98□□□□□ -1.45
SYN3-211ENST00000472027 TRBV24-1A0A075B6N3 115 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 TMEM218A2RU14 115 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 PRSS1P07477 247 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 ZNF25P17030 456 aaPredicted RBP5.97□□□□□ -1.45
SYN3-211ENST00000472027 HAMPP81172 84 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 ATP5L2Q7Z4Y8 100 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 BTF3L4Q96K17 158 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
SYN3-211ENST00000472027 C7orf77A4D0Y5 90 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 D6R8Y8 96 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 TNFRSF6BO95407 300 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 SMR3BP02814 79 aaPredicted RBP5.96□□□□□ -1.46
SYN3-211ENST00000472027 ADCYAP1P18509 176 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 FCER1GP30273 86 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 DGAT2L7PQ6IED9 249 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 CLRN3Q8NCR9 226 aa5.96□□□□□ -1.46
SYN3-211ENST00000472027 OR5A1Q8NGJ0 315 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms