RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 K7EN84 100 aa10.22□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 COX7BP24311 80 aa10.22□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 KIAA1549LQ6ZVL6 1849 aa10.21□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 INAFM1C9JVW0 142 aa10.21□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 LGALS9O00182 355 aa10.21□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 PLA2G2CQ5R387 149 aa10.21□□□□□ -0.77
NPHP3-ACAD11-201ENST00000471702 C5orf56Q8N8D9 126 aa10.21□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 Q8N9L7 120 aa10.21□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CLEC2BQ92478 149 aa10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 FOXL2NBQ6ZUU3 175 aa10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 LINC00269Q8N2A0 174 aa10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 MDFICQ9P1T7 246 aa10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 LYL1P12980 280 aa10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CIRBP-AS1Q8TBR5 109 aa10.2□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 KAAG1Q9UBP8 84 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 NAV2Q8IVL1 2488 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 Q6Q795 121 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 ZNF524Q96C55 264 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 P0DMU3 169 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 FAM231AP0DMU4 169 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 FAM231CP0DMU5 169 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 C11orf52Q96A22 123 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 RETNLBQ9BQ08 111 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 C20orf144Q9BQM9 153 aa10.19□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 FAM240AA0A1B0GVK7 77 aa10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 FAM19A5Q7Z5A7 132 aaPredicted RBP10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 SLX1AQ9BQ83 275 aa10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 J3KT08 172 aa10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 DNAJC9-AS1A6NH13 148 aa10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CEMP1Q6PRD7 247 aaPredicted RBP10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 ALPK3Q96L96 1907 aa10.18□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 TCL1BO95988 128 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 DEFB131BA0A096LNP1 70 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CRYGBP07316 175 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 ADORA2A-AS1P86434 159 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 PPDPFQ9H3Y8 114 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 RNF152Q8N8N0 203 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 PRAC2D3DTV9 90 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 C10orf105Q8TEF2 133 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CENPFP49454 3210 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 PIP4P1Q86T03 277 aa10.17□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 LINC00337Q8N6G1 96 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 IGF2RP11717 2491 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 SPATA12Q7Z6I5 190 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 MED14OSP0DP75 135 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 IL15RAQ13261 267 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 SCXQ7RTU7 201 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 V9GYY9 64 aa10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 ZNF706Q9Y5V0 76 aaPredicted RBP10.16□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 C4orf3Q8WVX3 66 aa10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 ZNF747Q9BV97 191 aa10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 NUPR2A6NF83 97 aa10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 K7EIM0 57 aa10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CXCL5P42830 114 aa10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 RSPO1Q2MKA7 263 aaPredicted RBP10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 PRO0255Q9UI72 69 aa10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 CSDC2Q9Y534 153 aaKnown RBP10.15□□□□□ -0.78
NPHP3-ACAD11-201ENST00000471702 NFE4Q86UQ8 179 aa10.15□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 THSD7BQ9C0I4 1608 aa10.15□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 ADAMTS20P59510 1910 aa10.14□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 LINC00173Q6ZV60 143 aa10.14□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 TMEM263Q8WUH6 116 aaKnown RBP10.14□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 SLPIP03973 132 aa10.14□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 UNQ9165/PRO28630Q6UXU0 137 aa10.14□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 C1orf158Q8N1D5 194 aa10.13□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 FAM222AQ5U5X8 452 aa10.13□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 LENEPQ9Y5L5 61 aa10.13□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 MYCNOSP40205 109 aa10.13□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 TTTY13Q9BZ97 58 aa10.13□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 LINC00482Q8N8I6 264 aa10.13□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 A6NDX4 124 aa10.12□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 IGLV11-55A0A075B6I3 123 aa10.12□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 TEN1Q86WV5 123 aa10.12□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 XAGE1AQ9HD64 81 aa10.12□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 I3L2K1 104 aa10.11□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 SPINK1P00995 79 aa10.11□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 IGF1P05019 195 aa10.11□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 SPTBN4Q9H254 2564 aa10.11□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 PDE6GP18545 87 aa10.11□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 C3orf84H3BNL1 204 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 Q6ZUT4 128 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 C11orf53Q8IXP5 236 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 NDUFC2-KCTD14E9PQ53 114 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 REG3AQ06141 175 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 DCANP1Q8TF63 244 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 PKD1L2Q7Z442 2459 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 TMEM89A2RUT3 159 aa10.1□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 WFDC2Q14508 124 aa10.09□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 IGKV2-28A0A075B6P5 120 aa10.09□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 IGKV2D-28P01615 120 aa10.09□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 Q6ZTI0 123 aa10.09□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 SIVA1O15304 175 aa10.09□□□□□ -0.79
NPHP3-ACAD11-201ENST00000471702 TDRG1Q3Y452 100 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms