RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 UQCR10Q9UDW1 63 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 TP53TG1Q9Y2A0 90 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 X6R8D5 127 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 GAGE12BA1L429 117 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 GAGE7O76087 117 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 GAGE12FP0CL80 117 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 GAGE12GP0CL81 117 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 GAGE12IP0CL82 117 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 MAJINQ3KP22 176 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 TIMM17AQ99595 171 aa12.44□□□□□ -0.42
HSPG2-208ENST00000471322 A0A087WX48 190 aa12.43□□□□□ -0.42
HSPG2-208ENST00000471322 IGLC3P0DOY3 106 aa12.43□□□□□ -0.42
HSPG2-208ENST00000471322 hDV102S1A0JD36 115 aa12.42□□□□□ -0.42
HSPG2-208ENST00000471322 IGIPA6NJ69 53 aa12.42□□□□□ -0.42
HSPG2-208ENST00000471322 K7EQD1 137 aa12.42□□□□□ -0.42
HSPG2-208ENST00000471322 DPM2O94777 84 aa12.42□□□□□ -0.42
HSPG2-208ENST00000471322 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
HSPG2-208ENST00000471322 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
HSPG2-208ENST00000471322 RPL36AP83881 106 aaKnown RBP12.41□□□□□ -0.42
HSPG2-208ENST00000471322 C20orf203Q8NBC4 194 aa12.41□□□□□ -0.42
HSPG2-208ENST00000471322 RPL36ALQ969Q0 106 aaKnown RBP12.41□□□□□ -0.42
HSPG2-208ENST00000471322 IGKCP01834 107 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 PLNP26678 52 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 EMP1P54849 157 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 LINC00612Q8N6U2 182 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 DNAH7Q8WXX0 4024 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 TRBV6-4A0A1B0GX49 114 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 LYRM9A8MSI8 78 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 OR11H2Q8NH07 326 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 BAALCQ8WXS3 180 aa12.4□□□□□ -0.42
HSPG2-208ENST00000471322 RPL39P62891 51 aaKnown RBP12.39□□□□□ -0.43
HSPG2-208ENST00000471322 COTL1Q14019 142 aa12.39□□□□□ -0.43
HSPG2-208ENST00000471322 DAZ4Q86SG3 579 aaKnown RBP12.39□□□□□ -0.43
HSPG2-208ENST00000471322 SLC25A29Q8N8R3 303 aa12.39□□□□□ -0.43
HSPG2-208ENST00000471322 ZNRF2Q8NHG8 242 aa12.39□□□□□ -0.43
HSPG2-208ENST00000471322 DAZ3Q9NR90 486 aaKnown RBP12.39□□□□□ -0.43
HSPG2-208ENST00000471322 TRGV4A0A0C4DH28 118 aa12.38□□□□□ -0.43
HSPG2-208ENST00000471322 F8VRH5 84 aa12.38□□□□□ -0.43
HSPG2-208ENST00000471322 MIFP14174 115 aa12.38□□□□□ -0.43
HSPG2-208ENST00000471322 RNF183Q96D59 192 aa12.38□□□□□ -0.43
HSPG2-208ENST00000471322 MRPL35Q9NZE8 188 aaKnown RBP12.38□□□□□ -0.43
HSPG2-208ENST00000471322 Q9UF83 564 aa12.38□□□□□ -0.43
HSPG2-208ENST00000471322 CHTOPQ9Y3Y2 248 aaKnown RBP12.38□□□□□ -0.43
HSPG2-208ENST00000471322 NPSP0C0P6 89 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 PMVKQ15126 192 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 PAPPA-AS1Q5QFB9 102 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 DEFB104AQ8WTQ1 72 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 C14orf144Q96I85 54 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 WWC2-AS2Q96NR7 200 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 PYGO1Q9Y3Y4 419 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 NACAE9PAV3 2078 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 PRSS29PA6NIE9 313 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 PRADC1Q9BSG0 188 aa12.37□□□□□ -0.43
HSPG2-208ENST00000471322 DEFB130BP0DP73 79 aa12.36□□□□□ -0.43
HSPG2-208ENST00000471322 DEFB130AP0DP74 79 aa12.36□□□□□ -0.43
HSPG2-208ENST00000471322 FHL2Q14192 279 aa12.36□□□□□ -0.43
HSPG2-208ENST00000471322 HHLA3Q9XRX5 114 aa12.36□□□□□ -0.43
HSPG2-208ENST00000471322 CSMD3Q7Z407 3707 aa12.35□□□□□ -0.43
HSPG2-208ENST00000471322 CRYBA4P53673 196 aa12.35□□□□□ -0.43
HSPG2-208ENST00000471322 UBE2D3P61077 147 aa12.35□□□□□ -0.43
HSPG2-208ENST00000471322 UBE2D2P62837 147 aa12.35□□□□□ -0.43
HSPG2-208ENST00000471322 SLC25A34Q6PIV7 304 aa12.35□□□□□ -0.43
HSPG2-208ENST00000471322 MRPL52Q86TS9 123 aaKnown RBP12.35□□□□□ -0.43
HSPG2-208ENST00000471322 HNRNPA3P51991 378 aaKnown RBP12.34□□□□□ -0.43
HSPG2-208ENST00000471322 STPG4Q8N801 248 aa12.34□□□□□ -0.43
HSPG2-208ENST00000471322 PHLDA1Q8WV24 401 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-208ENST00000471322 CST9LQ9H4G1 147 aa12.34□□□□□ -0.43
HSPG2-208ENST00000471322 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.43
HSPG2-208ENST00000471322 COX8AP10176 69 aa12.33□□□□□ -0.43
HSPG2-208ENST00000471322 CHCHD7Q9BUK0 85 aa12.33□□□□□ -0.43
HSPG2-208ENST00000471322 SPANXA1Q9NS26 97 aa12.33□□□□□ -0.43
HSPG2-208ENST00000471322 GAGE12JA6NER3 117 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 GAGE1Q13065 139 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 GAGE4Q13068 117 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 GAGE5Q13069 117 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 ANKRD39Q53RE8 183 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 FAM222AQ5U5X8 452 aa12.33□□□□□ -0.44
HSPG2-208ENST00000471322 MRPS16Q9Y3D3 137 aaKnown RBP12.33□□□□□ -0.44
HSPG2-208ENST00000471322 STARD9Q9P2P6 4700 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 IGHV3-38A0A0C4DH36 116 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 A0A0J9YWU9 116 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 DEFB4AO15263 64 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 SMAGPQ0VAQ4 97 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 GTSF1LQ9H1H1 148 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 VCX2Q9H322 139 aa12.32□□□□□ -0.44
HSPG2-208ENST00000471322 ZC2HC1BQ5TFG8 222 aa12.31□□□□□ -0.44
HSPG2-208ENST00000471322 Q8NAQ8 132 aa12.31□□□□□ -0.44
HSPG2-208ENST00000471322 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
HSPG2-208ENST00000471322 IGLV4-3A0A075B6K6 122 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 TEX48A0A1B0GUV7 120 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 M0R143 59 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 DLEU1O43261 78 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 SPART-AS1P0CW21 52 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 LBHQ53QV2 105 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-208ENST00000471322 CTAG1AP78358 180 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 TMEM97Q5BJF2 176 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 PRO0255Q9UI72 69 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
HSPG2-208ENST00000471322 KMT2CQ8NEZ4 4911 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms