RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CTDSP1Q9GZU7 261 aa13.22□□□□□ -0.29
HDAC7-220ENST00000471235 ELOBQ15370 118 aa13.21□□□□□ -0.29
HDAC7-220ENST00000471235 Q8N976 141 aa13.21□□□□□ -0.29
HDAC7-220ENST00000471235 IMMP2LQ96T52 175 aa13.21□□□□□ -0.29
HDAC7-220ENST00000471235 PKHD1P08F94 4074 aa13.2□□□□□ -0.3
HDAC7-220ENST00000471235 TRAV8-3A0A0A6YYJ7 113 aa13.2□□□□□ -0.3
HDAC7-220ENST00000471235 I3L3M4 83 aa13.2□□□□□ -0.3
HDAC7-220ENST00000471235 APCSP02743 223 aa13.2□□□□□ -0.3
HDAC7-220ENST00000471235 POLR2KP53803 58 aaKnown RBP13.2□□□□□ -0.3
HDAC7-220ENST00000471235 RBX1P62877 108 aa13.2□□□□□ -0.3
HDAC7-220ENST00000471235 BTF3L4Q96K17 158 aa13.2□□□□□ -0.3
HDAC7-220ENST00000471235 PPP1R17O96001 155 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 TSHBP01222 138 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 ANGP03950 147 aaKnown RBP13.19□□□□□ -0.3
HDAC7-220ENST00000471235 PMCHP20382 165 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 CKS2P33552 79 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 CLRN3Q8NCR9 226 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 UBE2WQ96B02 151 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 TMEM242Q9NWH2 141 aa13.19□□□□□ -0.3
HDAC7-220ENST00000471235 TRBV27A0A0K0K1C4 114 aa13.18□□□□□ -0.3
HDAC7-220ENST00000471235 C7orf77A4D0Y5 90 aa13.18□□□□□ -0.3
HDAC7-220ENST00000471235 D6R8Y8 96 aa13.18□□□□□ -0.3
HDAC7-220ENST00000471235 PSCAO43653 123 aa13.18□□□□□ -0.3
HDAC7-220ENST00000471235 SUMO2P61956 95 aaKnown RBP13.18□□□□□ -0.3
HDAC7-220ENST00000471235 UBE2L6O14933 153 aa13.17□□□□□ -0.3
HDAC7-220ENST00000471235 RHEBQ15382 184 aa13.17□□□□□ -0.3
HDAC7-220ENST00000471235 DYNC1H1Q14204 4646 aaKnown RBP13.16□□□□□ -0.3
HDAC7-220ENST00000471235 A0A087WTM6 91 aa13.16□□□□□ -0.3
HDAC7-220ENST00000471235 ENHOQ6UWT2 76 aa13.16□□□□□ -0.3
HDAC7-220ENST00000471235 TM2D2Q9BX73 214 aa13.16□□□□□ -0.3
HDAC7-220ENST00000471235 IGLV4-60A0A075B6I1 120 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 TRBV24-1A0A075B6N3 115 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-220ENST00000471235 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 IGKV2-29A2NJV5 120 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-220ENST00000471235 TNFRSF6BO95407 300 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 NPYP01303 97 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 CRPP02741 224 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 CLPSL2Q6UWE3 100 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 SPATA12Q7Z6I5 190 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 RMI2Q96E14 147 aa13.15□□□□□ -0.3
HDAC7-220ENST00000471235 IGKV2D-24A0A075B6R9 120 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 A0A1B0GUV1 79 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 LRCOL1A6NCL2 159 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 PPBPP02775 128 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 KRTAP10-2P60368 255 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 Q0VG73 95 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 C20orf78Q9BR46 151 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 RPS10P5Q9NQ39 176 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 PRR34Q9NV39 138 aa13.14□□□□□ -0.31
HDAC7-220ENST00000471235 VCYO14598 125 aa13.13□□□□□ -0.31
HDAC7-220ENST00000471235 APOC3P02656 99 aa13.13□□□□□ -0.31
HDAC7-220ENST00000471235 ESDP10768 282 aa13.13□□□□□ -0.31
HDAC7-220ENST00000471235 ORMDL3Q8N138 153 aa13.13□□□□□ -0.31
HDAC7-220ENST00000471235 LINC00269Q8N2A0 174 aa13.13□□□□□ -0.31
HDAC7-220ENST00000471235 H7C423 109 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 PHOX2AO14813 284 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 EREGO14944 169 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 S100PP25815 95 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
HDAC7-220ENST00000471235 NDUFA5Q16718 116 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 TMEM136Q6ZRR5 245 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 SMIM2Q9BVW6 85 aa13.12□□□□□ -0.31
HDAC7-220ENST00000471235 MIAQ16674 131 aa13.11□□□□□ -0.31
HDAC7-220ENST00000471235 MAPKAPK5-AS1Q8N8E1 139 aa13.11□□□□□ -0.31
HDAC7-220ENST00000471235 PRELID3AQ96N28 172 aa13.11□□□□□ -0.31
HDAC7-220ENST00000471235 COX11Q9Y6N1 276 aa13.11□□□□□ -0.31
HDAC7-220ENST00000471235 FGF6P10767 208 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 FCER1GP30273 86 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 REG3AQ06141 175 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 WFDC2Q14508 124 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 AMMECR1LQ6DCA0 310 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 SVBPQ8N300 66 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 C1orf43Q9BWL3 253 aa13.1□□□□□ -0.31
HDAC7-220ENST00000471235 C16orf90A8MZG2 172 aa13.09□□□□□ -0.31
HDAC7-220ENST00000471235 RNASEKQ6P5S7 137 aaKnown RBP13.09□□□□□ -0.31
HDAC7-220ENST00000471235 DNAH5Q8TE73 4624 aa13.09□□□□□ -0.31
HDAC7-220ENST00000471235 SNAPINO95295 136 aa13.08□□□□□ -0.32
HDAC7-220ENST00000471235 FUSP35637 526 aaKnown RBP eCLIP13.08□□□□□ -0.32
HDAC7-220ENST00000471235 LECT2O14960 151 aa13.07□□□□□ -0.32
HDAC7-220ENST00000471235 ZNF25P17030 456 aaPredicted RBP13.07□□□□□ -0.32
HDAC7-220ENST00000471235 LAMTOR2Q9Y2Q5 125 aa13.07□□□□□ -0.32
HDAC7-220ENST00000471235 SLC7A5P1Q8MH63 180 aa13.06□□□□□ -0.32
HDAC7-220ENST00000471235 Q8N814 137 aa13.06□□□□□ -0.32
HDAC7-220ENST00000471235 BAALCQ8WXS3 180 aa13.06□□□□□ -0.32
HDAC7-220ENST00000471235 HLA-DQA1P01909 254 aa13.05□□□□□ -0.32
HDAC7-220ENST00000471235 KRTAP26-1Q6PEX3 210 aa13.05□□□□□ -0.32
HDAC7-220ENST00000471235 MRPL52Q86TS9 123 aaKnown RBP13.05□□□□□ -0.32
HDAC7-220ENST00000471235 IGLV10-54A0A075B6I4 117 aa13.04□□□□□ -0.32
HDAC7-220ENST00000471235 TCAPO15273 167 aa13.04□□□□□ -0.32
HDAC7-220ENST00000471235 CDPF1Q6NVV7 123 aa13.04□□□□□ -0.32
HDAC7-220ENST00000471235 MAP1LC3AQ9H492 121 aa13.04□□□□□ -0.32
HDAC7-220ENST00000471235 PRSS47A8MTI9 375 aa13.03□□□□□ -0.32
HDAC7-220ENST00000471235 KIAA1644Q3SXP7 199 aa13.03□□□□□ -0.32
HDAC7-220ENST00000471235 OR5A1Q8NGJ0 315 aa13.03□□□□□ -0.32
HDAC7-220ENST00000471235 TMEM101Q96IK0 257 aa13.03□□□□□ -0.32
HDAC7-220ENST00000471235 GNB1LQ9BYB4 327 aa13.03□□□□□ -0.32
HDAC7-220ENST00000471235 PGPEP1Q9NXJ5 209 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms