RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 REG3AQ06141 175 aa4.85□□□□□ -1.63
LSM2-210ENST00000470086 LRRC37A5PQ49AS3 106 aa4.85□□□□□ -1.63
LSM2-210ENST00000470086 C12orf45Q8N5I9 185 aaPredicted RBP4.85□□□□□ -1.63
LSM2-210ENST00000470086 SCGB3A2Q96PL1 93 aa4.85□□□□□ -1.63
LSM2-210ENST00000470086 RETNLBQ9BQ08 111 aa4.85□□□□□ -1.63
LSM2-210ENST00000470086 LSM5Q9Y4Y9 91 aaKnown RBP4.85□□□□□ -1.63
LSM2-210ENST00000470086 CSN1S1P47710 185 aa4.84□□□□□ -1.63
LSM2-210ENST00000470086 Q75L30 129 aa4.84□□□□□ -1.63
LSM2-210ENST00000470086 SLIRPQ9GZT3 109 aaKnown RBP4.84□□□□□ -1.63
LSM2-210ENST00000470086 GSKIPQ9P0R6 139 aa4.84□□□□□ -1.63
LSM2-210ENST00000470086 USH2AO75445 5202 aa4.84□□□□□ -1.64
LSM2-210ENST00000470086 TRBV7-3A0A075B6L6 115 aa4.83□□□□□ -1.64
LSM2-210ENST00000470086 PPP1R2P9O14990 202 aa4.83□□□□□ -1.64
LSM2-210ENST00000470086 RPS10P46783 165 aaKnown RBP4.83□□□□□ -1.64
LSM2-210ENST00000470086 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
LSM2-210ENST00000470086 OR10G8Q8NGN5 311 aa4.83□□□□□ -1.64
LSM2-210ENST00000470086 C15orf40Q8WUR7 153 aa4.83□□□□□ -1.64
LSM2-210ENST00000470086 SH3BGRL3Q9H299 93 aa4.83□□□□□ -1.64
LSM2-210ENST00000470086 FLGP20930 4061 aaPredicted RBP4.82□□□□□ -1.64
LSM2-210ENST00000470086 H0Y9J4 135 aa4.82□□□□□ -1.64
LSM2-210ENST00000470086 RPL36AP83881 106 aaKnown RBP4.82□□□□□ -1.64
LSM2-210ENST00000470086 C1orf137Q5JT78 98 aa4.82□□□□□ -1.64
LSM2-210ENST00000470086 TRIQKQ629K1 86 aa4.82□□□□□ -1.64
LSM2-210ENST00000470086 RPL36ALQ969Q0 106 aaKnown RBP4.82□□□□□ -1.64
LSM2-210ENST00000470086 SFRP2Q96HF1 295 aa4.82□□□□□ -1.64
LSM2-210ENST00000470086 OTORQ9NRC9 128 aa4.82□□□□□ -1.64
LSM2-210ENST00000470086 A0A1B0GV72 72 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 GRIFINA4D1Z8 144 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 K7EN84 100 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 SSNA1O43805 119 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 BTCP35070 178 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 SEC61BP60468 96 aaKnown RBP4.81□□□□□ -1.64
LSM2-210ENST00000470086 BLOC1S1P78537 153 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 TAL2Q16559 108 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 TMEM252Q8N6L7 170 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 NMES1Q9C002 83 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
LSM2-210ENST00000470086 LYRM2Q9NU23 88 aaPredicted RBP4.81□□□□□ -1.64
LSM2-210ENST00000470086 IL36BQ9NZH7 164 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 V9GYH0 126 aa4.81□□□□□ -1.64
LSM2-210ENST00000470086 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
LSM2-210ENST00000470086 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 ATP6V1G2O95670 118 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 ARMS2P0C7Q2 107 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 SULT1A1P50225 295 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 DEFA3P59666 94 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 S100A10P60903 97 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 CYCSP99999 105 aaKnown RBP4.8□□□□□ -1.64
LSM2-210ENST00000470086 PIK3CD-AS1Q5SR53 167 aa4.8□□□□□ -1.64
LSM2-210ENST00000470086 ZNF471Q9BX82 626 aaPredicted RBP4.8□□□□□ -1.64
LSM2-210ENST00000470086 IGLV1-50A0A075B6I6 118 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 PIGBOS1A0A0B4J2F0 54 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 M0R381 172 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 HMGB3O15347 200 aaKnown RBP4.79□□□□□ -1.64
LSM2-210ENST00000470086 IFNA7P01567 189 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 MT-ND6P03923 174 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 PVALBP20472 110 aaPredicted RBP4.79□□□□□ -1.64
LSM2-210ENST00000470086 AMTP48728 403 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 CRIP1P50238 77 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 FLI1Q01543 452 aaPredicted RBP4.79□□□□□ -1.64
LSM2-210ENST00000470086 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 OR5AC2Q9NZP5 309 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 PSG8Q9UQ74 426 aa4.79□□□□□ -1.64
LSM2-210ENST00000470086 A0A087X002 238 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 TRBV6-1A0A0K0K1D8 114 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 TCRAP04437 139 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 S100A4P26447 101 aaKnown RBP4.78□□□□□ -1.64
LSM2-210ENST00000470086 MT1HP80294 61 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 PRNTQ86SH4 94 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 MRPL52Q86TS9 123 aaKnown RBP4.78□□□□□ -1.64
LSM2-210ENST00000470086 OR5C1Q8NGR4 320 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 CMTM2Q8TAZ6 248 aa4.78□□□□□ -1.64
LSM2-210ENST00000470086 SLC25A21Q9BQT8 299 aaPredicted RBP4.78□□□□□ -1.64
LSM2-210ENST00000470086 WDR61Q9GZS3 305 aaKnown RBP4.78□□□□□ -1.64
LSM2-210ENST00000470086 A0A087WXM4 84 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 TMSB15BA0A087X1C1 80 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 IGKV3OR2-268A0A0C4DH90 116 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 KRBOX1C9JBD0 128 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 NDUFB6O95139 128 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 BCL2P10415 239 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 S100A11P31949 105 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 LINC01547P58512 204 aaPredicted RBP4.77□□□□□ -1.65
LSM2-210ENST00000470086 IL15RAQ13261 267 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 ZNF56Q15929 161 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 IQCJQ1A5X6 159 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 KHDC3LQ587J8 217 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 TOMM5Q8N4H5 51 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 FER1L6-AS1Q8NA97 138 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 DIRC1Q969H9 104 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 DERL1Q9BUN8 251 aa4.77□□□□□ -1.65
LSM2-210ENST00000470086 TRAV8-4A0A0B4J246 113 aa4.76□□□□□ -1.65
LSM2-210ENST00000470086 MUC21A0A140T8X8 626 aa4.76□□□□□ -1.65
LSM2-210ENST00000470086 FAM168BA1KXE4 195 aa4.76□□□□□ -1.65
LSM2-210ENST00000470086 B4DEV8 164 aa4.76□□□□□ -1.65
LSM2-210ENST00000470086 P01737 135 aa4.76□□□□□ -1.65
LSM2-210ENST00000470086 FAUP35544 74 aaKnown RBP4.76□□□□□ -1.65
LSM2-210ENST00000470086 FOXI1Q12951 378 aa4.76□□□□□ -1.65
LSM2-210ENST00000470086 TPRXLQ17RH7 258 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms