RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
EFNA1-203ENST00000469878 H7C1H1 209 aa8.68□□□□□ -1.02
EFNA1-203ENST00000469878 DPH3P1Q9H4G8 78 aa8.68□□□□□ -1.02
EFNA1-203ENST00000469878 TEX46H3BTG2 121 aa8.67□□□□□ -1.02
EFNA1-203ENST00000469878 TRGC1P0CF51 173 aa8.67□□□□□ -1.02
EFNA1-203ENST00000469878 FOXA3P55318 350 aaPredicted RBP8.67□□□□□ -1.02
EFNA1-203ENST00000469878 C9orf163Q8N9P6 203 aa8.67□□□□□ -1.02
EFNA1-203ENST00000469878 TMEM243Q9BU79 118 aa8.67□□□□□ -1.02
EFNA1-203ENST00000469878 F2Z2F3 143 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 SLPIP03973 132 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 TWIST1Q15672 202 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 GATD1Q8NB37 220 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 OCC1Q8TAD7 63 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 RPL39LQ96EH5 51 aaKnown RBP8.66□□□□□ -1.02
EFNA1-203ENST00000469878 NIT2Q9NQR4 276 aa8.66□□□□□ -1.02
EFNA1-203ENST00000469878 hDV102S1A0JD36 115 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 XKRY2A2RUG3 117 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 AMTP48728 403 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 RPL37AP61513 92 aaKnown RBP8.65□□□□□ -1.02
EFNA1-203ENST00000469878 DGAT2L7PQ6IED9 249 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 PGLYRP4Q96LB8 373 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 CNFNQ9BYD5 112 aa8.65□□□□□ -1.02
EFNA1-203ENST00000469878 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.02
EFNA1-203ENST00000469878 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
EFNA1-203ENST00000469878 CHTF8P0CG12 524 aa8.64□□□□□ -1.03
EFNA1-203ENST00000469878 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
EFNA1-203ENST00000469878 IGKV3OR2-268A0A0C4DH90 116 aa8.63□□□□□ -1.03
EFNA1-203ENST00000469878 C9JQL5 133 aa8.63□□□□□ -1.03
EFNA1-203ENST00000469878 GAS8-AS1O95177 125 aa8.63□□□□□ -1.03
EFNA1-203ENST00000469878 FAM210AQ96ND0 272 aa8.63□□□□□ -1.03
EFNA1-203ENST00000469878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.62□□□□□ -1.03
EFNA1-203ENST00000469878 IGKV2-29A2NJV5 120 aaPredicted RBP8.62□□□□□ -1.03
EFNA1-203ENST00000469878 UBE2L6O14933 153 aa8.62□□□□□ -1.03
EFNA1-203ENST00000469878 CNBPP62633 177 aaKnown RBP8.62□□□□□ -1.03
EFNA1-203ENST00000469878 COTL1Q14019 142 aa8.62□□□□□ -1.03
EFNA1-203ENST00000469878 WDR73Q6P4I2 378 aa8.62□□□□□ -1.03
EFNA1-203ENST00000469878 C15orf56Q8N910 161 aa8.62□□□□□ -1.03
EFNA1-203ENST00000469878 BIN3Q9NQY0 253 aa8.62□□□□□ -1.03
EFNA1-203ENST00000469878 TRAV8-4A0A0B4J246 113 aa8.61□□□□□ -1.03
EFNA1-203ENST00000469878 GAGE12HA6NDE8 117 aa8.61□□□□□ -1.03
EFNA1-203ENST00000469878 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
EFNA1-203ENST00000469878 CLRN3Q8NCR9 226 aa8.61□□□□□ -1.03
EFNA1-203ENST00000469878 TAGLN2P37802 199 aaKnown RBP8.6□□□□□ -1.03
EFNA1-203ENST00000469878 CIRBPQ14011 172 aaKnown RBP8.6□□□□□ -1.03
EFNA1-203ENST00000469878 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
EFNA1-203ENST00000469878 OXTP01178 125 aa8.59□□□□□ -1.03
EFNA1-203ENST00000469878 CEBPGP53567 150 aa8.59□□□□□ -1.03
EFNA1-203ENST00000469878 HIGD2BQ4VC39 106 aa8.59□□□□□ -1.03
EFNA1-203ENST00000469878 HMCN2Q8NDA2 5059 aa8.58□□□□□ -1.04
EFNA1-203ENST00000469878 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
EFNA1-203ENST00000469878 SDHAF1A6NFY7 115 aa8.58□□□□□ -1.04
EFNA1-203ENST00000469878 TMEM250H0YL14 139 aa8.58□□□□□ -1.04
EFNA1-203ENST00000469878 GATCO43716 136 aaKnown RBP8.58□□□□□ -1.04
EFNA1-203ENST00000469878 SPACA4Q8TDM5 124 aa8.58□□□□□ -1.04
EFNA1-203ENST00000469878 A0A087WYN8 130 aa8.57□□□□□ -1.04
EFNA1-203ENST00000469878 APCSP02743 223 aa8.57□□□□□ -1.04
EFNA1-203ENST00000469878 FGF6P10767 208 aa8.57□□□□□ -1.04
EFNA1-203ENST00000469878 CLLU1Q5K131 121 aa8.57□□□□□ -1.04
EFNA1-203ENST00000469878 RNASEKQ6P5S7 137 aaKnown RBP8.57□□□□□ -1.04
EFNA1-203ENST00000469878 CHCHD10Q8WYQ3 142 aaPredicted RBP8.57□□□□□ -1.04
EFNA1-203ENST00000469878 AP5S1Q9NUS5 200 aa8.57□□□□□ -1.04
EFNA1-203ENST00000469878 FAM231BA6NCW3 169 aa8.56□□□□□ -1.04
EFNA1-203ENST00000469878 NDUFS6O75380 124 aaKnown RBP8.56□□□□□ -1.04
EFNA1-203ENST00000469878 AMMECR1LQ6DCA0 310 aa8.56□□□□□ -1.04
EFNA1-203ENST00000469878 FAM231DQ6ZW35 169 aa8.56□□□□□ -1.04
EFNA1-203ENST00000469878 TSHBP01222 138 aa8.55□□□□□ -1.04
EFNA1-203ENST00000469878 RPS10P46783 165 aaKnown RBP8.55□□□□□ -1.04
EFNA1-203ENST00000469878 COX6A2Q02221 97 aa8.55□□□□□ -1.04
EFNA1-203ENST00000469878 TMEM242Q9NWH2 141 aa8.55□□□□□ -1.04
EFNA1-203ENST00000469878 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.54□□□□□ -1.04
EFNA1-203ENST00000469878 NCR2O95944 276 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 RAB14P61106 215 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 FOXI1Q12951 378 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 LINC01551Q86U37 167 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 PRSS3P2Q8NHM4 247 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 LINC00526Q96FQ7 95 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
EFNA1-203ENST00000469878 IGKV2-24A0A0C4DH68 120 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 TRBV6-5A0A0K0K1A5 114 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 A8MWL6 223 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 I3L3M4 83 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 XCL1P47992 114 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 PEA15Q15121 130 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 CT83Q5H943 113 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 SERTAD4-AS1Q5TG53 156 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 DPH3Q96FX2 82 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 SMIM7Q9BQ49 75 aa8.53□□□□□ -1.04
EFNA1-203ENST00000469878 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
EFNA1-203ENST00000469878 ZNF727A8MUV8 499 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 HIGD1CA8MV81 97 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 H7C423 109 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 PHOX2AO14813 284 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 ESDP10768 282 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 PMCHP20382 165 aa8.52□□□□□ -1.05
EFNA1-203ENST00000469878 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms