RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 MAPK1IP1LQ8NDC0 245 aa13.47□□□□□ -0.25
SNAPC3-205ENST00000467062 TMEM223A0PJW6 202 aa13.46□□□□□ -0.25
SNAPC3-205ENST00000467062 LINC00643Q86TS7 51 aa13.46□□□□□ -0.26
SNAPC3-205ENST00000467062 KLK5Q9Y337 293 aaPredicted RBP13.46□□□□□ -0.26
SNAPC3-205ENST00000467062 U3KQE9 123 aa13.46□□□□□ -0.26
SNAPC3-205ENST00000467062 COX7CP15954 63 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 KLK9Q2XQG4 91 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 C19orf54Q5BKX5 351 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 GPHB5Q86YW7 130 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 TIMM17AQ99595 171 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 EDA2RQ9HAV5 297 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 KLK9Q9UKQ9 250 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 PTPN13Q12923 2485 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 MGPP08493 103 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 ZNF876PQ49A33 203 aa13.45□□□□□ -0.26
SNAPC3-205ENST00000467062 A0A0J9YX75 114 aa13.43□□□□□ -0.26
SNAPC3-205ENST00000467062 SDHAF1A6NFY7 115 aa13.43□□□□□ -0.26
SNAPC3-205ENST00000467062 CRYGAP11844 174 aa13.43□□□□□ -0.26
SNAPC3-205ENST00000467062 LST1O00453 97 aa13.42□□□□□ -0.26
SNAPC3-205ENST00000467062 C10orf99Q6UWK7 81 aa13.42□□□□□ -0.26
SNAPC3-205ENST00000467062 SORL1Q92673 2214 aa13.42□□□□□ -0.26
SNAPC3-205ENST00000467062 FAM223BA6NKX1 122 aa13.42□□□□□ -0.26
SNAPC3-205ENST00000467062 FAM223AQ8IWN6 122 aa13.42□□□□□ -0.26
SNAPC3-205ENST00000467062 CXCL5P42830 114 aa13.41□□□□□ -0.26
SNAPC3-205ENST00000467062 ANKRD17O75179 2603 aaKnown RBP13.41□□□□□ -0.26
SNAPC3-205ENST00000467062 C9orf47Q6ZRZ4 202 aa13.41□□□□□ -0.26
SNAPC3-205ENST00000467062 MSMBP08118 114 aa13.4□□□□□ -0.26
SNAPC3-205ENST00000467062 PHLDA3Q9Y5J5 127 aa13.4□□□□□ -0.26
SNAPC3-205ENST00000467062 TLN2Q9Y4G6 2542 aa13.4□□□□□ -0.26
SNAPC3-205ENST00000467062 PRB1P04280 392 aa13.4□□□□□ -0.26
SNAPC3-205ENST00000467062 S100A4P26447 101 aaKnown RBP13.4□□□□□ -0.26
SNAPC3-205ENST00000467062 DEFB104AQ8WTQ1 72 aa13.4□□□□□ -0.26
SNAPC3-205ENST00000467062 IGHG2P01859 326 aa13.39□□□□□ -0.27
SNAPC3-205ENST00000467062 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
SNAPC3-205ENST00000467062 A6NDX4 124 aa13.39□□□□□ -0.27
SNAPC3-205ENST00000467062 CLEC2BQ92478 149 aa13.39□□□□□ -0.27
SNAPC3-205ENST00000467062 ZNF469Q96JG9 3925 aaPredicted RBP13.38□□□□□ -0.27
SNAPC3-205ENST00000467062 RNASE4P34096 147 aaKnown RBP13.38□□□□□ -0.27
SNAPC3-205ENST00000467062 RPL39P62891 51 aaKnown RBP13.38□□□□□ -0.27
SNAPC3-205ENST00000467062 RHPN1-AS1Q9BWJ2 59 aa13.38□□□□□ -0.27
SNAPC3-205ENST00000467062 TEX15Q9BXT5 2789 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 A0A0J9YXY3 114 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 TRACP01848 142 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 USP24Q9UPU5 2620 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 NDUFA4O00483 81 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 VCYO14598 125 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 GNRH2O43555 120 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
SNAPC3-205ENST00000467062 IGHV4-59P01825 116 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 NAV2Q8IVL1 2488 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 ATOX1O00244 68 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 OVOL1O14753 267 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 PRSS2P07478 247 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 C9orf139Q6ZV77 190 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 C2orf48Q96LS8 159 aa13.36□□□□□ -0.27
SNAPC3-205ENST00000467062 TRAV8-3A0A0A6YYJ7 113 aa13.35□□□□□ -0.27
SNAPC3-205ENST00000467062 SOCS3O14543 225 aa13.35□□□□□ -0.27
SNAPC3-205ENST00000467062 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
SNAPC3-205ENST00000467062 MYO9AB2RTY4 2548 aa13.35□□□□□ -0.27
SNAPC3-205ENST00000467062 MED14OSP0DP75 135 aa13.35□□□□□ -0.27
SNAPC3-205ENST00000467062 IGHV4OR15-8A0A075B7B6 117 aa13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 A0A087WW49 117 aa13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 POLR2KP53803 58 aaKnown RBP13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 LENEPQ9Y5L5 61 aa13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 EPG5Q9HCE0 2579 aa13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 I3L3M4 83 aa13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 TMEM258P61165 79 aa13.34□□□□□ -0.27
SNAPC3-205ENST00000467062 IGHV3-64A0A075B6Q5 118 aa13.33□□□□□ -0.27
SNAPC3-205ENST00000467062 F5H768 121 aa13.33□□□□□ -0.27
SNAPC3-205ENST00000467062 DCANP1Q8TF63 244 aa13.33□□□□□ -0.27
SNAPC3-205ENST00000467062 DEFB112Q30KQ8 113 aa13.33□□□□□ -0.28
SNAPC3-205ENST00000467062 SDIM1Q6ZPB5 146 aa13.33□□□□□ -0.28
SNAPC3-205ENST00000467062 USMG5Q96IX5 58 aa13.33□□□□□ -0.28
SNAPC3-205ENST00000467062 TRAV21A0A0B4J279 112 aa13.32□□□□□ -0.28
SNAPC3-205ENST00000467062 IGKV3-20P01619 116 aa13.32□□□□□ -0.28
SNAPC3-205ENST00000467062 DPH3Q96FX2 82 aa13.32□□□□□ -0.28
SNAPC3-205ENST00000467062 NBPF19A0A087WUL8 3843 aa13.32□□□□□ -0.28
SNAPC3-205ENST00000467062 hADV29S1A0JD25 119 aa13.32□□□□□ -0.28
SNAPC3-205ENST00000467062 PEMTQ9UBM1 199 aa13.32□□□□□ -0.28
SNAPC3-205ENST00000467062 B4DSR2 109 aa13.31□□□□□ -0.28
SNAPC3-205ENST00000467062 LINC00477Q96M19 166 aa13.31□□□□□ -0.28
SNAPC3-205ENST00000467062 IGLV1-40P01703 118 aa13.31□□□□□ -0.28
SNAPC3-205ENST00000467062 LITAFQ99732 161 aa13.31□□□□□ -0.28
SNAPC3-205ENST00000467062 DUX5Q96PT3 197 aa13.3□□□□□ -0.28
SNAPC3-205ENST00000467062 DAZ1Q9NQZ3 744 aaKnown RBP13.3□□□□□ -0.28
SNAPC3-205ENST00000467062 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
SNAPC3-205ENST00000467062 HIST1H4AP62805 103 aaKnown RBP13.29□□□□□ -0.28
SNAPC3-205ENST00000467062 MRAPQ8TCY5 172 aa13.29□□□□□ -0.28
SNAPC3-205ENST00000467062 JPT2Q9H910 190 aa13.29□□□□□ -0.28
SNAPC3-205ENST00000467062 TIMM21Q9BVV7 248 aa13.28□□□□□ -0.28
SNAPC3-205ENST00000467062 NF1P21359 2839 aa13.28□□□□□ -0.28
SNAPC3-205ENST00000467062 MIAQ16674 131 aa13.28□□□□□ -0.28
SNAPC3-205ENST00000467062 HIST2H2BDQ6DRA6 164 aa13.28□□□□□ -0.28
SNAPC3-205ENST00000467062 TMEM61Q8N0U2 210 aa13.28□□□□□ -0.28
SNAPC3-205ENST00000467062 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.28
SNAPC3-205ENST00000467062 TRBV27A0A0K0K1C4 114 aa13.27□□□□□ -0.29
SNAPC3-205ENST00000467062 IGHV3-30-3P0DP02 117 aa13.27□□□□□ -0.29
SNAPC3-205ENST00000467062 RNASE3P12724 160 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms