RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 LAMC1P11047 1609 aa-0.26□□□□□ -2.45
SMC4-205ENST00000465563 SNCGO76070 127 aa-0.26□□□□□ -2.45
SMC4-205ENST00000465563 MYO7BQ6PIF6 2116 aa-0.26□□□□□ -2.45
SMC4-205ENST00000465563 ZNF236Q9UL36 1845 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 SPAARA0A1B0GVQ0 90 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 PIN1P1O15428 100 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 SIX6O95475 246 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 CCL18P55774 89 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 BAGE3Q86Y29 109 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 PFDN5Q99471 154 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 CNFNQ9BYD5 112 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 CCDC167Q9P0B6 97 aa-0.27□□□□□ -2.45
SMC4-205ENST00000465563 SPINK8P0C7L1 97 aa-0.28□□□□□ -2.45
SMC4-205ENST00000465563 PAIP2BQ9ULR5 123 aaKnown RBP-0.28□□□□□ -2.45
SMC4-205ENST00000465563 ARAP2Q8WZ64 1704 aa-0.28□□□□□ -2.45
SMC4-205ENST00000465563 FLNCQ14315 2725 aa-0.29□□□□□ -2.46
SMC4-205ENST00000465563 VWFP04275 2813 aa-0.29□□□□□ -2.46
SMC4-205ENST00000465563 DSTQ03001 7570 aaKnown RBP-0.29□□□□□ -2.46
SMC4-205ENST00000465563 FAM92AA1XBS5 289 aa-0.29□□□□□ -2.46
SMC4-205ENST00000465563 HCG22E2RYF7 251 aa-0.29□□□□□ -2.46
SMC4-205ENST00000465563 SEC11CQ9BY50 192 aa-0.29□□□□□ -2.46
SMC4-205ENST00000465563 NHSL1Q5SYE7 1610 aa-0.3□□□□□ -2.46
SMC4-205ENST00000465563 HIST1H1DP16402 221 aaKnown RBP-0.3□□□□□ -2.46
SMC4-205ENST00000465563 LSM10Q969L4 123 aaKnown RBP-0.3□□□□□ -2.46
SMC4-205ENST00000465563 AGPAT4-IT1Q9H0P7 198 aa-0.3□□□□□ -2.46
SMC4-205ENST00000465563 PTPN13Q12923 2485 aa-0.3□□□□□ -2.46
SMC4-205ENST00000465563 ARPC4P59998 168 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 CFAP126Q5VTH2 177 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 Q8N8P6 123 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 CFTRP13569 1480 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 MRC1P22897 1456 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 ZNF609O15014 1411 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 CHD6Q8TD26 2715 aa-0.31□□□□□ -2.46
SMC4-205ENST00000465563 A0A0D9SFI3 127 aa-0.32□□□□□ -2.46
SMC4-205ENST00000465563 NDUFA2O43678 99 aa-0.32□□□□□ -2.46
SMC4-205ENST00000465563 PSME4Q14997 1843 aa-0.33□□□□□ -2.46
SMC4-205ENST00000465563 PKD1L1Q8TDX9 2849 aa-0.33□□□□□ -2.46
SMC4-205ENST00000465563 TRAV13-2A0A0B4J235 113 aa-0.33□□□□□ -2.46
SMC4-205ENST00000465563 PRO0255Q9UI72 69 aa-0.33□□□□□ -2.46
SMC4-205ENST00000465563 TENM4Q6N022 2769 aa-0.33□□□□□ -2.46
SMC4-205ENST00000465563 LRRC37A2A6NM11 1700 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 PPP1R17O96001 155 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 SELENOWP63302 87 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 RBM3P98179 157 aaKnown RBP-0.34□□□□□ -2.46
SMC4-205ENST00000465563 Q6AWC8 147 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 CSPG4Q6UVK1 2322 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 PDCD10Q9BUL8 212 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 SNRNP25Q9BV90 132 aaKnown RBP-0.34□□□□□ -2.46
SMC4-205ENST00000465563 LINC00470Q9BZP3 86 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 RERGLQ9H628 205 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 SCN3BQ9NY72 215 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 GVINP1Q7Z2Y8 2422 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 SBF2Q86WG5 1849 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 PPRC1Q5VV67 1664 aaKnown RBP-0.34□□□□□ -2.46
SMC4-205ENST00000465563 KMT2AQ03164 3969 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 GOLGA4Q13439 2230 aaKnown RBP-0.34□□□□□ -2.46
SMC4-205ENST00000465563 MUC12Q9UKN1 5478 aa-0.34□□□□□ -2.46
SMC4-205ENST00000465563 LRP6O75581 1613 aa-0.35□□□□□ -2.46
SMC4-205ENST00000465563 STAB1Q9NY15 2570 aa-0.35□□□□□ -2.46
SMC4-205ENST00000465563 C10orf142B7Z368 130 aa-0.35□□□□□ -2.47
SMC4-205ENST00000465563 M0R135 149 aa-0.35□□□□□ -2.47
SMC4-205ENST00000465563 SMIM6P0DI80 62 aa-0.35□□□□□ -2.47
SMC4-205ENST00000465563 IFITM1P13164 125 aa-0.35□□□□□ -2.47
SMC4-205ENST00000465563 SERP1Q9Y6X1 66 aa-0.35□□□□□ -2.47
SMC4-205ENST00000465563 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.36□□□□□ -2.47
SMC4-205ENST00000465563 WFDC2Q14508 124 aa-0.36□□□□□ -2.47
SMC4-205ENST00000465563 C12orf73Q69YU5 71 aa-0.36□□□□□ -2.47
SMC4-205ENST00000465563 AMELXQ99217 191 aa-0.36□□□□□ -2.47
SMC4-205ENST00000465563 LENEPQ9Y5L5 61 aa-0.36□□□□□ -2.47
SMC4-205ENST00000465563 R4GMQ9 66 aa-0.36□□□□□ -2.47
SMC4-205ENST00000465563 MYCBP2O75592 4640 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 PPIP5K1Q6PFW1 1433 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 BCE1O60756 84 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 BTG2P78543 158 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 C10orf128Q5T292 105 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 ARL11Q969Q4 196 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 TCHHQ07283 1943 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 MBD5Q9P267 1494 aa-0.37□□□□□ -2.47
SMC4-205ENST00000465563 M0R3E3 92 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 GNG7O60262 68 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 CFDP00746 253 aaPredicted RBP-0.38□□□□□ -2.47
SMC4-205ENST00000465563 S100A12P80511 92 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 KRTAP19-7Q3SYF9 63 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 Q5VSD8 79 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 COPS9Q8WXC6 57 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 LINC00472Q9H8W2 130 aa-0.38□□□□□ -2.47
SMC4-205ENST00000465563 SRRM2Q9UQ35 2752 aaKnown RBP-0.38□□□□□ -2.47
SMC4-205ENST00000465563 KIF21AQ7Z4S6 1674 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 QRICH2Q9H0J4 1663 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 BCL9LQ86UU0 1499 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 MUC2Q02817 5179 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 SPAG11BQ08648 103 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 CCDC58Q4VC31 144 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 MEIG1Q5JSS6 88 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 SPAG11AQ6PDA7 123 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 TTC9CQ8N5M4 171 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 AQP10Q96PS8 301 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 SHROOM2Q13796 1616 aa-0.39□□□□□ -2.47
SMC4-205ENST00000465563 LRP2P98164 4655 aa-0.4□□□□□ -2.47
SMC4-205ENST00000465563 K7EP13 123 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms