RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 ATP6V0E2Q8NHE4 81 aa11.95□□□□□ -0.5
PTPRU-206ENST00000465525 TRBV27A0A0K0K1C4 114 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 PRSS47A8MTI9 375 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 H3BNG1 76 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 I3L3M4 83 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 S100A12P80511 92 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 FA2HQ7L5A8 372 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 C3orf84H3BNL1 204 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 SERF1AO75920 110 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 TSHBP01222 138 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 LINC00310P59036 64 aa11.94□□□□□ -0.5
PTPRU-206ENST00000465525 NXT2Q9NPJ8 142 aaKnown RBP11.94□□□□□ -0.5
PTPRU-206ENST00000465525 NUPR1O60356 82 aa11.93□□□□□ -0.5
PTPRU-206ENST00000465525 ESDP10768 282 aa11.93□□□□□ -0.5
PTPRU-206ENST00000465525 RPL32P62910 135 aaKnown RBP11.93□□□□□ -0.5
PTPRU-206ENST00000465525 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
PTPRU-206ENST00000465525 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
PTPRU-206ENST00000465525 FCER1GP30273 86 aa11.92□□□□□ -0.5
PTPRU-206ENST00000465525 PMCHL1Q16048 86 aa11.92□□□□□ -0.5
PTPRU-206ENST00000465525 PYY3Q5JQD4 70 aa11.92□□□□□ -0.5
PTPRU-206ENST00000465525 KIR2DL4Q99706 377 aa11.92□□□□□ -0.5
PTPRU-206ENST00000465525 LINC00614P0C842 121 aa11.91□□□□□ -0.5
PTPRU-206ENST00000465525 NTM-AS1Q6ZSK4 140 aa11.91□□□□□ -0.5
PTPRU-206ENST00000465525 CSMD3Q7Z407 3707 aa11.91□□□□□ -0.5
PTPRU-206ENST00000465525 TCTAP57738 103 aa11.91□□□□□ -0.5
PTPRU-206ENST00000465525 COTL1Q14019 142 aa11.91□□□□□ -0.5
PTPRU-206ENST00000465525 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
PTPRU-206ENST00000465525 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.5
PTPRU-206ENST00000465525 GTSF1LQ9H1H1 148 aa11.9□□□□□ -0.5
PTPRU-206ENST00000465525 JOSD1Q15040 202 aaPredicted RBP11.89□□□□□ -0.51
PTPRU-206ENST00000465525 CASC10Q5T4H9 136 aa11.89□□□□□ -0.51
PTPRU-206ENST00000465525 AP5S1Q9NUS5 200 aa11.89□□□□□ -0.51
PTPRU-206ENST00000465525 AMTP48728 403 aa11.88□□□□□ -0.51
PTPRU-206ENST00000465525 LAGE3Q14657 143 aa11.88□□□□□ -0.51
PTPRU-206ENST00000465525 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
PTPRU-206ENST00000465525 LINC01546A6NGU7 62 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 LYPD5Q6UWN5 251 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 SH2D6Q7Z4S9 175 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 CHCHD1Q96BP2 118 aaKnown RBP11.87□□□□□ -0.51
PTPRU-206ENST00000465525 APLNQ9ULZ1 77 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 DYNC2H1Q8NCM8 4307 aaKnown RBP11.87□□□□□ -0.51
PTPRU-206ENST00000465525 HSBP1O75506 76 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 ESRGQ1W209 222 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
PTPRU-206ENST00000465525 STARD9Q9P2P6 4700 aa11.86□□□□□ -0.51
PTPRU-206ENST00000465525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
PTPRU-206ENST00000465525 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
PTPRU-206ENST00000465525 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
PTPRU-206ENST00000465525 BTF3P20290 206 aaKnown RBP11.86□□□□□ -0.51
PTPRU-206ENST00000465525 IGHV1-24A0A0C4DH33 117 aa11.85□□□□□ -0.51
PTPRU-206ENST00000465525 RPL39P62891 51 aaKnown RBP11.85□□□□□ -0.51
PTPRU-206ENST00000465525 A0A096LNJ9 63 aa11.84□□□□□ -0.51
PTPRU-206ENST00000465525 ORMDL2Q53FV1 153 aa11.84□□□□□ -0.51
PTPRU-206ENST00000465525 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
PTPRU-206ENST00000465525 TRBV25-1A0A075B6N4 114 aa11.84□□□□□ -0.51
PTPRU-206ENST00000465525 CHCHD5Q9BSY4 110 aa11.84□□□□□ -0.51
PTPRU-206ENST00000465525 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
PTPRU-206ENST00000465525 GAGE6Q13070 117 aa11.83□□□□□ -0.52
PTPRU-206ENST00000465525 C20orf203Q8NBC4 194 aa11.83□□□□□ -0.52
PTPRU-206ENST00000465525 K7EMI3 77 aa11.82□□□□□ -0.52
PTPRU-206ENST00000465525 TMEM97Q5BJF2 176 aa11.82□□□□□ -0.52
PTPRU-206ENST00000465525 C2orf66Q6UXQ4 117 aa11.82□□□□□ -0.52
PTPRU-206ENST00000465525 LELP1Q5T871 98 aa11.81□□□□□ -0.52
PTPRU-206ENST00000465525 LINC00588Q9Y4M8 146 aa11.81□□□□□ -0.52
PTPRU-206ENST00000465525 HBDP02042 147 aa11.81□□□□□ -0.52
PTPRU-206ENST00000465525 Q8N3U1 123 aa11.81□□□□□ -0.52
PTPRU-206ENST00000465525 CYSLTR1Q9Y271 337 aa11.81□□□□□ -0.52
PTPRU-206ENST00000465525 PLECQ15149 4684 aaKnown RBP11.8□□□□□ -0.52
PTPRU-206ENST00000465525 UBE2L6O14933 153 aa11.8□□□□□ -0.52
PTPRU-206ENST00000465525 LINC00173Q6ZV60 143 aa11.8□□□□□ -0.52
PTPRU-206ENST00000465525 WFDC10BQ8IUB3 73 aa11.8□□□□□ -0.52
PTPRU-206ENST00000465525 TIRAPP58753 221 aa11.79□□□□□ -0.52
PTPRU-206ENST00000465525 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
PTPRU-206ENST00000465525 TMEM262E9PQX1 116 aa11.78□□□□□ -0.52
PTPRU-206ENST00000465525 SCGB1D1O95968 90 aa11.78□□□□□ -0.52
PTPRU-206ENST00000465525 CCL18P55774 89 aa11.78□□□□□ -0.52
PTPRU-206ENST00000465525 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
PTPRU-206ENST00000465525 FGF6P10767 208 aa11.78□□□□□ -0.52
PTPRU-206ENST00000465525 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.53
PTPRU-206ENST00000465525 CDPF1Q6NVV7 123 aa11.77□□□□□ -0.53
PTPRU-206ENST00000465525 SCGB3A1Q96QR1 104 aa11.77□□□□□ -0.53
PTPRU-206ENST00000465525 UBE2D4Q9Y2X8 147 aa11.77□□□□□ -0.53
PTPRU-206ENST00000465525 PKIAP61925 76 aa11.76□□□□□ -0.53
PTPRU-206ENST00000465525 MPV17L2Q567V2 206 aa11.76□□□□□ -0.53
PTPRU-206ENST00000465525 RNASE13Q5GAN3 156 aaKnown RBP11.76□□□□□ -0.53
PTPRU-206ENST00000465525 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
PTPRU-206ENST00000465525 UBE2DNLQ8IWF7 75 aa11.76□□□□□ -0.53
PTPRU-206ENST00000465525 Q8N976 141 aa11.76□□□□□ -0.53
PTPRU-206ENST00000465525 MRPS16Q9Y3D3 137 aaKnown RBP11.76□□□□□ -0.53
PTPRU-206ENST00000465525 TSTD3H0UI37 97 aa11.75□□□□□ -0.53
PTPRU-206ENST00000465525 LEPROTL1O95214 131 aa11.75□□□□□ -0.53
PTPRU-206ENST00000465525 IGHV3-30P01768 117 aa11.75□□□□□ -0.53
PTPRU-206ENST00000465525 IGHV3-33P01772 117 aa11.75□□□□□ -0.53
PTPRU-206ENST00000465525 IGHV3-30-3P0DP02 117 aa11.75□□□□□ -0.53
PTPRU-206ENST00000465525 IGHV3-30-5P0DP03 117 aa11.75□□□□□ -0.53
PTPRU-206ENST00000465525 IGLV4-60A0A075B6I1 120 aa11.74□□□□□ -0.53
PTPRU-206ENST00000465525 IGIPA6NJ69 53 aa11.74□□□□□ -0.53
PTPRU-206ENST00000465525 G0S2P27469 103 aa11.74□□□□□ -0.53
PTPRU-206ENST00000465525 RBX1P62877 108 aa11.74□□□□□ -0.53
PTPRU-206ENST00000465525 ZC2HC1BQ5TFG8 222 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms