RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 A0A1B0GUV1 79 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 SNAPINO95295 136 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 AMTP48728 403 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 POLR2KP53803 58 aaKnown RBP9.23□□□□□ -0.93
LIMD1-203ENST00000465039 SUMO2P61956 95 aaKnown RBP9.23□□□□□ -0.93
LIMD1-203ENST00000465039 Q0VG73 95 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 COX19Q49B96 90 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 MRPL51Q4U2R6 128 aaKnown RBP9.23□□□□□ -0.93
LIMD1-203ENST00000465039 NRACQ8N912 160 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 RMI2Q96E14 147 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 TM2D2Q9BX73 214 aa9.23□□□□□ -0.93
LIMD1-203ENST00000465039 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
LIMD1-203ENST00000465039 VCYO14598 125 aa9.22□□□□□ -0.93
LIMD1-203ENST00000465039 APCSP02743 223 aa9.22□□□□□ -0.93
LIMD1-203ENST00000465039 CKS2P33552 79 aa9.22□□□□□ -0.93
LIMD1-203ENST00000465039 RPS10P46783 165 aaKnown RBP9.22□□□□□ -0.93
LIMD1-203ENST00000465039 ATRAIDQ6UW56 229 aa9.22□□□□□ -0.93
LIMD1-203ENST00000465039 ORMDL3Q8N138 153 aa9.22□□□□□ -0.93
LIMD1-203ENST00000465039 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
LIMD1-203ENST00000465039 EPPK1P58107 5090 aaKnown RBP9.21□□□□□ -0.94
LIMD1-203ENST00000465039 TMEM262E9PQX1 116 aa9.2□□□□□ -0.94
LIMD1-203ENST00000465039 UBE2L6O14933 153 aa9.2□□□□□ -0.94
LIMD1-203ENST00000465039 APOC3P02656 99 aa9.2□□□□□ -0.94
LIMD1-203ENST00000465039 ZNF25P17030 456 aaPredicted RBP9.2□□□□□ -0.94
LIMD1-203ENST00000465039 PMCHP20382 165 aa9.2□□□□□ -0.94
LIMD1-203ENST00000465039 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
LIMD1-203ENST00000465039 PRR34Q9NV39 138 aa9.2□□□□□ -0.94
LIMD1-203ENST00000465039 D6R8Y8 96 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 GAS8-AS1O95177 125 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 TNFRSF6BO95407 300 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 TSHBP01222 138 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 MT-ND6P03923 174 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 RBX1P62877 108 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 TNP2Q05952 138 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 SMAGPQ0VAQ4 97 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 MIAQ16674 131 aa9.19□□□□□ -0.94
LIMD1-203ENST00000465039 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 EREGO14944 169 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 CRPP02741 224 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 ESDP10768 282 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 Q8N3U1 123 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 SMIM2Q9BVW6 85 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 RPS10P5Q9NQ39 176 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
LIMD1-203ENST00000465039 SMKR1H3BMG3 65 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 K7EMI3 77 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 PSCAO43653 123 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
LIMD1-203ENST00000465039 GAGE6Q13070 117 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 TMEM136Q6ZRR5 245 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
LIMD1-203ENST00000465039 PRELID3AQ96N28 172 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 GNB1LQ9BYB4 327 aa9.17□□□□□ -0.94
LIMD1-203ENST00000465039 TRAV8-4A0A0B4J246 113 aa9.16□□□□□ -0.94
LIMD1-203ENST00000465039 FCER1GP30273 86 aa9.16□□□□□ -0.94
LIMD1-203ENST00000465039 CDPF1Q6NVV7 123 aa9.16□□□□□ -0.94
LIMD1-203ENST00000465039 Q8N976 141 aa9.16□□□□□ -0.94
LIMD1-203ENST00000465039 UBE2WQ96B02 151 aa9.16□□□□□ -0.94
LIMD1-203ENST00000465039 Q9HAA7 133 aa9.16□□□□□ -0.94
LIMD1-203ENST00000465039 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
LIMD1-203ENST00000465039 NPYP01303 97 aa9.15□□□□□ -0.94
LIMD1-203ENST00000465039 AMMECR1LQ6DCA0 310 aa9.15□□□□□ -0.94
LIMD1-203ENST00000465039 TMEM18Q96B42 140 aa9.15□□□□□ -0.94
LIMD1-203ENST00000465039 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
LIMD1-203ENST00000465039 BIRC6Q9NR09 4857 aa9.15□□□□□ -0.95
LIMD1-203ENST00000465039 A0A087WTM6 91 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 FGF6P10767 208 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 ENHOQ6UWT2 76 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 C20orf203Q8NBC4 194 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 MAP1LC3AQ9H492 121 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 PKHD1P08F94 4074 aa9.14□□□□□ -0.95
LIMD1-203ENST00000465039 PKD1P98161 4303 aa9.13□□□□□ -0.95
LIMD1-203ENST00000465039 LRCOL1A6NCL2 159 aa9.13□□□□□ -0.95
LIMD1-203ENST00000465039 REG3AQ06141 175 aa9.13□□□□□ -0.95
LIMD1-203ENST00000465039 LINC00269Q8N2A0 174 aa9.13□□□□□ -0.95
LIMD1-203ENST00000465039 NTN5Q8WTR8 489 aaPredicted RBP9.13□□□□□ -0.95
LIMD1-203ENST00000465039 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
LIMD1-203ENST00000465039 IGKV2D-24A0A075B6R9 120 aa9.12□□□□□ -0.95
LIMD1-203ENST00000465039 OR5A1Q8NGJ0 315 aa9.12□□□□□ -0.95
LIMD1-203ENST00000465039 NXT2Q9NPJ8 142 aaKnown RBP9.12□□□□□ -0.95
LIMD1-203ENST00000465039 PGPEP1Q9NXJ5 209 aa9.12□□□□□ -0.95
LIMD1-203ENST00000465039 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
LIMD1-203ENST00000465039 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.11□□□□□ -0.95
LIMD1-203ENST00000465039 IGKV2-29A2NJV5 120 aaPredicted RBP9.11□□□□□ -0.95
LIMD1-203ENST00000465039 RAB5AP20339 215 aa9.11□□□□□ -0.95
LIMD1-203ENST00000465039 DNAH11Q96DT5 4516 aa9.11□□□□□ -0.95
LIMD1-203ENST00000465039 CCL25O15444 150 aa9.1□□□□□ -0.95
LIMD1-203ENST00000465039 G0S2P27469 103 aa9.1□□□□□ -0.95
LIMD1-203ENST00000465039 C14orf177Q52M58 125 aa9.1□□□□□ -0.95
LIMD1-203ENST00000465039 RNASEKQ6P5S7 137 aaKnown RBP9.1□□□□□ -0.95
LIMD1-203ENST00000465039 Q8N8P6 123 aa9.1□□□□□ -0.95
LIMD1-203ENST00000465039 SPANXA1Q9NS26 97 aa9.1□□□□□ -0.95
LIMD1-203ENST00000465039 NPSP0C0P6 89 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms