RNA–Protein interactions for RNA: ENST00000464025.5

LMO2-204, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,550 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-204ENST00000464025 CHCHD7Q9BUK0 85 aa12.59□□□□□ -0.39
LMO2-204ENST00000464025 VCX2Q9H322 139 aa12.59□□□□□ -0.39
LMO2-204ENST00000464025 TRAV4A0A0B4J268 109 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 TRBV10-1A0A0K0K1A3 114 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 CIDEAO60543 219 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 CSNK1G2-AS1Q8NCQ2 148 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 OR4C5Q8NGB2 326 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 FAM104AQ969W3 186 aa12.58□□□□□ -0.4
LMO2-204ENST00000464025 C16orf74Q96GX8 76 aa12.57□□□□□ -0.4
LMO2-204ENST00000464025 OPRPNQ99935 248 aaPredicted RBP12.57□□□□□ -0.4
LMO2-204ENST00000464025 IGHV3OR16-12A0A075B7B8 117 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 PHLDA1Q8WV24 401 aaPredicted RBP12.56□□□□□ -0.4
LMO2-204ENST00000464025 Q9UF83 564 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 TRGV1A0A0A0MS02 117 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 TMEM223A0PJW6 202 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 COTL1Q14019 142 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 TMEM170BQ5T4T1 132 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 HIST1H4GQ99525 98 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 OVOL2Q9BRP0 275 aa12.56□□□□□ -0.4
LMO2-204ENST00000464025 A0A1B0GWB2 263 aa12.55□□□□□ -0.4
LMO2-204ENST00000464025 FOSL1P15407 271 aa12.55□□□□□ -0.4
LMO2-204ENST00000464025 EMP1P54849 157 aa12.55□□□□□ -0.4
LMO2-204ENST00000464025 MRPS36P82909 103 aaKnown RBP12.55□□□□□ -0.4
LMO2-204ENST00000464025 TIMM21Q9BVV7 248 aa12.55□□□□□ -0.4
LMO2-204ENST00000464025 UBE2D4Q9Y2X8 147 aa12.55□□□□□ -0.4
LMO2-204ENST00000464025 PLAC8L1A1L4L8 177 aa12.54□□□□□ -0.4
LMO2-204ENST00000464025 LEPROTO15243 131 aa12.54□□□□□ -0.4
LMO2-204ENST00000464025 PF4P02776 101 aa12.54□□□□□ -0.4
LMO2-204ENST00000464025 ZNF22P17026 224 aaPredicted RBP12.54□□□□□ -0.4
LMO2-204ENST00000464025 K7EP13 123 aa12.53□□□□□ -0.4
LMO2-204ENST00000464025 INSL3P51460 131 aa12.53□□□□□ -0.4
LMO2-204ENST00000464025 Q6ZTI0 123 aa12.53□□□□□ -0.4
LMO2-204ENST00000464025 ZNF479Q96JC4 524 aa12.53□□□□□ -0.4
LMO2-204ENST00000464025 H3BUT2 72 aa12.52□□□□□ -0.4
LMO2-204ENST00000464025 GTF2H5Q6ZYL4 71 aa12.52□□□□□ -0.4
LMO2-204ENST00000464025 OR5A1Q8NGJ0 315 aa12.52□□□□□ -0.4
LMO2-204ENST00000464025 WFDC10AQ9H1F0 79 aa12.52□□□□□ -0.4
LMO2-204ENST00000464025 SPANXB1Q9NS25 103 aaPredicted RBP12.52□□□□□ -0.4
LMO2-204ENST00000464025 A0A1W2PPM0 123 aa12.52□□□□□ -0.41
LMO2-204ENST00000464025 J3QQQ9 107 aa12.52□□□□□ -0.41
LMO2-204ENST00000464025 K7EQD1 137 aa12.52□□□□□ -0.41
LMO2-204ENST00000464025 RPL35AP18077 110 aaKnown RBP12.52□□□□□ -0.41
LMO2-204ENST00000464025 DAZ4Q86SG3 579 aaKnown RBP12.52□□□□□ -0.41
LMO2-204ENST00000464025 DAZ3Q9NR90 486 aaKnown RBP12.52□□□□□ -0.41
LMO2-204ENST00000464025 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 A0A0J9YY99 117 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 GAGE10A6NGK3 116 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 INAFM1C9JVW0 142 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 RPL36AP83881 106 aaKnown RBP12.51□□□□□ -0.41
LMO2-204ENST00000464025 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 SCGB1D4Q6XE38 83 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 RPL36ALQ969Q0 106 aaKnown RBP12.51□□□□□ -0.41
LMO2-204ENST00000464025 RAB37Q96AX2 223 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 PLEKHB2Q96CS7 222 aa12.51□□□□□ -0.41
LMO2-204ENST00000464025 NOP10Q9NPE3 64 aaKnown RBP12.51□□□□□ -0.41
LMO2-204ENST00000464025 NHP2Q9NX24 153 aaKnown RBP12.51□□□□□ -0.41
LMO2-204ENST00000464025 TINCRA0A1B0GVN0 87 aa12.5□□□□□ -0.41
LMO2-204ENST00000464025 K7EP34 96 aa12.5□□□□□ -0.41
LMO2-204ENST00000464025 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
LMO2-204ENST00000464025 RRN3P1Q2M238 152 aa12.5□□□□□ -0.41
LMO2-204ENST00000464025 SETD2Q9BYW2 2564 aaPredicted RBP12.5□□□□□ -0.41
LMO2-204ENST00000464025 LGALS3P17931 250 aaKnown RBP12.49□□□□□ -0.41
LMO2-204ENST00000464025 SAMD5Q5TGI4 173 aa12.49□□□□□ -0.41
LMO2-204ENST00000464025 SLC25A29Q8N8R3 303 aa12.49□□□□□ -0.41
LMO2-204ENST00000464025 TMEM238LA0A1B0GVL6 79 aa12.48□□□□□ -0.41
LMO2-204ENST00000464025 A6NJY4 79 aa12.48□□□□□ -0.41
LMO2-204ENST00000464025 UBE2D3P61077 147 aa12.48□□□□□ -0.41
LMO2-204ENST00000464025 UBE2D2P62837 147 aa12.48□□□□□ -0.41
LMO2-204ENST00000464025 CSDC2Q9Y534 153 aaKnown RBP12.48□□□□□ -0.41
LMO2-204ENST00000464025 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
LMO2-204ENST00000464025 SETXQ7Z333 2677 aaKnown RBP12.47□□□□□ -0.41
LMO2-204ENST00000464025 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
LMO2-204ENST00000464025 IGHV3-38A0A0C4DH36 116 aa12.47□□□□□ -0.41
LMO2-204ENST00000464025 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
LMO2-204ENST00000464025 FABP2P12104 132 aa12.47□□□□□ -0.41
LMO2-204ENST00000464025 C9orf66Q5T8R8 295 aa12.47□□□□□ -0.41
LMO2-204ENST00000464025 CEMP1Q6PRD7 247 aaPredicted RBP12.47□□□□□ -0.41
LMO2-204ENST00000464025 GCN1Q92616 2671 aaKnown RBP12.46□□□□□ -0.41
LMO2-204ENST00000464025 IGLL5B9A064 214 aa12.46□□□□□ -0.42
LMO2-204ENST00000464025 K7ERJ3 54 aa12.46□□□□□ -0.42
LMO2-204ENST00000464025 TIRAPP58753 221 aa12.46□□□□□ -0.42
LMO2-204ENST00000464025 SMAGPQ0VAQ4 97 aa12.46□□□□□ -0.42
LMO2-204ENST00000464025 GTSF1LQ9H1H1 148 aa12.46□□□□□ -0.42
LMO2-204ENST00000464025 CRLF1O75462 422 aa12.45□□□□□ -0.42
LMO2-204ENST00000464025 UBE2D1P51668 147 aa12.45□□□□□ -0.42
LMO2-204ENST00000464025 SRSF9Q13242 221 aaKnown RBP eCLIP12.45□□□□□ -0.42
LMO2-204ENST00000464025 FAM19A3Q7Z5A8 133 aa12.45□□□□□ -0.42
LMO2-204ENST00000464025 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
LMO2-204ENST00000464025 Q6ZUT4 128 aa12.44□□□□□ -0.42
LMO2-204ENST00000464025 SPCS1Q9Y6A9 102 aa12.44□□□□□ -0.42
LMO2-204ENST00000464025 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 IGHV1-58A0A0C4DH39 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 GAGE12BA1L429 117 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 KIR2DL5BQ8NHK3 375 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 HECTD1Q9ULT8 2610 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 TRGV2A0A075B6R0 118 aa12.43□□□□□ -0.42
LMO2-204ENST00000464025 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 259.8 ms