RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
COL9A3-203ENST00000462700 NTN5Q8WTR8 489 aaPredicted RBP12.48□□□□□ -0.41
COL9A3-203ENST00000462700 CLLU1Q5K131 121 aa12.47□□□□□ -0.41
COL9A3-203ENST00000462700 RNF185Q96GF1 192 aa12.47□□□□□ -0.41
COL9A3-203ENST00000462700 IGLV5-52A0A0A0MRZ9 124 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 LECT2O14960 151 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 RAB4AP20338 218 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 AMTP48728 403 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 AMN1Q8IY45 258 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 BAALCQ8WXS3 180 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 C1orf43Q9BWL3 253 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 PRR34Q9NV39 138 aa12.46□□□□□ -0.41
COL9A3-203ENST00000462700 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
COL9A3-203ENST00000462700 SDHAF1A6NFY7 115 aa12.45□□□□□ -0.42
COL9A3-203ENST00000462700 GAS8-AS1O95177 125 aa12.45□□□□□ -0.42
COL9A3-203ENST00000462700 GCSHP23434 173 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 IFITM2Q01629 132 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 MIAQ16674 131 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 CLPSL2Q6UWE3 100 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 LINC00269Q8N2A0 174 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
COL9A3-203ENST00000462700 A0A1B0GUV1 79 aa12.43□□□□□ -0.42
COL9A3-203ENST00000462700 UBE2L6O14933 153 aa12.43□□□□□ -0.42
COL9A3-203ENST00000462700 NCR2O95944 276 aa12.43□□□□□ -0.42
COL9A3-203ENST00000462700 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
COL9A3-203ENST00000462700 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
COL9A3-203ENST00000462700 RPS10P46783 165 aaKnown RBP12.42□□□□□ -0.42
COL9A3-203ENST00000462700 ST20Q9HBF5 79 aa12.42□□□□□ -0.42
COL9A3-203ENST00000462700 A0A1B0GW15 77 aa12.41□□□□□ -0.42
COL9A3-203ENST00000462700 I3L3M4 83 aa12.41□□□□□ -0.42
COL9A3-203ENST00000462700 APCSP02743 223 aa12.41□□□□□ -0.42
COL9A3-203ENST00000462700 REG3AQ06141 175 aa12.41□□□□□ -0.42
COL9A3-203ENST00000462700 PNRC1Q12796 327 aaPredicted RBP12.41□□□□□ -0.42
COL9A3-203ENST00000462700 TMEM70Q9BUB7 260 aa12.41□□□□□ -0.42
COL9A3-203ENST00000462700 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
COL9A3-203ENST00000462700 PMCHP20382 165 aa12.4□□□□□ -0.42
COL9A3-203ENST00000462700 CAMPP49913 170 aa12.4□□□□□ -0.42
COL9A3-203ENST00000462700 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.39□□□□□ -0.43
COL9A3-203ENST00000462700 PPP1R2P9O14990 202 aa12.39□□□□□ -0.43
COL9A3-203ENST00000462700 FAM104BQ5XKR9 115 aa12.39□□□□□ -0.43
COL9A3-203ENST00000462700 KRTAP17-1Q9BYP8 105 aa12.39□□□□□ -0.43
COL9A3-203ENST00000462700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.38□□□□□ -0.43
COL9A3-203ENST00000462700 IGKV2-29A2NJV5 120 aaPredicted RBP12.38□□□□□ -0.43
COL9A3-203ENST00000462700 HLA-DQA1P01909 254 aa12.38□□□□□ -0.43
COL9A3-203ENST00000462700 POLR2KP53803 58 aaKnown RBP12.38□□□□□ -0.43
COL9A3-203ENST00000462700 MRPL51Q4U2R6 128 aaKnown RBP12.38□□□□□ -0.43
COL9A3-203ENST00000462700 MRPL54Q6P161 138 aaKnown RBP12.38□□□□□ -0.43
COL9A3-203ENST00000462700 KRTAP26-1Q6PEX3 210 aa12.38□□□□□ -0.43
COL9A3-203ENST00000462700 TRBV27A0A0K0K1C4 114 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 A0A1B0GXF2 115 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 H7C423 109 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 TSHBP01222 138 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 HBBP68871 147 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 NRACQ8N912 160 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 TMEM242Q9NWH2 141 aa12.37□□□□□ -0.43
COL9A3-203ENST00000462700 PPP1R17O96001 155 aa12.36□□□□□ -0.43
COL9A3-203ENST00000462700 S100A8P05109 93 aa12.36□□□□□ -0.43
COL9A3-203ENST00000462700 XGP55808 180 aa12.36□□□□□ -0.43
COL9A3-203ENST00000462700 AMMECR1LQ6DCA0 310 aa12.36□□□□□ -0.43
COL9A3-203ENST00000462700 PCLOQ9Y6V0 5065 aa12.36□□□□□ -0.43
COL9A3-203ENST00000462700 IGLV10-54A0A075B6I4 117 aa12.35□□□□□ -0.43
COL9A3-203ENST00000462700 TRAV8-4A0A0B4J246 113 aa12.35□□□□□ -0.43
COL9A3-203ENST00000462700 ESDP10768 282 aa12.35□□□□□ -0.43
COL9A3-203ENST00000462700 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
COL9A3-203ENST00000462700 UQCC3Q6UW78 93 aa12.35□□□□□ -0.43
COL9A3-203ENST00000462700 ANAPC16Q96DE5 110 aa12.35□□□□□ -0.43
COL9A3-203ENST00000462700 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
COL9A3-203ENST00000462700 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
COL9A3-203ENST00000462700 F8W036 122 aa12.34□□□□□ -0.43
COL9A3-203ENST00000462700 MT-ND4LP03901 98 aa12.34□□□□□ -0.43
COL9A3-203ENST00000462700 FGF6P10767 208 aa12.34□□□□□ -0.43
COL9A3-203ENST00000462700 SUMO2P61956 95 aaKnown RBP12.34□□□□□ -0.43
COL9A3-203ENST00000462700 RNASEKQ6P5S7 137 aaKnown RBP12.34□□□□□ -0.43
COL9A3-203ENST00000462700 ATP5L2Q7Z4Y8 100 aa12.34□□□□□ -0.43
COL9A3-203ENST00000462700 VCYO14598 125 aa12.33□□□□□ -0.44
COL9A3-203ENST00000462700 Q8N1X5 172 aa12.33□□□□□ -0.44
COL9A3-203ENST00000462700 KRTAP4-5Q9BYR2 181 aa12.33□□□□□ -0.44
COL9A3-203ENST00000462700 DNAH8Q96JB1 4490 aa12.33□□□□□ -0.44
COL9A3-203ENST00000462700 ZNF25P17030 456 aaPredicted RBP12.32□□□□□ -0.44
COL9A3-203ENST00000462700 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
COL9A3-203ENST00000462700 CKS2P33552 79 aa12.32□□□□□ -0.44
COL9A3-203ENST00000462700 ABCA13Q86UQ4 5058 aa12.31□□□□□ -0.44
COL9A3-203ENST00000462700 TMEM218A2RU14 115 aa12.31□□□□□ -0.44
COL9A3-203ENST00000462700 TRBV24-1A0A075B6N3 115 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 C7orf77A4D0Y5 90 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 D6R8Y8 96 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 FCER1GP30273 86 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 BTF3L4Q96K17 158 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 KIR2DL4Q99706 377 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
COL9A3-203ENST00000462700 IGKV3OR2-268A0A0C4DH90 116 aa12.29□□□□□ -0.44
COL9A3-203ENST00000462700 TNFRSF6BO95407 300 aa12.29□□□□□ -0.44
COL9A3-203ENST00000462700 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
COL9A3-203ENST00000462700 MRPL52Q86TS9 123 aaKnown RBP12.29□□□□□ -0.44
COL9A3-203ENST00000462700 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
COL9A3-203ENST00000462700 FAM30AQ9NZY2 134 aa12.29□□□□□ -0.44
COL9A3-203ENST00000462700 PRSS1P07477 247 aa12.28□□□□□ -0.44
COL9A3-203ENST00000462700 RPL32P62910 135 aaKnown RBP12.28□□□□□ -0.44
COL9A3-203ENST00000462700 HAMPP81172 84 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms