RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GNG5P63218 68 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 LINC00336Q6ZUF6 198 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 GOLT1AQ6ZVE7 132 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 GATD1Q8NB37 220 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 KLHL30-AS1Q8NEE0 82 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 RNF5Q99942 180 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 OVOL2Q9BRP0 275 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 TMEM147Q9BVK8 224 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 SLC25A2Q9BXI2 301 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 C21orf62Q9NYP8 219 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 V9GYV3 84 aa3.56□□□□□ -1.84
ATPAF1-203ENST00000460928 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 IGHV3-35A0A0C4DH35 117 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 A8MWV9 139 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 H3BTX0 84 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 K7EN84 100 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 MPDU1O75352 247 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 PRB2P02812 416 aaPredicted RBP3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 IAPPP10997 89 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 PSMB8P28062 276 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 HLA-DMBP28068 263 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 CSN1S1P47710 185 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 Q6ZRP5 223 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 FAM231DQ6ZW35 169 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 CEND1Q8N111 149 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 C10orf126Q8N4M7 172 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 ZNF491Q8N8L2 437 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 C15orf53Q8NAA6 179 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 NDUFA4L2Q9NRX3 87 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 TMEM14BQ9NUH8 114 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 MRPL36Q9P0J6 103 aaKnown RBP3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
ATPAF1-203ENST00000460928 IGLV11-55A0A075B6I3 123 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 H3BP45 60 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 SSSCA1O60232 199 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 RNASE2P10153 161 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 NPPCP23582 126 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 RPL13AP40429 203 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 INSL3P51460 131 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 CRIP2P52943 208 aaPredicted RBP3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 C1orf195Q5TG92 126 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 C1orf158Q8N1D5 194 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 RPP25LQ8N5L8 163 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 ANKRD29Q8N6D5 301 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 ZNF414Q96IQ9 312 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 C9orf85Q96MD7 179 aa3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 NAA38Q9BRA0 125 aaKnown RBP3.54□□□□□ -1.84
ATPAF1-203ENST00000460928 IGHV3-49A0A0A0MS15 119 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 LOC107984640A0A0U1RRK4 108 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 K7EIM0 57 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 K7EQD1 137 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 CST7O76096 145 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 NDUFC2O95298 119 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 ACYP1P07311 99 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 P0DMU3 169 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 FAM231AP0DMU4 169 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 FAM231CP0DMU5 169 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 DEFA4P12838 97 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 COX7CP15954 63 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 CXCL5P42830 114 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 PRCDQ00LT1 54 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 C15orf32Q32M92 178 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 ZNF876PQ49A33 203 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 Q5XG85 94 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 CLEC19AQ6UXS0 136 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 COPS9Q8WXC6 57 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 CARD19Q96LW7 228 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 CHAC1Q9BUX1 264 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 SLC25A39Q9BZJ4 359 aaPredicted RBP3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 JPT2Q9H910 190 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 EDA2RQ9HAV5 297 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 LAMTOR3Q9UHA4 124 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 COL7A1Q02388 2944 aa3.53□□□□□ -1.84
ATPAF1-203ENST00000460928 IGHV3OR16-13A0A075B7E8 117 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 IGHV3-74A0A0B4J1X5 117 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 TRAV4A0A0B4J268 109 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 A8MWL6 223 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 I3L2K1 104 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 ATOX1O00244 68 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 NXPH4O95158 308 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 TRACP01848 142 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 LGALS1P09382 135 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 FXYD2P54710 66 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 UBE2D3P61077 147 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 UBE2D2P62837 147 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 SLC38A11Q08AI6 406 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 C12orf74Q32Q52 190 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 TMEM14EPQ6UXP3 125 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 NDUFA11Q86Y39 141 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 DPH3Q96FX2 82 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 ZC2HC1AQ96GY0 325 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 VSIRQ9H7M9 311 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 Q9HAA7 133 aa3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 F11RQ9Y624 299 aaKnown RBP3.52□□□□□ -1.85
ATPAF1-203ENST00000460928 AGRNO00468 2067 aa3.51□□□□□ -1.85
ATPAF1-203ENST00000460928 TRBV20OR9-2A0A075B6H5 130 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms