RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 FAM74A3Q4VXF1 159 aa13.66□□□□□ -0.22
SRM-202ENST00000459997 C14orf177Q52M58 125 aa13.66□□□□□ -0.22
SRM-202ENST00000459997 CT83Q5H943 113 aa13.66□□□□□ -0.22
SRM-202ENST00000459997 ISOC2Q96AB3 205 aa13.66□□□□□ -0.22
SRM-202ENST00000459997 OSTCQ9NRP0 149 aa13.66□□□□□ -0.22
SRM-202ENST00000459997 FOXA3P55318 350 aaPredicted RBP13.65□□□□□ -0.22
SRM-202ENST00000459997 LINC00269Q8N2A0 174 aa13.65□□□□□ -0.22
SRM-202ENST00000459997 PRR34Q9NV39 138 aa13.65□□□□□ -0.22
SRM-202ENST00000459997 ADIRFQ15847 76 aa13.64□□□□□ -0.23
SRM-202ENST00000459997 SMDT1Q9H4I9 107 aa13.64□□□□□ -0.23
SRM-202ENST00000459997 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
SRM-202ENST00000459997 NAT8Q9UHE5 227 aa13.64□□□□□ -0.23
SRM-202ENST00000459997 V9GYV3 84 aa13.64□□□□□ -0.23
SRM-202ENST00000459997 USP17L23D6RBM5 183 aa13.63□□□□□ -0.23
SRM-202ENST00000459997 TSKUQ8WUA8 353 aa13.63□□□□□ -0.23
SRM-202ENST00000459997 SCXQ7RTU7 201 aa13.62□□□□□ -0.23
SRM-202ENST00000459997 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
SRM-202ENST00000459997 TMEM243Q9BU79 118 aa13.62□□□□□ -0.23
SRM-202ENST00000459997 TRAV26-2A0A0B4J265 109 aa13.61□□□□□ -0.23
SRM-202ENST00000459997 HIGD1CA8MV81 97 aa13.61□□□□□ -0.23
SRM-202ENST00000459997 DEFB104AQ8WTQ1 72 aa13.61□□□□□ -0.23
SRM-202ENST00000459997 RAB14P61106 215 aa13.6□□□□□ -0.23
SRM-202ENST00000459997 IFITM2Q01629 132 aa13.6□□□□□ -0.23
SRM-202ENST00000459997 REG3AQ06141 175 aa13.6□□□□□ -0.23
SRM-202ENST00000459997 GATD1Q8NB37 220 aa13.6□□□□□ -0.23
SRM-202ENST00000459997 GFRA4Q9GZZ7 299 aa13.6□□□□□ -0.23
SRM-202ENST00000459997 PLA2G1BP04054 148 aaKnown RBP13.59□□□□□ -0.23
SRM-202ENST00000459997 C20orf203Q8NBC4 194 aa13.59□□□□□ -0.23
SRM-202ENST00000459997 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
SRM-202ENST00000459997 IGLV10-54A0A075B6I4 117 aa13.58□□□□□ -0.24
SRM-202ENST00000459997 COTL1Q14019 142 aa13.58□□□□□ -0.24
SRM-202ENST00000459997 KRTAP26-1Q6PEX3 210 aa13.58□□□□□ -0.24
SRM-202ENST00000459997 DMBT1Q9UGM3 2413 aaPredicted RBP13.58□□□□□ -0.24
SRM-202ENST00000459997 IGLV4-60A0A075B6I1 120 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 A0A1B0GUT8 65 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 A0A1B0GUV1 79 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 FAM231BA6NCW3 169 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 UBE2L6O14933 153 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 PRSS1P07477 247 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 AMTP48728 403 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 SMIM15Q7Z3B0 74 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 BORCS7Q96B45 105 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 MYCBP2O75592 4640 aa13.57□□□□□ -0.24
SRM-202ENST00000459997 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
SRM-202ENST00000459997 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
SRM-202ENST00000459997 RPL39LQ96EH5 51 aaKnown RBP13.56□□□□□ -0.24
SRM-202ENST00000459997 CIRBP-AS1Q8TBR5 109 aa13.55□□□□□ -0.24
SRM-202ENST00000459997 FLG2Q5D862 2391 aaPredicted RBP13.55□□□□□ -0.24
SRM-202ENST00000459997 HERC1Q15751 4861 aa13.54□□□□□ -0.24
SRM-202ENST00000459997 TRAV8-4A0A0B4J246 113 aa13.53□□□□□ -0.24
SRM-202ENST00000459997 GAS8-AS1O95177 125 aa13.53□□□□□ -0.24
SRM-202ENST00000459997 DGAT2L7PQ6IED9 249 aa13.53□□□□□ -0.24
SRM-202ENST00000459997 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.25
SRM-202ENST00000459997 RNF185Q96GF1 192 aa13.52□□□□□ -0.25
SRM-202ENST00000459997 TMEM191AQ9H0A3 160 aa13.52□□□□□ -0.25
SRM-202ENST00000459997 NAT8BQ9UHF3 227 aa13.52□□□□□ -0.25
SRM-202ENST00000459997 RIGQ13278 110 aa13.51□□□□□ -0.25
SRM-202ENST00000459997 AMN1Q8IY45 258 aa13.5□□□□□ -0.25
SRM-202ENST00000459997 C9orf163Q8N9P6 203 aa13.5□□□□□ -0.25
SRM-202ENST00000459997 CLRN3Q8NCR9 226 aa13.5□□□□□ -0.25
SRM-202ENST00000459997 RAB4AP20338 218 aa13.49□□□□□ -0.25
SRM-202ENST00000459997 hDV102S1A0JD36 115 aa13.48□□□□□ -0.25
SRM-202ENST00000459997 SDHAF1A6NFY7 115 aa13.48□□□□□ -0.25
SRM-202ENST00000459997 NCR2O95944 276 aa13.48□□□□□ -0.25
SRM-202ENST00000459997 AMMECR1LQ6DCA0 310 aa13.48□□□□□ -0.25
SRM-202ENST00000459997 APCSP02743 223 aa13.47□□□□□ -0.25
SRM-202ENST00000459997 RPS10P46783 165 aaKnown RBP13.47□□□□□ -0.25
SRM-202ENST00000459997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.46□□□□□ -0.25
SRM-202ENST00000459997 IGKV3OR2-268A0A0C4DH90 116 aa13.46□□□□□ -0.25
SRM-202ENST00000459997 IGKV2-29A2NJV5 120 aaPredicted RBP13.46□□□□□ -0.25
SRM-202ENST00000459997 SMKR1H3BMG3 65 aa13.46□□□□□ -0.25
SRM-202ENST00000459997 CAMPP49913 170 aa13.45□□□□□ -0.26
SRM-202ENST00000459997 CNBPP62633 177 aaKnown RBP13.45□□□□□ -0.26
SRM-202ENST00000459997 RNASEKQ6P5S7 137 aaKnown RBP13.45□□□□□ -0.26
SRM-202ENST00000459997 TRBV6-5A0A0K0K1A5 114 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 H7C423 109 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 I3L3M4 83 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 J3QL48 77 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 PMCHP20382 165 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 KRTAP10-4P60372 401 aaPredicted RBP13.44□□□□□ -0.26
SRM-202ENST00000459997 MRPL54Q6P161 138 aaKnown RBP13.44□□□□□ -0.26
SRM-202ENST00000459997 MRAP2Q96G30 205 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 AP5S1Q9NUS5 200 aa13.44□□□□□ -0.26
SRM-202ENST00000459997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.44□□□□□ -0.26
SRM-202ENST00000459997 GAGE12HA6NDE8 117 aa13.43□□□□□ -0.26
SRM-202ENST00000459997 FGF6P10767 208 aa13.43□□□□□ -0.26
SRM-202ENST00000459997 SDIM1Q6ZPB5 146 aa13.43□□□□□ -0.26
SRM-202ENST00000459997 ADCYAP1P18509 176 aa13.42□□□□□ -0.26
SRM-202ENST00000459997 PNRC1Q12796 327 aaPredicted RBP13.42□□□□□ -0.26
SRM-202ENST00000459997 MRPL51Q4U2R6 128 aaKnown RBP13.42□□□□□ -0.26
SRM-202ENST00000459997 FAM104BQ5XKR9 115 aa13.42□□□□□ -0.26
SRM-202ENST00000459997 ST20Q9HBF5 79 aa13.42□□□□□ -0.26
SRM-202ENST00000459997 A0A1B0GXF2 115 aa13.41□□□□□ -0.26
SRM-202ENST00000459997 PANO1I0J062 215 aa13.41□□□□□ -0.26
SRM-202ENST00000459997 PPP1R2P9O14990 202 aa13.41□□□□□ -0.26
SRM-202ENST00000459997 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.4□□□□□ -0.26
SRM-202ENST00000459997 A0A1B0GW15 77 aa13.4□□□□□ -0.26
SRM-202ENST00000459997 UQCC3Q6UW78 93 aa13.4□□□□□ -0.26
SRM-202ENST00000459997 C15orf56Q8N910 161 aa13.4□□□□□ -0.26
SRM-202ENST00000459997 NRACQ8N912 160 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms