RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
TIMP1-205ENST00000456754 Q8N976 141 aa9.49□□□□□ -0.89
TIMP1-205ENST00000456754 CHCHD7Q9BUK0 85 aa9.49□□□□□ -0.89
TIMP1-205ENST00000456754 TRBV24-1A0A075B6N3 115 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 TRBV25-1A0A075B6N4 114 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 TRBV27A0A0K0K1C4 114 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 LOC389332A0A1B0GUA5 103 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 TMEM262E9PQX1 116 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 APCSP02743 223 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 AMTP48728 403 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.48□□□□□ -0.89
TIMP1-205ENST00000456754 GNB1LQ9BYB4 327 aa9.48□□□□□ -0.89
TIMP1-205ENST00000456754 MRPL18Q9H0U6 180 aaKnown RBP9.48□□□□□ -0.89
TIMP1-205ENST00000456754 HLA-DQA1P01909 254 aa9.47□□□□□ -0.89
TIMP1-205ENST00000456754 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
TIMP1-205ENST00000456754 VCYO14598 125 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 TCAPO15273 167 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 PPBPP02775 128 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 TTC32Q5I0X7 151 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 C20orf78Q9BR46 151 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 SMIM2Q9BVW6 85 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 Q9HAA7 133 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 SMCO4Q9NRQ5 59 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 KLK12Q9UKR0 248 aa9.46□□□□□ -0.9
TIMP1-205ENST00000456754 DNAH17Q9UFH2 4485 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 IGLV4-60A0A075B6I1 120 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 RBX1P62877 108 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 C1orf134Q5TEV5 83 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 CLPSL2Q6UWE3 100 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 C6orf223Q8N319 242 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 FAT2Q9NYQ8 4349 aa9.45□□□□□ -0.9
TIMP1-205ENST00000456754 A0A087WX48 190 aa9.44□□□□□ -0.9
TIMP1-205ENST00000456754 PPP1R17O96001 155 aa9.44□□□□□ -0.9
TIMP1-205ENST00000456754 ESDP10768 282 aa9.44□□□□□ -0.9
TIMP1-205ENST00000456754 Q6ZRN7 208 aaPredicted RBP9.44□□□□□ -0.9
TIMP1-205ENST00000456754 ALKBH7Q9BT30 221 aaPredicted RBP9.44□□□□□ -0.9
TIMP1-205ENST00000456754 TRAPPC1Q9Y5R8 145 aa9.44□□□□□ -0.9
TIMP1-205ENST00000456754 IBA57-AS1B1ANH7 110 aa9.43□□□□□ -0.9
TIMP1-205ENST00000456754 PHOX2AO14813 284 aa9.43□□□□□ -0.9
TIMP1-205ENST00000456754 ATP6V1G1O75348 118 aa9.43□□□□□ -0.9
TIMP1-205ENST00000456754 FCER1GP30273 86 aa9.43□□□□□ -0.9
TIMP1-205ENST00000456754 RPL32P62910 135 aaKnown RBP9.43□□□□□ -0.9
TIMP1-205ENST00000456754 C20orf203Q8NBC4 194 aa9.43□□□□□ -0.9
TIMP1-205ENST00000456754 TRAV9-2A0A087WT02 112 aa9.42□□□□□ -0.9
TIMP1-205ENST00000456754 UBE2L6O14933 153 aa9.42□□□□□ -0.9
TIMP1-205ENST00000456754 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
TIMP1-205ENST00000456754 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
TIMP1-205ENST00000456754 UBE2WQ96B02 151 aa9.42□□□□□ -0.9
TIMP1-205ENST00000456754 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
TIMP1-205ENST00000456754 COLCA2A8K830 154 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 MT-ND6P03923 174 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 FGF6P10767 208 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
TIMP1-205ENST00000456754 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
TIMP1-205ENST00000456754 TNP2Q05952 138 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 COX19Q49B96 90 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 KIR2DL4Q99706 377 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 LAMTOR2Q9Y2Q5 125 aa9.41□□□□□ -0.9
TIMP1-205ENST00000456754 RNASEKQ6P5S7 137 aaKnown RBP9.4□□□□□ -0.9
TIMP1-205ENST00000456754 LINC00269Q8N2A0 174 aa9.4□□□□□ -0.9
TIMP1-205ENST00000456754 C10orf126Q8N4M7 172 aa9.4□□□□□ -0.9
TIMP1-205ENST00000456754 Q8N8P6 123 aa9.4□□□□□ -0.9
TIMP1-205ENST00000456754 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
TIMP1-205ENST00000456754 A0A1B0GUV1 79 aa9.38□□□□□ -0.91
TIMP1-205ENST00000456754 PRSS29PA6NIE9 313 aa9.38□□□□□ -0.91
TIMP1-205ENST00000456754 RNASE13Q5GAN3 156 aaKnown RBP9.38□□□□□ -0.91
TIMP1-205ENST00000456754 AMMECR1LQ6DCA0 310 aa9.38□□□□□ -0.91
TIMP1-205ENST00000456754 MAPKAPK5-AS1Q8N8E1 139 aa9.38□□□□□ -0.91
TIMP1-205ENST00000456754 FAM104AQ969W3 186 aa9.38□□□□□ -0.91
TIMP1-205ENST00000456754 OPRPNQ99935 248 aaPredicted RBP9.38□□□□□ -0.91
TIMP1-205ENST00000456754 TRGC2P03986 189 aa9.37□□□□□ -0.91
TIMP1-205ENST00000456754 URB1-AS1Q96HZ7 61 aa9.37□□□□□ -0.91
TIMP1-205ENST00000456754 UBE2D4Q9Y2X8 147 aa9.37□□□□□ -0.91
TIMP1-205ENST00000456754 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 K7EP13 123 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 RAB5AP20339 215 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
TIMP1-205ENST00000456754 PKIAP61925 76 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 REG3AQ06141 175 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 WFDC2Q14508 124 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 LAGE3Q14657 143 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 C18orf32Q8TCD1 76 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 PRR34Q9NV39 138 aa9.36□□□□□ -0.91
TIMP1-205ENST00000456754 IGKV2D-24A0A075B6R9 120 aa9.35□□□□□ -0.91
TIMP1-205ENST00000456754 H7C423 109 aa9.35□□□□□ -0.91
TIMP1-205ENST00000456754 CRPP02741 224 aa9.35□□□□□ -0.91
TIMP1-205ENST00000456754 Q6ZUT4 128 aa9.35□□□□□ -0.91
TIMP1-205ENST00000456754 PRSS3P2Q8NHM4 247 aa9.35□□□□□ -0.91
TIMP1-205ENST00000456754 NXT2Q9NPJ8 142 aaKnown RBP9.35□□□□□ -0.91
TIMP1-205ENST00000456754 DNAH11Q96DT5 4516 aa9.35□□□□□ -0.91
TIMP1-205ENST00000456754 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
TIMP1-205ENST00000456754 A0A1B0GVY2 172 aa9.34□□□□□ -0.91
TIMP1-205ENST00000456754 LECT2O14960 151 aa9.34□□□□□ -0.91
TIMP1-205ENST00000456754 KRTAP26-1Q6PEX3 210 aa9.34□□□□□ -0.91
TIMP1-205ENST00000456754 MRPL52Q86TS9 123 aaKnown RBP9.34□□□□□ -0.91
TIMP1-205ENST00000456754 OR5A1Q8NGJ0 315 aa9.34□□□□□ -0.91
TIMP1-205ENST00000456754 CDC42SE2Q9NRR3 84 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms