RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 FAM19A2Q8N3H0 131 aa7.67□□□□□ -1.18
SCN9A-205ENST00000454569 PLA2G2DQ9UNK4 145 aa7.67□□□□□ -1.18
SCN9A-205ENST00000454569 TRAV26-1A0A087WT03 109 aa7.67□□□□□ -1.18
SCN9A-205ENST00000454569 K7EQD1 137 aa7.67□□□□□ -1.18
SCN9A-205ENST00000454569 PPP1R17O96001 155 aa7.67□□□□□ -1.18
SCN9A-205ENST00000454569 NXT2Q9NPJ8 142 aaKnown RBP7.67□□□□□ -1.18
SCN9A-205ENST00000454569 NIT2Q9NQR4 276 aa7.67□□□□□ -1.18
SCN9A-205ENST00000454569 PLECQ15149 4684 aaKnown RBP7.67□□□□□ -1.18
SCN9A-205ENST00000454569 IGLV2-18A0A075B6J9 118 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 IGHV1-24A0A0C4DH33 117 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 TEX48A0A1B0GUV7 120 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 TRBV6-4A0A1B0GX49 114 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 GAGE1Q13065 139 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 GAGE4Q13068 117 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 GAGE5Q13069 117 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 PMCHL1Q16048 86 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 GAGE13Q4V321 117 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 LBHQ53QV2 105 aaPredicted RBP7.66□□□□□ -1.18
SCN9A-205ENST00000454569 ZNRF2Q8NHG8 242 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 PRO0255Q9UI72 69 aa7.66□□□□□ -1.18
SCN9A-205ENST00000454569 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.18
SCN9A-205ENST00000454569 IGHV3-38A0A0C4DH36 116 aa7.65□□□□□ -1.18
SCN9A-205ENST00000454569 POLR2KP53803 58 aaKnown RBP7.65□□□□□ -1.18
SCN9A-205ENST00000454569 SUMO2P61956 95 aaKnown RBP7.65□□□□□ -1.18
SCN9A-205ENST00000454569 Q8N8P6 123 aa7.65□□□□□ -1.18
SCN9A-205ENST00000454569 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
SCN9A-205ENST00000454569 C20orf78Q9BR46 151 aa7.65□□□□□ -1.18
SCN9A-205ENST00000454569 TENM2Q9NT68 2774 aa7.65□□□□□ -1.19
SCN9A-205ENST00000454569 A0A096LPF7 62 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 TRBV6-5A0A0K0K1A5 114 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 H7C1H1 209 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 PAX4O43316 350 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 LINC00694P0DN24 101 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 GYPEP15421 78 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 TMEM70Q9BUB7 260 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 SMIM2Q9BVW6 85 aa7.64□□□□□ -1.19
SCN9A-205ENST00000454569 SDHAF1A6NFY7 115 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 RHOHQ15669 191 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 ST20Q9HBF5 79 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 LYSTQ99698 3801 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 TCAPO15273 167 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 LEPROTL1O95214 131 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 UBE2D3P61077 147 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 UBE2D2P62837 147 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 PYY3Q5JQD4 70 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 TNFRSF18Q9Y5U5 241 aa7.63□□□□□ -1.19
SCN9A-205ENST00000454569 TRBV7-3A0A075B6L6 115 aa7.62□□□□□ -1.19
SCN9A-205ENST00000454569 TRAV10A0A0B4J240 114 aa7.62□□□□□ -1.19
SCN9A-205ENST00000454569 TRBV10-1A0A0K0K1A3 114 aa7.62□□□□□ -1.19
SCN9A-205ENST00000454569 HBDP02042 147 aa7.62□□□□□ -1.19
SCN9A-205ENST00000454569 KRTDAPP60985 99 aa7.62□□□□□ -1.19
SCN9A-205ENST00000454569 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
SCN9A-205ENST00000454569 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
SCN9A-205ENST00000454569 TSHBP01222 138 aa7.61□□□□□ -1.19
SCN9A-205ENST00000454569 RPL36AP83881 106 aaKnown RBP7.61□□□□□ -1.19
SCN9A-205ENST00000454569 LAGE3Q14657 143 aa7.61□□□□□ -1.19
SCN9A-205ENST00000454569 JOSD1Q15040 202 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-205ENST00000454569 RPL36ALQ969Q0 106 aaKnown RBP7.61□□□□□ -1.19
SCN9A-205ENST00000454569 DNAJC30Q96LL9 226 aa7.61□□□□□ -1.19
SCN9A-205ENST00000454569 PRADC1Q9BSG0 188 aa7.61□□□□□ -1.19
SCN9A-205ENST00000454569 A0A096LNJ9 63 aa7.6□□□□□ -1.19
SCN9A-205ENST00000454569 K7EMI3 77 aa7.6□□□□□ -1.19
SCN9A-205ENST00000454569 RPL32P62910 135 aaKnown RBP7.6□□□□□ -1.19
SCN9A-205ENST00000454569 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
SCN9A-205ENST00000454569 SCGB1D1O95968 90 aa7.59□□□□□ -1.19
SCN9A-205ENST00000454569 C3orf79P0CE67 100 aa7.59□□□□□ -1.19
SCN9A-205ENST00000454569 FCER1GP30273 86 aa7.59□□□□□ -1.19
SCN9A-205ENST00000454569 ORMDL2Q53FV1 153 aa7.59□□□□□ -1.19
SCN9A-205ENST00000454569 IGLL5B9A064 214 aa7.59□□□□□ -1.2
SCN9A-205ENST00000454569 VCYO14598 125 aa7.59□□□□□ -1.2
SCN9A-205ENST00000454569 NUDT3O95989 172 aa7.59□□□□□ -1.2
SCN9A-205ENST00000454569 ATP6V0E2Q8NHE4 81 aa7.59□□□□□ -1.2
SCN9A-205ENST00000454569 KIR2DL4Q99706 377 aa7.59□□□□□ -1.2
SCN9A-205ENST00000454569 I3L3M4 83 aa7.58□□□□□ -1.2
SCN9A-205ENST00000454569 ZFAND6Q6FIF0 208 aa7.58□□□□□ -1.2
SCN9A-205ENST00000454569 LINC00173Q6ZV60 143 aa7.58□□□□□ -1.2
SCN9A-205ENST00000454569 CHCHD7Q9BUK0 85 aa7.58□□□□□ -1.2
SCN9A-205ENST00000454569 MAP1LC3CQ9BXW4 147 aa7.58□□□□□ -1.2
SCN9A-205ENST00000454569 ICOSQ9Y6W8 199 aa7.58□□□□□ -1.2
SCN9A-205ENST00000454569 CEMP1Q6PRD7 247 aaPredicted RBP7.57□□□□□ -1.2
SCN9A-205ENST00000454569 H0Y8G0 127 aa7.56□□□□□ -1.2
SCN9A-205ENST00000454569 H3BNG1 76 aa7.56□□□□□ -1.2
SCN9A-205ENST00000454569 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
SCN9A-205ENST00000454569 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
SCN9A-205ENST00000454569 MRPL23Q16540 153 aaKnown RBP7.56□□□□□ -1.2
SCN9A-205ENST00000454569 ESRGQ1W209 222 aa7.56□□□□□ -1.2
SCN9A-205ENST00000454569 LYPD5Q6UWN5 251 aa7.56□□□□□ -1.2
SCN9A-205ENST00000454569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-205ENST00000454569 A0A1B0GV90 55 aa7.55□□□□□ -1.2
SCN9A-205ENST00000454569 IGKV2-29A2NJV5 120 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-205ENST00000454569 G0S2P27469 103 aa7.55□□□□□ -1.2
SCN9A-205ENST00000454569 DAZ4Q86SG3 579 aaKnown RBP7.55□□□□□ -1.2
SCN9A-205ENST00000454569 IFI27L1Q96BM0 104 aa7.55□□□□□ -1.2
SCN9A-205ENST00000454569 GTSF1LQ9H1H1 148 aa7.55□□□□□ -1.2
SCN9A-205ENST00000454569 DAZ3Q9NR90 486 aaKnown RBP7.55□□□□□ -1.2
SCN9A-205ENST00000454569 APLNQ9ULZ1 77 aa7.55□□□□□ -1.2
SCN9A-205ENST00000454569 C20orf202A1L168 122 aa7.54□□□□□ -1.2
SCN9A-205ENST00000454569 ATP5LO75964 103 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms