RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 ZNF727A8MUV8 499 aa6.99□□□□□ -1.29
DDX39A-203ENST00000454233 USP17L23D6RBM5 183 aa6.99□□□□□ -1.29
DDX39A-203ENST00000454233 REG3AQ06141 175 aa6.99□□□□□ -1.29
DDX39A-203ENST00000454233 LINC01620Q4KN68 170 aa6.99□□□□□ -1.29
DDX39A-203ENST00000454233 TRAV8-4A0A0B4J246 113 aa6.98□□□□□ -1.29
DDX39A-203ENST00000454233 FOXA3P55318 350 aaPredicted RBP6.98□□□□□ -1.29
DDX39A-203ENST00000454233 LINC01551Q86U37 167 aa6.98□□□□□ -1.29
DDX39A-203ENST00000454233 C20orf203Q8NBC4 194 aa6.98□□□□□ -1.29
DDX39A-203ENST00000454233 DEFB104AQ8WTQ1 72 aa6.98□□□□□ -1.29
DDX39A-203ENST00000454233 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
DDX39A-203ENST00000454233 IGLV10-54A0A075B6I4 117 aa6.97□□□□□ -1.29
DDX39A-203ENST00000454233 NCR2O95944 276 aa6.97□□□□□ -1.29
DDX39A-203ENST00000454233 SRP19P09132 144 aaKnown RBP6.97□□□□□ -1.29
DDX39A-203ENST00000454233 TSKUQ8WUA8 353 aa6.97□□□□□ -1.29
DDX39A-203ENST00000454233 RPL39LQ96EH5 51 aaKnown RBP6.97□□□□□ -1.29
DDX39A-203ENST00000454233 GFRA4Q9GZZ7 299 aa6.97□□□□□ -1.29
DDX39A-203ENST00000454233 OSTCQ9NRP0 149 aa6.97□□□□□ -1.29
DDX39A-203ENST00000454233 A0A1B0GUT8 65 aa6.96□□□□□ -1.3
DDX39A-203ENST00000454233 FAM231BA6NCW3 169 aa6.96□□□□□ -1.3
DDX39A-203ENST00000454233 HIGD1CA8MV81 97 aa6.96□□□□□ -1.3
DDX39A-203ENST00000454233 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.3
DDX39A-203ENST00000454233 AMMECR1LQ6DCA0 310 aa6.96□□□□□ -1.3
DDX39A-203ENST00000454233 DGAT2L7PQ6IED9 249 aa6.96□□□□□ -1.3
DDX39A-203ENST00000454233 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
DDX39A-203ENST00000454233 SDHAF1A6NFY7 115 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 APCSP02743 223 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 PRSS1P07477 247 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 PMCHP20382 165 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 FAM74A3Q4VXF1 159 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 SCXQ7RTU7 201 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 LINC00528Q8N1L1 170 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 CHAC1Q9BUX1 264 aa6.95□□□□□ -1.3
DDX39A-203ENST00000454233 H7C423 109 aa6.94□□□□□ -1.3
DDX39A-203ENST00000454233 I3L3M4 83 aa6.94□□□□□ -1.3
DDX39A-203ENST00000454233 PEA15Q15121 130 aa6.94□□□□□ -1.3
DDX39A-203ENST00000454233 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
DDX39A-203ENST00000454233 TMEM191AQ9H0A3 160 aa6.94□□□□□ -1.3
DDX39A-203ENST00000454233 ST20Q9HBF5 79 aa6.94□□□□□ -1.3
DDX39A-203ENST00000454233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
DDX39A-203ENST00000454233 IGKV3OR2-268A0A0C4DH90 116 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 hDV102S1A0JD36 115 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
DDX39A-203ENST00000454233 RIGQ13278 110 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 ADIRFQ15847 76 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 C9orf163Q8N9P6 203 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 ISOC2Q96AB3 205 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 MRAP2Q96G30 205 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 AP5S1Q9NUS5 200 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 V9GYV3 84 aa6.93□□□□□ -1.3
DDX39A-203ENST00000454233 FGF6P10767 208 aa6.92□□□□□ -1.3
DDX39A-203ENST00000454233 RPL23P62829 140 aaKnown RBP6.92□□□□□ -1.3
DDX39A-203ENST00000454233 CIRBP-AS1Q8TBR5 109 aa6.92□□□□□ -1.3
DDX39A-203ENST00000454233 BTF3L4Q96K17 158 aa6.92□□□□□ -1.3
DDX39A-203ENST00000454233 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
DDX39A-203ENST00000454233 NAT8BQ9UHF3 227 aa6.92□□□□□ -1.3
DDX39A-203ENST00000454233 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.91□□□□□ -1.3
DDX39A-203ENST00000454233 GAGE12HA6NDE8 117 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 ZNF25P17030 456 aaPredicted RBP6.91□□□□□ -1.3
DDX39A-203ENST00000454233 RAB4AP20338 218 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 AMN1Q8IY45 258 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 NUP35Q8NFH5 326 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 TMEM101Q96IK0 257 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 SMDT1Q9H4I9 107 aa6.91□□□□□ -1.3
DDX39A-203ENST00000454233 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.3
DDX39A-203ENST00000454233 C9JQL5 133 aa6.9□□□□□ -1.3
DDX39A-203ENST00000454233 GAS8-AS1O95177 125 aa6.9□□□□□ -1.3
DDX39A-203ENST00000454233 PPP1R17O96001 155 aa6.9□□□□□ -1.3
DDX39A-203ENST00000454233 CNBPP62633 177 aaKnown RBP6.9□□□□□ -1.3
DDX39A-203ENST00000454233 TMEM242Q9NWH2 141 aa6.9□□□□□ -1.3
DDX39A-203ENST00000454233 FAT1Q14517 4588 aa6.9□□□□□ -1.31
DDX39A-203ENST00000454233 SRRM2Q9UQ35 2752 aaKnown RBP6.9□□□□□ -1.31
DDX39A-203ENST00000454233 TRBV27A0A0K0K1C4 114 aa6.89□□□□□ -1.31
DDX39A-203ENST00000454233 TSHBP01222 138 aa6.89□□□□□ -1.31
DDX39A-203ENST00000454233 ESDP10768 282 aa6.89□□□□□ -1.31
DDX39A-203ENST00000454233 RPS10P46783 165 aaKnown RBP6.89□□□□□ -1.31
DDX39A-203ENST00000454233 POLR2KP53803 58 aaKnown RBP6.89□□□□□ -1.31
DDX39A-203ENST00000454233 SRSF3P84103 164 aaKnown RBP6.89□□□□□ -1.31
DDX39A-203ENST00000454233 OR5A1Q8NGJ0 315 aa6.89□□□□□ -1.31
DDX39A-203ENST00000454233 CHCHD10Q8WYQ3 142 aaPredicted RBP6.89□□□□□ -1.31
DDX39A-203ENST00000454233 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
DDX39A-203ENST00000454233 IGHV3-64A0A075B6Q5 118 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 A0A1B0GW15 77 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 SMIM27A0A1W2PRY6 76 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 C7orf77A4D0Y5 90 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 SMKR1H3BMG3 65 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 VCYO14598 125 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 FCER1GP30273 86 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 SDIM1Q6ZPB5 146 aa6.88□□□□□ -1.31
DDX39A-203ENST00000454233 PPP1R2P9O14990 202 aa6.87□□□□□ -1.31
DDX39A-203ENST00000454233 S100A8P05109 93 aa6.87□□□□□ -1.31
DDX39A-203ENST00000454233 CAMPP49913 170 aa6.87□□□□□ -1.31
DDX39A-203ENST00000454233 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
DDX39A-203ENST00000454233 SMAGPQ0VAQ4 97 aa6.87□□□□□ -1.31
DDX39A-203ENST00000454233 FAM104BQ5XKR9 115 aa6.87□□□□□ -1.31
DDX39A-203ENST00000454233 MRPL52Q86TS9 123 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms