RNA–Protein interactions for RNA: ENST00000453022.6

DEPDC1B-202, Transcript of DEP domain containing 1B, humanhuman

TSL 2 BASIC

Gene DEPDC1B, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-202ENST00000453022 PLAC8Q9NZF1 115 aa5.57□□□□□ -1.52
DEPDC1B-202ENST00000453022 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
DEPDC1B-202ENST00000453022 H7C1H1 209 aa5.56□□□□□ -1.52
DEPDC1B-202ENST00000453022 KCNRGQ8N5I3 272 aa5.56□□□□□ -1.52
DEPDC1B-202ENST00000453022 FER1L6-AS1Q8NA97 138 aa5.56□□□□□ -1.52
DEPDC1B-202ENST00000453022 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
DEPDC1B-202ENST00000453022 TPPP3Q9BW30 176 aa5.56□□□□□ -1.52
DEPDC1B-202ENST00000453022 C19orf71A6NCJ1 209 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 UMAD1C9J7I0 102 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 ZNF345Q14585 488 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 CENPWQ5EE01 88 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 RASL11AQ6T310 242 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 C11orf52Q96A22 123 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 DPH3Q96FX2 82 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 CACNG7P62955 275 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 CCL20P78556 96 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 PRR3P79522 188 aaKnown RBP5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 COX6A2Q02221 97 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 OR2D3Q8NGH3 330 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 NIT2Q9NQR4 276 aa5.55□□□□□ -1.52
DEPDC1B-202ENST00000453022 GAGE12HA6NDE8 117 aa5.54□□□□□ -1.52
DEPDC1B-202ENST00000453022 HIGD2BQ4VC39 106 aa5.54□□□□□ -1.52
DEPDC1B-202ENST00000453022 WDR73Q6P4I2 378 aa5.54□□□□□ -1.52
DEPDC1B-202ENST00000453022 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
DEPDC1B-202ENST00000453022 C7orf33Q8WU49 177 aa5.54□□□□□ -1.52
DEPDC1B-202ENST00000453022 LINC01600Q96MT4 127 aa5.54□□□□□ -1.52
DEPDC1B-202ENST00000453022 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 IGKV2-24A0A0C4DH68 120 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 IGKV3OR2-268A0A0C4DH90 116 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 UBE2L6O14933 153 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 RPS10P46783 165 aaKnown RBP5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 AMTP48728 403 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 SULT1A2P50226 295 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 RPS20P60866 119 aaKnown RBP5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 LYZL1Q6UWQ5 148 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 DPH3P1Q9H4G8 78 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 MANBALQ9NQG1 85 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 GNG13Q9P2W3 67 aa5.53□□□□□ -1.52
DEPDC1B-202ENST00000453022 LPAP08519 4548 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 A0A096LNI7 61 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 RAB19A4D1S5 217 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 BCL2L11O43521 198 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 NDUFS6O75380 124 aaKnown RBP5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 TRGC1P0CF51 173 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 NTF3P20783 257 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 CTRLP40313 264 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 COTL1Q14019 142 aa5.52□□□□□ -1.53
DEPDC1B-202ENST00000453022 GVQW2A0A096LPI5 108 aaPredicted RBP5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 TRAV26-2A0A0B4J265 109 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 F2Z2F3 143 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 GNG4P50150 75 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 Q6ZNX1 250 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 STPG4Q8N801 248 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 GTSF1Q8WW33 167 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 CHCHD10Q8WYQ3 142 aaPredicted RBP5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 BATF3Q9NR55 127 aa5.51□□□□□ -1.53
DEPDC1B-202ENST00000453022 TRAV1-1A0A0B4J248 108 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 A0A0J9YXV3 536 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 KANTRA0A1W2PQU2 76 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 HMSDA8MTL9 139 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 IFNA1P01562 189 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 CFAP161Q6P656 301 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 C9orf62Q8N4C0 152 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 GATD1Q8NB37 220 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 LYPD6BQ8NI32 183 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 RPL39LQ96EH5 51 aaKnown RBP5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 SMIM12Q96EX1 92 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 XKRY2A2RUG3 117 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 KRTAP10-8P60410 259 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 MEF2BQ02080 365 aaPredicted RBP5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 FOXI1Q12951 378 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 CNFNQ9BYD5 112 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 CDIP1Q9H305 208 aa5.5□□□□□ -1.53
DEPDC1B-202ENST00000453022 RGS21Q2M5E4 152 aa5.49□□□□□ -1.53
DEPDC1B-202ENST00000453022 NUDT10Q8NFP7 164 aa5.49□□□□□ -1.53
DEPDC1B-202ENST00000453022 LINC00526Q96FQ7 95 aa5.49□□□□□ -1.53
DEPDC1B-202ENST00000453022 NUDT11Q96G61 164 aa5.49□□□□□ -1.53
DEPDC1B-202ENST00000453022 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
DEPDC1B-202ENST00000453022 PDE6DO43924 150 aa5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 APCSP02743 223 aa5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 FGF6P10767 208 aa5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 FOXA3P55318 350 aaPredicted RBP5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 TWIST1Q15672 202 aa5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 AMMECR1LQ6DCA0 310 aa5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 RNASEKQ6P5S7 137 aaKnown RBP5.48□□□□□ -1.53
DEPDC1B-202ENST00000453022 K7EN84 100 aa5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 NCR2O95944 276 aa5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 XCL1P47992 114 aa5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 EIF5AP63241 154 aaKnown RBP5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 SRSF9Q13242 221 aaKnown RBP eCLIP5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 SPINK6Q6UWN8 80 aa5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 OR5A1Q8NGJ0 315 aa5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 RNASE7Q9H1E1 156 aaKnown RBP5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 RPP21Q9H633 154 aaKnown RBP5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 MED9Q9NWA0 146 aa5.47□□□□□ -1.53
DEPDC1B-202ENST00000453022 LINC00959A0A1B0GUT2 108 aa5.46□□□□□ -1.53
DEPDC1B-202ENST00000453022 FAM231BA6NCW3 169 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms