RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 IGHV3-64A0A075B6Q5 118 aa8.5□□□□□ -1.05
VTA1-203ENST00000452973 GIG44P09565 113 aaPredicted RBP8.5□□□□□ -1.05
VTA1-203ENST00000452973 SPATA3Q8NHX4 192 aa8.5□□□□□ -1.05
VTA1-203ENST00000452973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
VTA1-203ENST00000452973 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
VTA1-203ENST00000452973 FXYD2P54710 66 aa8.5□□□□□ -1.05
VTA1-203ENST00000452973 SEC11AP67812 179 aa8.5□□□□□ -1.05
VTA1-203ENST00000452973 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
VTA1-203ENST00000452973 A6NDN8 102 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 CCL25O15444 150 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 RNASE8Q8TDE3 154 aaKnown RBP8.49□□□□□ -1.05
VTA1-203ENST00000452973 CLUHP3Q96NS8 147 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 RHODO00212 210 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 NDUFA11Q86Y39 141 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 HIST1H4GQ99525 98 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 VCX2Q9H322 139 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 C19orf73Q9NVV2 129 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 GAGE1Q13065 139 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
VTA1-203ENST00000452973 F8P00451 2351 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 GAGE12BA1L429 117 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 LINC01549A6NIU2 74 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 K7ERJ3 54 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 RS1O15537 224 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 GAGE7O76087 117 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 GAGE12FP0CL80 117 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 GAGE12GP0CL81 117 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 GAGE12IP0CL82 117 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 BEAN1Q3B7T3 259 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
VTA1-203ENST00000452973 LINC00467Q9BRT7 94 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 A0A0J9YXV3 536 aa8.48□□□□□ -1.05
VTA1-203ENST00000452973 IGLV4-3A0A075B6K6 122 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 TRGV2A0A075B6R0 118 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 E9PLD3 99 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 H3BUT2 72 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 CMC4P56277 68 aaPredicted RBP8.47□□□□□ -1.05
VTA1-203ENST00000452973 RBX1P62877 108 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 NHP2Q9NX24 153 aaKnown RBP8.47□□□□□ -1.05
VTA1-203ENST00000452973 TEP1Q99973 2627 aaKnown RBP8.47□□□□□ -1.05
VTA1-203ENST00000452973 UBE2V1Q13404 147 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 RNF151Q2KHN1 245 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 LINC00482Q8N8I6 264 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 HIGD1BQ9P298 99 aa8.47□□□□□ -1.05
VTA1-203ENST00000452973 HERVK_113P61574 105 aa8.46□□□□□ -1.05
VTA1-203ENST00000452973 RRN3P1Q2M238 152 aa8.46□□□□□ -1.05
VTA1-203ENST00000452973 PIK3CD-AS1Q5SR53 167 aa8.46□□□□□ -1.05
VTA1-203ENST00000452973 PLEKHB2Q96CS7 222 aa8.46□□□□□ -1.05
VTA1-203ENST00000452973 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
VTA1-203ENST00000452973 CEND1Q8N111 149 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 GAGE12JA6NER3 117 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 GAGE4Q13068 117 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 GAGE5Q13069 117 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 GAGE13Q4V321 117 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 PTH2Q96A98 100 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 CHCHD7Q9BUK0 85 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 C1QTNF4Q9BXJ3 329 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 EDA2RQ9HAV5 297 aa8.45□□□□□ -1.06
VTA1-203ENST00000452973 SMIM13P0DJ93 91 aa8.44□□□□□ -1.06
VTA1-203ENST00000452973 TSPEAR-AS2P59090 65 aa8.44□□□□□ -1.06
VTA1-203ENST00000452973 SRSF9Q13242 221 aaKnown RBP eCLIP8.44□□□□□ -1.06
VTA1-203ENST00000452973 SLC25A29Q8N8R3 303 aa8.44□□□□□ -1.06
VTA1-203ENST00000452973 CIDEAO60543 219 aa8.44□□□□□ -1.06
VTA1-203ENST00000452973 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
VTA1-203ENST00000452973 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.44□□□□□ -1.06
VTA1-203ENST00000452973 IL17DQ8TAD2 202 aa8.44□□□□□ -1.06
VTA1-203ENST00000452973 TRBV7-3A0A075B6L6 115 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 H3BRM9 83 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 DGAT2L7PQ6IED9 249 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 CSNK1G2-AS1Q8NCQ2 148 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 DEFB130BP0DP73 79 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 DEFB130AP0DP74 79 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 TRRAPQ9Y4A5 3859 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 LOC100131303A0A0U1RQF7 123 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 C9orf118A6NHY6 69 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
VTA1-203ENST00000452973 Q6ZUT4 128 aa8.43□□□□□ -1.06
VTA1-203ENST00000452973 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
VTA1-203ENST00000452973 K7EQD1 137 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 CRLF1O75462 422 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 LGALS3P17931 250 aaKnown RBP8.42□□□□□ -1.06
VTA1-203ENST00000452973 FAM104AQ969W3 186 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 FAM110AQ9BQ89 295 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 TRAV4A0A0B4J268 109 aa8.42□□□□□ -1.06
VTA1-203ENST00000452973 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
VTA1-203ENST00000452973 TRGV4A0A0C4DH28 118 aa8.41□□□□□ -1.06
VTA1-203ENST00000452973 J3QQQ9 107 aa8.41□□□□□ -1.06
VTA1-203ENST00000452973 GAGE10A6NGK3 116 aa8.41□□□□□ -1.06
VTA1-203ENST00000452973 DAZ2Q13117 558 aaKnown RBP8.41□□□□□ -1.06
VTA1-203ENST00000452973 TM2D2Q9BX73 214 aa8.41□□□□□ -1.06
VTA1-203ENST00000452973 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.06
VTA1-203ENST00000452973 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
VTA1-203ENST00000452973 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms