RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 F5H697 171 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 LGALS9O00182 355 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 IGKCP01834 107 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 MED14OSP0DP75 135 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 LINC00315P59091 139 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 PKIGQ9Y2B9 76 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 KIF25-AS1Q9Y6Z4 181 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 ATP5LO75964 103 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 RPL35AP18077 110 aaKnown RBP8.94□□□□□ -0.98
COL27A1-202ENST00000451716 C9orf153Q5TBE3 101 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 ZC2HC1BQ5TFG8 222 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 C10orf126Q8N4M7 172 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 ZMAT4Q9H898 229 aa8.94□□□□□ -0.98
COL27A1-202ENST00000451716 PRM2P04554 102 aa8.93□□□□□ -0.98
COL27A1-202ENST00000451716 FLNBO75369 2602 aaKnown RBP8.93□□□□□ -0.98
COL27A1-202ENST00000451716 A0A1W2PRX2 142 aa8.93□□□□□ -0.98
COL27A1-202ENST00000451716 DPM2O94777 84 aa8.93□□□□□ -0.98
COL27A1-202ENST00000451716 RNF152Q8N8N0 203 aa8.93□□□□□ -0.98
COL27A1-202ENST00000451716 IGHV3-16A0A0C4DH30 117 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 NXPH4O95158 308 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 SUMO4Q6EEV6 95 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 BAALCQ8WXS3 180 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 DEFB131AP59861 70 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 SRSF9Q13242 221 aaKnown RBP eCLIP8.92□□□□□ -0.985e-8■□□□□ 8.5
COL27A1-202ENST00000451716 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 V9GYY9 64 aa8.92□□□□□ -0.98
COL27A1-202ENST00000451716 PDZD2O15018 2839 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 DLX4Q92988 240 aaPredicted RBP8.91□□□□□ -0.98
COL27A1-202ENST00000451716 FAM236AA0A1B0GUQ0 79 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 FAM236BA0A1B0GV22 79 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 RBMY1A1P0DJD3 496 aaKnown RBP8.91□□□□□ -0.98
COL27A1-202ENST00000451716 RBMY1CP0DJD4 496 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
COL27A1-202ENST00000451716 RBMY1FQ15415 496 aaKnown RBP8.91□□□□□ -0.98
COL27A1-202ENST00000451716 ORMDL2Q53FV1 153 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 C2orf66Q6UXQ4 117 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 TMEM61Q8N0U2 210 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 CEND1Q8N111 149 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 KLHL30-AS1Q8NEE0 82 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 ZNRF2Q8NHG8 242 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 IGHV1OR15-1A0A075B7D0 117 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 LINC01619G3V211 115 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 TRPT1Q86TN4 253 aaKnown RBP8.91□□□□□ -0.98
COL27A1-202ENST00000451716 Q8N2B8 174 aa8.91□□□□□ -0.98
COL27A1-202ENST00000451716 JMJD1CQ15652 2540 aa8.9□□□□□ -0.98
COL27A1-202ENST00000451716 TOMM6Q96B49 74 aa8.9□□□□□ -0.98
COL27A1-202ENST00000451716 DUSP14O95147 198 aaKnown RBP8.9□□□□□ -0.99
COL27A1-202ENST00000451716 C9orf85Q96MD7 179 aa8.9□□□□□ -0.99
COL27A1-202ENST00000451716 Q6ZSV7 163 aa8.89□□□□□ -0.99
COL27A1-202ENST00000451716 ODF3Q96PU9 254 aa8.89□□□□□ -0.99
COL27A1-202ENST00000451716 PSMB2P49721 201 aa8.89□□□□□ -0.99
COL27A1-202ENST00000451716 ZNF56Q15929 161 aa8.89□□□□□ -0.99
COL27A1-202ENST00000451716 PRO0628Q9UI54 55 aa8.89□□□□□ -0.99
COL27A1-202ENST00000451716 DNAJC9-AS1A6NH13 148 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 RPL39P62891 51 aaKnown RBP8.88□□□□□ -0.99
COL27A1-202ENST00000451716 ZNF415Q09FC8 603 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 ZNF876PQ49A33 203 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 ESM1Q9NQ30 184 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 ZNF256Q9Y2P7 627 aaPredicted RBP8.88□□□□□ -0.99
COL27A1-202ENST00000451716 UNC79Q9P2D8 2635 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 RBMY1BA6NDE4 496 aaKnown RBP8.88□□□□□ -0.99
COL27A1-202ENST00000451716 RBMY1EA6NEQ0 496 aaKnown RBP8.88□□□□□ -0.99
COL27A1-202ENST00000451716 RBMY1DP0C7P1 496 aaKnown RBP8.88□□□□□ -0.99
COL27A1-202ENST00000451716 POM121L12Q8N7R1 296 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 MAPKAPK5-AS1Q8N8E1 139 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 C4orf3Q8WVX3 66 aa8.88□□□□□ -0.99
COL27A1-202ENST00000451716 IGHV3-73A0A0B4J1V6 119 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 SDHAF1A6NFY7 115 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 CRYGDP07320 174 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 MALP21145 153 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 ANKRD29Q8N6D5 301 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 C15orf53Q8NAA6 179 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 HIGD1BQ9P298 99 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 SFTA2Q6UW10 78 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 TP53TG1Q9Y2A0 90 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 F8VRH5 84 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 H7C1H1 209 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 POLR2KP53803 58 aaKnown RBP8.87□□□□□ -0.99
COL27A1-202ENST00000451716 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
COL27A1-202ENST00000451716 DYNLRB2Q8TF09 96 aa8.87□□□□□ -0.99
COL27A1-202ENST00000451716 TRBV25-1A0A075B6N4 114 aa8.86□□□□□ -0.99
COL27A1-202ENST00000451716 H3BMM0 161 aa8.86□□□□□ -0.99
COL27A1-202ENST00000451716 PPP1R17O96001 155 aa8.86□□□□□ -0.99
COL27A1-202ENST00000451716 ZFP2Q6ZN57 461 aa8.86□□□□□ -0.99
COL27A1-202ENST00000451716 PEMTQ9UBM1 199 aa8.86□□□□□ -0.99
COL27A1-202ENST00000451716 ANK3Q12955 4377 aaKnown RBP8.85□□□□□ -0.99
COL27A1-202ENST00000451716 A8MWV9 139 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 TSHBP01222 138 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 PLNP26678 52 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 C3orf22Q8N5N4 141 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 M0QY20 66 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 HLA-DRB4P13762 266 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 PROK1P58294 105 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 Q5XG85 94 aa8.85□□□□□ -0.99
COL27A1-202ENST00000451716 HLA-DRB4X5D2U9 266 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms