RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 CXCL1P09341 107 aa6.42□□□□□ -1.38
LINC01004-202ENST00000450686 RPL35P42766 123 aaKnown RBP6.42□□□□□ -1.38
LINC01004-202ENST00000450686 CNBPP62633 177 aaKnown RBP6.42□□□□□ -1.38
LINC01004-202ENST00000450686 CCL20P78556 96 aa6.42□□□□□ -1.38
LINC01004-202ENST00000450686 CIRBPQ14011 172 aaKnown RBP6.42□□□□□ -1.38
LINC01004-202ENST00000450686 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
LINC01004-202ENST00000450686 SPACA4Q8TDM5 124 aa6.42□□□□□ -1.38
LINC01004-202ENST00000450686 TCEAL7Q9BRU2 100 aa6.42□□□□□ -1.38
LINC01004-202ENST00000450686 IGHV3-64A0A075B6Q5 118 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 IGKV2-24A0A0C4DH68 120 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 A0A0D9SG52 128 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 RAB19A4D1S5 217 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 PFDN1O60925 122 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 PKIAP61925 76 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 TMUB2Q71RG4 321 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 KCNRGQ8N5I3 272 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.41□□□□□ -1.38
LINC01004-202ENST00000450686 MBD3L1Q8WWY6 194 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 TMEM243Q9BU79 118 aa6.41□□□□□ -1.38
LINC01004-202ENST00000450686 GAGE12HA6NDE8 117 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 IGLC6P0CF74 106 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 COX6A2Q02221 97 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 TMEM97Q5BJF2 176 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 CENPWQ5EE01 88 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 Q6ZRU5 148 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 FER1L6-AS1Q8NA97 138 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 OR2D3Q8NGH3 330 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 PRSS3P2Q8NHM4 247 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 LYPD6BQ8NI32 183 aa6.4□□□□□ -1.38
LINC01004-202ENST00000450686 LPAP08519 4548 aa6.39□□□□□ -1.39
LINC01004-202ENST00000450686 TRAV26-2A0A0B4J265 109 aa6.39□□□□□ -1.39
LINC01004-202ENST00000450686 S100A9P06702 114 aaKnown RBP6.39□□□□□ -1.39
LINC01004-202ENST00000450686 SULT1A2P50226 295 aa6.39□□□□□ -1.39
LINC01004-202ENST00000450686 MAJINQ3KP22 176 aa6.39□□□□□ -1.39
LINC01004-202ENST00000450686 CLRN3Q8NCR9 226 aa6.39□□□□□ -1.39
LINC01004-202ENST00000450686 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
LINC01004-202ENST00000450686 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
LINC01004-202ENST00000450686 LYZL1Q6UWQ5 148 aa6.38□□□□□ -1.39
LINC01004-202ENST00000450686 GTSF1Q8WW33 167 aa6.38□□□□□ -1.39
LINC01004-202ENST00000450686 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
LINC01004-202ENST00000450686 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
LINC01004-202ENST00000450686 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
LINC01004-202ENST00000450686 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
LINC01004-202ENST00000450686 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
LINC01004-202ENST00000450686 UBE2L6O14933 153 aa6.37□□□□□ -1.39
LINC01004-202ENST00000450686 AMTP48728 403 aa6.37□□□□□ -1.39
LINC01004-202ENST00000450686 TRBV20OR9-2A0A075B6H5 130 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 A0A096LNI7 61 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.36□□□□□ -1.39
LINC01004-202ENST00000450686 TRAV8-4A0A0B4J246 113 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 A0A1B0GUV1 79 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 C19orf71A6NCJ1 209 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 H7C1H1 209 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 BCL2L11O43521 198 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 P01737 135 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 NTF3P20783 257 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 FOXA3P55318 350 aaPredicted RBP6.36□□□□□ -1.39
LINC01004-202ENST00000450686 PRR3P79522 188 aaKnown RBP6.36□□□□□ -1.39
LINC01004-202ENST00000450686 Q6ZNX1 250 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 C11orf52Q96A22 123 aa6.36□□□□□ -1.39
LINC01004-202ENST00000450686 RPL39LQ96EH5 51 aaKnown RBP6.36□□□□□ -1.39
LINC01004-202ENST00000450686 UMAD1C9J7I0 102 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 CACNG7P62955 275 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 COTL1Q14019 142 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 WDR73Q6P4I2 378 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 STPG4Q8N801 248 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 GATD1Q8NB37 220 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 C7orf33Q8WU49 177 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 CHCHD10Q8WYQ3 142 aaPredicted RBP6.35□□□□□ -1.39
LINC01004-202ENST00000450686 RNF185Q96GF1 192 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 DPH3P1Q9H4G8 78 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 NIT2Q9NQR4 276 aa6.35□□□□□ -1.39
LINC01004-202ENST00000450686 KANTRA0A1W2PQU2 76 aa6.34□□□□□ -1.39
LINC01004-202ENST00000450686 IFNA1P01562 189 aa6.34□□□□□ -1.39
LINC01004-202ENST00000450686 RPS10P46783 165 aaKnown RBP6.34□□□□□ -1.39
LINC01004-202ENST00000450686 ZNF345Q14585 488 aa6.34□□□□□ -1.39
LINC01004-202ENST00000450686 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
LINC01004-202ENST00000450686 NUDT10Q8NFP7 164 aa6.34□□□□□ -1.39
LINC01004-202ENST00000450686 NUDT11Q96G61 164 aa6.34□□□□□ -1.39
LINC01004-202ENST00000450686 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
LINC01004-202ENST00000450686 NDUFS6O75380 124 aaKnown RBP6.33□□□□□ -1.4
LINC01004-202ENST00000450686 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 TRGC1P0CF51 173 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 XCL1P47992 114 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 GNG4P50150 75 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 RPS20P60866 119 aaKnown RBP6.33□□□□□ -1.4
LINC01004-202ENST00000450686 TWIST1Q15672 202 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 LINC01600Q96MT4 127 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 RNASE7Q9H1E1 156 aaKnown RBP6.33□□□□□ -1.4
LINC01004-202ENST00000450686 MANBALQ9NQG1 85 aa6.33□□□□□ -1.4
LINC01004-202ENST00000450686 GVQW2A0A096LPI5 108 aaPredicted RBP6.32□□□□□ -1.4
LINC01004-202ENST00000450686 CTRLP40313 264 aa6.32□□□□□ -1.4
LINC01004-202ENST00000450686 FOXI1Q12951 378 aa6.32□□□□□ -1.4
LINC01004-202ENST00000450686 RGS21Q2M5E4 152 aa6.32□□□□□ -1.4
LINC01004-202ENST00000450686 AMMECR1LQ6DCA0 310 aa6.32□□□□□ -1.4
LINC01004-202ENST00000450686 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
LINC01004-202ENST00000450686 K7EN84 100 aa6.31□□□□□ -1.4
LINC01004-202ENST00000450686 FGF6P10767 208 aa6.31□□□□□ -1.4
LINC01004-202ENST00000450686 BATF3Q9NR55 127 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms