RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 EIF5AL1Q6IS14 154 aaKnown RBP18.07■□□□□ 0.48
CBX4-202ENST00000448310 UBE2L6O14933 153 aa18.06■□□□□ 0.48
CBX4-202ENST00000448310 SLPIP03973 132 aa18.06■□□□□ 0.48
CBX4-202ENST00000448310 BCL2P10415 239 aa18.06■□□□□ 0.48
CBX4-202ENST00000448310 AMTP48728 403 aa18.06■□□□□ 0.48
CBX4-202ENST00000448310 NUDT10Q8NFP7 164 aa18.06■□□□□ 0.48
CBX4-202ENST00000448310 NUDT11Q96G61 164 aa18.06■□□□□ 0.48
CBX4-202ENST00000448310 CTRLP40313 264 aa18.05■□□□□ 0.48
CBX4-202ENST00000448310 COTL1Q14019 142 aa18.05■□□□□ 0.48
CBX4-202ENST00000448310 C9orf62Q8N4C0 152 aa18.05■□□□□ 0.48
CBX4-202ENST00000448310 BIN3Q9NQY0 253 aa18.05■□□□□ 0.48
CBX4-202ENST00000448310 AP5S1Q9NUS5 200 aa18.04■□□□□ 0.48
CBX4-202ENST00000448310 UBR4Q5T4S7 5183 aa18.03■□□□□ 0.48
CBX4-202ENST00000448310 IGHV3-64A0A075B6Q5 118 aa18.03■□□□□ 0.48
CBX4-202ENST00000448310 CHTF8P0CG12 524 aa18.03■□□□□ 0.48
CBX4-202ENST00000448310 CIRBPQ14011 172 aaKnown RBP18.03■□□□□ 0.48
CBX4-202ENST00000448310 TWIST1Q15672 202 aa18.03■□□□□ 0.48
CBX4-202ENST00000448310 TRAV26-2A0A0B4J265 109 aa18.02■□□□□ 0.48
CBX4-202ENST00000448310 RNASE7Q9H1E1 156 aaKnown RBP18.02■□□□□ 0.48
CBX4-202ENST00000448310 IGKV3OR2-268A0A0C4DH90 116 aa18.01■□□□□ 0.47
CBX4-202ENST00000448310 WDR73Q6P4I2 378 aa18.01■□□□□ 0.47
CBX4-202ENST00000448310 GATD1Q8NB37 220 aa18.01■□□□□ 0.47
CBX4-202ENST00000448310 PLA2G2DQ9UNK4 145 aa18.01■□□□□ 0.47
CBX4-202ENST00000448310 TRAV16A0A0A6YYK6 109 aaPredicted RBP18■□□□□ 0.47
CBX4-202ENST00000448310 DPH3Q96FX2 82 aa18■□□□□ 0.47
CBX4-202ENST00000448310 RPP21Q9H633 154 aaKnown RBP18■□□□□ 0.47
CBX4-202ENST00000448310 GAGE12HA6NDE8 117 aa17.99■□□□□ 0.47
CBX4-202ENST00000448310 K7EN84 100 aa17.99■□□□□ 0.47
CBX4-202ENST00000448310 CNFNQ9BYD5 112 aa17.99■□□□□ 0.47
CBX4-202ENST00000448310 A0A087WYN8 130 aa17.98■□□□□ 0.47
CBX4-202ENST00000448310 C15orf56Q8N910 161 aa17.98■□□□□ 0.47
CBX4-202ENST00000448310 RPL39LQ96EH5 51 aaKnown RBP17.98■□□□□ 0.47
CBX4-202ENST00000448310 Q6ZNX1 250 aa17.97■□□□□ 0.47
CBX4-202ENST00000448310 OCC1Q8TAD7 63 aa17.96■□□□□ 0.47
CBX4-202ENST00000448310 SPACA4Q8TDM5 124 aa17.96■□□□□ 0.47
CBX4-202ENST00000448310 FOXA3P55318 350 aaPredicted RBP17.95■□□□□ 0.46
CBX4-202ENST00000448310 HIGD2BQ4VC39 106 aa17.94■□□□□ 0.46
CBX4-202ENST00000448310 SLC51BQ86UW2 128 aa17.94■□□□□ 0.46
CBX4-202ENST00000448310 GTSF1Q8WW33 167 aa17.94■□□□□ 0.46
CBX4-202ENST00000448310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.93■□□□□ 0.46
CBX4-202ENST00000448310 IGKV2-29A2NJV5 120 aaPredicted RBP17.93■□□□□ 0.46
CBX4-202ENST00000448310 MT1HL1P0DM35 61 aa17.93■□□□□ 0.46
CBX4-202ENST00000448310 AMMECR1LQ6DCA0 310 aa17.93■□□□□ 0.46
CBX4-202ENST00000448310 RNF185Q96GF1 192 aa17.93■□□□□ 0.46
CBX4-202ENST00000448310 TCTE3Q8IZS6 198 aa17.92■□□□□ 0.46
CBX4-202ENST00000448310 TAGLN2P37802 199 aaKnown RBP17.91■□□□□ 0.46
CBX4-202ENST00000448310 RNASEKQ6P5S7 137 aaKnown RBP17.91■□□□□ 0.46
CBX4-202ENST00000448310 CFAP161Q6P656 301 aa17.91■□□□□ 0.46
CBX4-202ENST00000448310 CHCHD10Q8WYQ3 142 aaPredicted RBP17.91■□□□□ 0.46
CBX4-202ENST00000448310 COX6A2Q02221 97 aa17.9■□□□□ 0.46
CBX4-202ENST00000448310 Q6ZRU5 148 aa17.9■□□□□ 0.46
CBX4-202ENST00000448310 APCSP02743 223 aa17.89■□□□□ 0.45
CBX4-202ENST00000448310 SMIM15Q7Z3B0 74 aa17.89■□□□□ 0.45
CBX4-202ENST00000448310 NCR2O95944 276 aa17.88■□□□□ 0.45
CBX4-202ENST00000448310 PLAC8Q9NZF1 115 aa17.88■□□□□ 0.45
CBX4-202ENST00000448310 SDHAF1A6NFY7 115 aa17.87■□□□□ 0.45
CBX4-202ENST00000448310 FGF6P10767 208 aa17.87■□□□□ 0.45
CBX4-202ENST00000448310 RPS10P46783 165 aaKnown RBP17.87■□□□□ 0.45
CBX4-202ENST00000448310 PRSS3P2Q8NHM4 247 aa17.87■□□□□ 0.45
CBX4-202ENST00000448310 PHOX2AO14813 284 aa17.86■□□□□ 0.45
CBX4-202ENST00000448310 GATCO43716 136 aaKnown RBP17.86■□□□□ 0.45
CBX4-202ENST00000448310 IGKV2-24A0A0C4DH68 120 aa17.85■□□□□ 0.45
CBX4-202ENST00000448310 H7C423 109 aa17.84■□□□□ 0.45
CBX4-202ENST00000448310 MAJINQ3KP22 176 aa17.84■□□□□ 0.45
CBX4-202ENST00000448310 NDUFS6O75380 124 aaKnown RBP17.83■□□□□ 0.44
CBX4-202ENST00000448310 GAS8-AS1O95177 125 aa17.83■□□□□ 0.44
CBX4-202ENST00000448310 TEX261Q6UWH6 196 aa17.83■□□□□ 0.44
CBX4-202ENST00000448310 GVQW2A0A096LPI5 108 aaPredicted RBP17.82■□□□□ 0.44
CBX4-202ENST00000448310 FAM231BA6NCW3 169 aa17.82■□□□□ 0.44
CBX4-202ENST00000448310 PMCHP20382 165 aa17.82■□□□□ 0.44
CBX4-202ENST00000448310 FOXI1Q12951 378 aa17.82■□□□□ 0.44
CBX4-202ENST00000448310 C7orf33Q8WU49 177 aa17.82■□□□□ 0.44
CBX4-202ENST00000448310 I3L3M4 83 aa17.81■□□□□ 0.44
CBX4-202ENST00000448310 A8MWL6 223 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 TMEM250H0YL14 139 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 XCL1P47992 114 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 CEBPGP53567 150 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 FAM231DQ6ZW35 169 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 OR5A1Q8NGJ0 315 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 TNXBP22105 4242 aa17.8■□□□□ 0.44
CBX4-202ENST00000448310 ALKAL2Q6UX46 152 aa17.79■□□□□ 0.44
CBX4-202ENST00000448310 TRBV6-5A0A0K0K1A5 114 aa17.78■□□□□ 0.44
CBX4-202ENST00000448310 ZNF25P17030 456 aaPredicted RBP17.78■□□□□ 0.44
CBX4-202ENST00000448310 STPG4Q8N801 248 aa17.78■□□□□ 0.44
CBX4-202ENST00000448310 LINC00526Q96FQ7 95 aa17.78■□□□□ 0.44
CBX4-202ENST00000448310 TMEM242Q9NWH2 141 aa17.78■□□□□ 0.44
CBX4-202ENST00000448310 A0A096LNI7 61 aa17.77■□□□□ 0.44
CBX4-202ENST00000448310 TSHBP01222 138 aa17.77■□□□□ 0.44
CBX4-202ENST00000448310 LYPD6BQ8NI32 183 aa17.77■□□□□ 0.44
CBX4-202ENST00000448310 TMEM101Q96IK0 257 aa17.77■□□□□ 0.44
CBX4-202ENST00000448310 BTF3L4Q96K17 158 aa17.77■□□□□ 0.44
CBX4-202ENST00000448310 LINC00959A0A1B0GUT2 108 aa17.76■□□□□ 0.43
CBX4-202ENST00000448310 CCL25O15444 150 aa17.76■□□□□ 0.43
CBX4-202ENST00000448310 ESDP10768 282 aa17.76■□□□□ 0.43
CBX4-202ENST00000448310 BLOC1S1P78537 153 aa17.75■□□□□ 0.43
CBX4-202ENST00000448310 CT83Q5H943 113 aa17.75■□□□□ 0.43
CBX4-202ENST00000448310 ST20Q9HBF5 79 aa17.75■□□□□ 0.43
CBX4-202ENST00000448310 BORCS7Q96B45 105 aa17.74■□□□□ 0.43
CBX4-202ENST00000448310 PRR3P79522 188 aaKnown RBP17.73■□□□□ 0.43
CBX4-202ENST00000448310 MRAP2Q96G30 205 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms