RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PRELID3AQ96N28 172 aa5.18□□□□□ -1.58
AC004540.1-206ENST00000448056 C20orf78Q9BR46 151 aa5.18□□□□□ -1.58
AC004540.1-206ENST00000448056 MRPS16Q9Y3D3 137 aaKnown RBP5.18□□□□□ -1.58
AC004540.1-206ENST00000448056 TRAPPC1Q9Y5R8 145 aa5.18□□□□□ -1.58
AC004540.1-206ENST00000448056 TRBV6-8A0A0A6YYG3 113 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 SDHAF1A6NFY7 115 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 PRSS47A8MTI9 375 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 I3L3M4 83 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 VCYO14598 125 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 PHOX2AO14813 284 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 NPYP01303 97 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 SUMO2P61956 95 aaKnown RBP5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 LELP1Q5T871 98 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 NTM-AS1Q6ZSK4 140 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 UBE2DNLQ8IWF7 75 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 LINC00476Q8WZB0 136 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 UPK3BQ9BT76 320 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 TMEM70Q9BUB7 260 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 LAMTOR2Q9Y2Q5 125 aa5.17□□□□□ -1.58
AC004540.1-206ENST00000448056 TRAV8-6A0A0B4J262 113 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 TRBV27A0A0K0K1C4 114 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 LCE6AA0A183 80 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 PMCHP20382 165 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 RPL32P62910 135 aaKnown RBP5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 TMEM97Q5BJF2 176 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 DEFB104AQ8WTQ1 72 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 LYSTQ99698 3801 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 ALKBH7Q9BT30 221 aaPredicted RBP5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 Q9H8V8 135 aa5.16□□□□□ -1.58
AC004540.1-206ENST00000448056 C9orf118A6NHY6 69 aa5.15□□□□□ -1.59
AC004540.1-206ENST00000448056 TSHBP01222 138 aa5.15□□□□□ -1.59
AC004540.1-206ENST00000448056 RAB5AP20339 215 aa5.15□□□□□ -1.59
AC004540.1-206ENST00000448056 COTL1Q14019 142 aa5.15□□□□□ -1.59
AC004540.1-206ENST00000448056 IQCJQ1A5X6 159 aa5.15□□□□□ -1.59
AC004540.1-206ENST00000448056 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
AC004540.1-206ENST00000448056 IGLV2-18A0A075B6J9 118 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 TRBV25-1A0A075B6N4 114 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 IGHV1-24A0A0C4DH33 117 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 LOC389332A0A1B0GUA5 103 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 SIVA1O15304 175 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 WFDC10BQ8IUB3 73 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 KIR2DL4Q99706 377 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 SMIM2Q9BVW6 85 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 MAP1LC3AQ9H492 121 aa5.14□□□□□ -1.59
AC004540.1-206ENST00000448056 KMT2CQ8NEZ4 4911 aaKnown RBP5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 TMEM262E9PQX1 116 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 TCAPO15273 167 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 TRGC2P03986 189 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 DNAH10OSP0CZ25 163 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 FCER1GP30273 86 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 IFI27P40305 119 aaPredicted RBP5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 AMTP48728 403 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 LINC01556Q5JQF7 62 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 NIT1Q86X76 327 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 Q8N8P6 123 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 CHCHD5Q9BSY4 110 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 TMEM243Q9BU79 118 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 CHCHD7Q9BUK0 85 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 VPS13DQ5THJ4 4388 aa5.13□□□□□ -1.59
AC004540.1-206ENST00000448056 DNAH1Q9P2D7 4330 aa5.12□□□□□ -1.59
AC004540.1-206ENST00000448056 TRAV9-2A0A087WT02 112 aa5.12□□□□□ -1.59
AC004540.1-206ENST00000448056 ESDP10768 282 aa5.12□□□□□ -1.59
AC004540.1-206ENST00000448056 PRSS3P2Q8NHM4 247 aa5.12□□□□□ -1.59
AC004540.1-206ENST00000448056 NXT2Q9NPJ8 142 aaKnown RBP5.12□□□□□ -1.59
AC004540.1-206ENST00000448056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 A0A087WX48 190 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 NBDYA0A0U1RRE5 68 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 IGKV2-29A2NJV5 120 aaPredicted RBP5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 H7C423 109 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 K7EMI3 77 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 K7EP13 123 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 M0R2N4 97 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 UBE2L6O14933 153 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 IGHV3-30P01768 117 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 IGHV3-33P01772 117 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 IGHV3-30-3P0DP02 117 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 IGHV3-30-5P0DP03 117 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 PKIAP61925 76 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 GAGE6Q13070 117 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 Q6ZR54 194 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 C18orf32Q8TCD1 76 aa5.11□□□□□ -1.59
AC004540.1-206ENST00000448056 ALMS1Q8TCU4 4167 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 A0A1B0GUV1 79 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 LINC01546A6NGU7 62 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 LINC00614P0C842 121 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 RBX1P62877 108 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 KMT2AQ03164 3969 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 LAGE3Q14657 143 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 ORMDL2Q53FV1 153 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 MPV17L2Q567V2 206 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 Q8N976 141 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 C20orf203Q8NBC4 194 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
AC004540.1-206ENST00000448056 IGLV4-60A0A075B6I1 120 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 IBA57-AS1B1ANH7 110 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 FGF6P10767 208 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 Q0VG73 95 aa5.09□□□□□ -1.59
AC004540.1-206ENST00000448056 TTC32Q5I0X7 151 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms