RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 DAZ4Q86SG3 579 aaKnown RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 DAZ1Q9NQZ3 744 aaKnown RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 DAZ3Q9NR90 486 aaKnown RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 RHPN1-AS1Q9BWJ2 59 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 EIF4EBP3O60516 100 aaPredicted RBP3.76□□□□□ -1.81
HERC1-201ENST00000443617 C22orf34Q6ZV56 151 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 U3KQE9 123 aa3.76□□□□□ -1.81
HERC1-201ENST00000443617 IGHV3-11P01762 117 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 F8W735 103 aaPredicted RBP3.75□□□□□ -1.81
HERC1-201ENST00000443617 DSCR8Q96T75 97 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 C4orf26Q17RF5 130 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 RNF152Q8N8N0 203 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 ZNF625Q96I27 306 aaPredicted RBP3.75□□□□□ -1.81
HERC1-201ENST00000443617 CFAP54Q96N23 3096 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 F6UB75 175 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 RNASE3P12724 160 aaKnown RBP3.75□□□□□ -1.81
HERC1-201ENST00000443617 C5orf38Q86SI9 138 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 LINC00308Q8TCZ7 52 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 RPL18AQ02543 176 aaKnown RBP3.75□□□□□ -1.81
HERC1-201ENST00000443617 DPH3Q96FX2 82 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 LINC01600Q96MT4 127 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 USP24Q9UPU5 2620 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 IGHV1OR15-1A0A075B7D0 117 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 LINC00158P58513 81 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 NDUFA4O00483 81 aa3.75□□□□□ -1.81
HERC1-201ENST00000443617 CEMP1Q6PRD7 247 aaPredicted RBP3.75□□□□□ -1.81
HERC1-201ENST00000443617 NDUFA1O15239 70 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 CRYGAP11844 174 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 HOXD3P31249 432 aaPredicted RBP3.74□□□□□ -1.81
HERC1-201ENST00000443617 C14orf132Q9NPU4 83 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 Q9HAA7 133 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 CRPP02741 224 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 CHD9Q3L8U1 2897 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 PRIMA1Q86XR5 153 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 IGLV4-3A0A075B6K6 122 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 USP17L23D6RBM5 183 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 ODF3BA8MYP8 253 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 C1orf43Q9BWL3 253 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 TRBV6-5A0A0K0K1A5 114 aa3.74□□□□□ -1.81
HERC1-201ENST00000443617 PAX4O43316 350 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 RBMY1BA6NDE4 496 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 RBMY1EA6NEQ0 496 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 RBMY1DP0C7P1 496 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 RBMY1A1P0DJD3 496 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 RBMY1CP0DJD4 496 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 RBMY1FQ15415 496 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 PYGO1Q9Y3Y4 419 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 WIPF1O43516 503 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 ZNF415Q09FC8 603 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 MRPS36P82909 103 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 IGHV3OR16-10A0A075B7F0 116 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 UTRNP46939 3433 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 Q6JHZ5 121 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 KLK9Q9UKQ9 250 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 DSPP15924 2871 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 TRAV12-2A0A075B6T6 113 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 LINC00315P59091 139 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 H0YGX0 51 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 RNF223E7ERA6 249 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
HERC1-201ENST00000443617 SMCR5Q8TEV8 140 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 MOB4Q9Y3A3 225 aa3.73□□□□□ -1.81
HERC1-201ENST00000443617 FLNBO75369 2602 aaKnown RBP3.72□□□□□ -1.81
HERC1-201ENST00000443617 LAMA2P24043 3122 aaKnown RBP3.72□□□□□ -1.81
HERC1-201ENST00000443617 DEFB124Q8NES8 71 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 C10orf105Q8TEF2 133 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 NDUFC2-KCTD14E9PQ53 114 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 Q8N6K4 173 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 TNRC6BQ9UPQ9 1833 aaKnown RBP3.72□□□□□ -1.81
HERC1-201ENST00000443617 A8MZ25 164 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 IGFL3Q6UXB1 125 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 ZNF580Q9UK33 172 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 LY6HO94772 140 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 RPL36AP83881 106 aaKnown RBP3.72□□□□□ -1.81
HERC1-201ENST00000443617 Q6ZSV7 163 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 RPL36ALQ969Q0 106 aaKnown RBP3.72□□□□□ -1.81
HERC1-201ENST00000443617 SERP1Q9Y6X1 66 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 MAST4O15021 2626 aa3.72□□□□□ -1.81
HERC1-201ENST00000443617 IGHG2P01859 326 aa3.71□□□□□ -1.81
HERC1-201ENST00000443617 IGFL2Q6UWQ7 119 aa3.71□□□□□ -1.81
HERC1-201ENST00000443617 CDKN2A-AS1Q9UH64 79 aa3.71□□□□□ -1.81
HERC1-201ENST00000443617 KIF25-AS1Q9Y6Z4 181 aa3.71□□□□□ -1.81
HERC1-201ENST00000443617 TRBV12-3P01733 135 aa3.71□□□□□ -1.81
HERC1-201ENST00000443617 KIR2DL5BQ8NHK3 375 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 FAM19A4Q96LR4 140 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 HIST2H2BCQ6DN03 193 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 HIST2H2BDQ6DRA6 164 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.71□□□□□ -1.82
HERC1-201ENST00000443617 NCR3O14931 201 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 LITAFQ99732 161 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 KNCNA6PVL3 124 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 GHRHP01286 108 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 RBM3P98179 157 aaKnown RBP3.71□□□□□ -1.82
HERC1-201ENST00000443617 UNQ9165/PRO28630Q6UXU0 137 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 Q8N9W7 124 aa3.71□□□□□ -1.82
HERC1-201ENST00000443617 C9orf85Q96MD7 179 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms