RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 FER1L6-AS1Q8NA97 138 aa12.73□□□□□ -0.37
TMEM50B-204ENST00000442441 A0A096LNI7 61 aa12.72□□□□□ -0.37
TMEM50B-204ENST00000442441 IGKV3OR2-268A0A0C4DH90 116 aa12.72□□□□□ -0.37
TMEM50B-204ENST00000442441 IGLC6P0CF74 106 aa12.72□□□□□ -0.37
TMEM50B-204ENST00000442441 SFT2D1Q8WV19 159 aa12.72□□□□□ -0.37
TMEM50B-204ENST00000442441 NIT2Q9NQR4 276 aa12.72□□□□□ -0.37
TMEM50B-204ENST00000442441 GVQW2A0A096LPI5 108 aaPredicted RBP12.71□□□□□ -0.37
TMEM50B-204ENST00000442441 CACNG7P62955 275 aa12.71□□□□□ -0.37
TMEM50B-204ENST00000442441 COTL1Q14019 142 aa12.71□□□□□ -0.37
TMEM50B-204ENST00000442441 MBD3L1Q8WWY6 194 aa12.71□□□□□ -0.37
TMEM50B-204ENST00000442441 A0A1B0GV50 99 aa12.7□□□□□ -0.38
TMEM50B-204ENST00000442441 SRSF9Q13242 221 aaKnown RBP eCLIP12.7□□□□□ -0.38
TMEM50B-204ENST00000442441 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
TMEM50B-204ENST00000442441 RPL35P42766 123 aaKnown RBP12.69□□□□□ -0.38
TMEM50B-204ENST00000442441 RPS20P60866 119 aaKnown RBP12.69□□□□□ -0.38
TMEM50B-204ENST00000442441 LINC00474Q9P2X8 69 aa12.69□□□□□ -0.38
TMEM50B-204ENST00000442441 ARPC5O15511 151 aa12.68□□□□□ -0.38
TMEM50B-204ENST00000442441 OR2D3Q8NGH3 330 aa12.68□□□□□ -0.38
TMEM50B-204ENST00000442441 FAM213BQ8TBF2 198 aa12.68□□□□□ -0.38
TMEM50B-204ENST00000442441 G3V3Q6 166 aa12.67□□□□□ -0.38
TMEM50B-204ENST00000442441 TRGC1P0CF51 173 aa12.67□□□□□ -0.38
TMEM50B-204ENST00000442441 Q6ZRP5 223 aa12.67□□□□□ -0.38
TMEM50B-204ENST00000442441 F2Z2F3 143 aa12.66□□□□□ -0.38
TMEM50B-204ENST00000442441 KCNRGQ8N5I3 272 aa12.66□□□□□ -0.38
TMEM50B-204ENST00000442441 PKIGQ9Y2B9 76 aa12.66□□□□□ -0.38
TMEM50B-204ENST00000442441 LCE2DQ5TA82 110 aaPredicted RBP12.65□□□□□ -0.38
TMEM50B-204ENST00000442441 AMMECR1LQ6DCA0 310 aa12.65□□□□□ -0.38
TMEM50B-204ENST00000442441 LPAP08519 4548 aa12.65□□□□□ -0.38
TMEM50B-204ENST00000442441 UMAD1C9J7I0 102 aa12.64□□□□□ -0.39
TMEM50B-204ENST00000442441 FOXI1Q12951 378 aa12.64□□□□□ -0.39
TMEM50B-204ENST00000442441 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
TMEM50B-204ENST00000442441 C19orf71A6NCJ1 209 aa12.63□□□□□ -0.39
TMEM50B-204ENST00000442441 NTF3P20783 257 aa12.63□□□□□ -0.39
TMEM50B-204ENST00000442441 CENPWQ5EE01 88 aa12.63□□□□□ -0.39
TMEM50B-204ENST00000442441 LYZL1Q6UWQ5 148 aa12.63□□□□□ -0.39
TMEM50B-204ENST00000442441 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
TMEM50B-204ENST00000442441 C11orf52Q96A22 123 aa12.62□□□□□ -0.39
TMEM50B-204ENST00000442441 H2AFB1P0C5Y9 115 aa12.61□□□□□ -0.39
TMEM50B-204ENST00000442441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 IGKV2-29A2NJV5 120 aaPredicted RBP12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 H7C423 109 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 NCR2O95944 276 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 IFNA1P01562 189 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 Q6ZNX1 250 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 GATD1Q8NB37 220 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 LINC00526Q96FQ7 95 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 CARD19Q96LW7 228 aa12.6□□□□□ -0.39
TMEM50B-204ENST00000442441 FGF6P10767 208 aa12.59□□□□□ -0.39
TMEM50B-204ENST00000442441 XCL1P47992 114 aa12.59□□□□□ -0.39
TMEM50B-204ENST00000442441 C9orf62Q8N4C0 152 aa12.59□□□□□ -0.39
TMEM50B-204ENST00000442441 TRAV26-2A0A0B4J265 109 aa12.58□□□□□ -0.4
TMEM50B-204ENST00000442441 IGHV1-58A0A0C4DH39 117 aa12.58□□□□□ -0.4
TMEM50B-204ENST00000442441 OR5A1Q8NGJ0 315 aa12.58□□□□□ -0.4
TMEM50B-204ENST00000442441 SMIM12Q96EX1 92 aa12.58□□□□□ -0.4
TMEM50B-204ENST00000442441 APCSP02743 223 aa12.57□□□□□ -0.4
TMEM50B-204ENST00000442441 MANBALQ9NQG1 85 aa12.57□□□□□ -0.4
TMEM50B-204ENST00000442441 GNG13Q9P2W3 67 aa12.57□□□□□ -0.4
TMEM50B-204ENST00000442441 RAB19A4D1S5 217 aa12.56□□□□□ -0.4
TMEM50B-204ENST00000442441 FAM231BA6NCW3 169 aa12.56□□□□□ -0.4
TMEM50B-204ENST00000442441 CTRLP40313 264 aa12.56□□□□□ -0.4
TMEM50B-204ENST00000442441 GNG4P50150 75 aa12.56□□□□□ -0.4
TMEM50B-204ENST00000442441 CCL20P78556 96 aa12.56□□□□□ -0.4
TMEM50B-204ENST00000442441 TWIST1Q15672 202 aa12.56□□□□□ -0.4
TMEM50B-204ENST00000442441 LINC00959A0A1B0GUT2 108 aa12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 CCL25O15444 150 aa12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 ZNF25P17030 456 aaPredicted RBP12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 PTTG1IPP53801 180 aa12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 SYCNQ0VAF6 134 aa12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 ZNF345Q14585 488 aa12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 RPL39LQ96EH5 51 aaKnown RBP12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 CNFNQ9BYD5 112 aa12.55□□□□□ -0.4
TMEM50B-204ENST00000442441 SMLR1H3BR10 107 aa12.54□□□□□ -0.4
TMEM50B-204ENST00000442441 ZNF561-AS1K7EIQ3 104 aa12.53□□□□□ -0.4
TMEM50B-204ENST00000442441 TMEM101Q96IK0 257 aa12.53□□□□□ -0.4
TMEM50B-204ENST00000442441 BTF3L4Q96K17 158 aa12.53□□□□□ -0.4
TMEM50B-204ENST00000442441 BIN3Q9NQY0 253 aa12.53□□□□□ -0.4
TMEM50B-204ENST00000442441 SDHAF1A6NFY7 115 aa12.52□□□□□ -0.41
TMEM50B-204ENST00000442441 TRBV20OR9-2A0A075B6H5 130 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 LOC107984640A0A0U1RRK4 108 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 GAGE2BQ13066 116 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 ZNF664Q8N3J9 261 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 NUDT10Q8NFP7 164 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 NUDT11Q96G61 164 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 PSORS1C2Q9UIG4 136 aa12.51□□□□□ -0.41
TMEM50B-204ENST00000442441 A0A1W2PNN7 141 aa12.5□□□□□ -0.41
TMEM50B-204ENST00000442441 CAMPP49913 170 aa12.5□□□□□ -0.41
TMEM50B-204ENST00000442441 SS18Q15532 418 aa12.5□□□□□ -0.41
TMEM50B-204ENST00000442441 TEX261Q6UWH6 196 aa12.5□□□□□ -0.41
TMEM50B-204ENST00000442441 CD164L2Q6UWJ8 174 aa12.5□□□□□ -0.41
TMEM50B-204ENST00000442441 TRAV1-1A0A0B4J248 108 aa12.49□□□□□ -0.41
TMEM50B-204ENST00000442441 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
TMEM50B-204ENST00000442441 BCL2L11O43521 198 aa12.49□□□□□ -0.41
TMEM50B-204ENST00000442441 MT-ND6P03923 174 aa12.49□□□□□ -0.41
TMEM50B-204ENST00000442441 ISOC2Q96AB3 205 aa12.49□□□□□ -0.41
TMEM50B-204ENST00000442441 I3L3M4 83 aa12.48□□□□□ -0.41
TMEM50B-204ENST00000442441 PDE6DO43924 150 aa12.48□□□□□ -0.41
TMEM50B-204ENST00000442441 PMCHP20382 165 aa12.48□□□□□ -0.41
TMEM50B-204ENST00000442441 FOXA3P55318 350 aaPredicted RBP12.48□□□□□ -0.41
TMEM50B-204ENST00000442441 SMIM15Q7Z3B0 74 aa12.48□□□□□ -0.41
TMEM50B-204ENST00000442441 MED9Q9NWA0 146 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms