RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LOXP28300 417 aaPredicted RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 KRTAP27-1Q3LI81 207 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 MUSTN1Q8IVN3 82 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 FXYD5Q96DB9 178 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 LAMTOR3Q9UHA4 124 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 TRAV23DV6A0A075B6W5 121 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 TRBV6-6A0A0A6YYG2 114 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 SRRM4A7MD48 611 aaKnown RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 PRSS46E5RG02 174 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 M0R1W7 72 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 PAX4O43316 350 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 IGLV2-14P01704 120 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 IGLV3-1P01715 115 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 S100A4P26447 101 aaKnown RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 DUTP33316 252 aaKnown RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 FAM27BQ5VT28 67 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 Q8IYB0 196 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 LY6G5BQ8NDX9 201 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 FAM167A-AS1Q96KT0 104 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 CYSTM1Q9H1C7 97 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 PLA2G2DQ9UNK4 145 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 PCSK5Q92824 1860 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 DNAH1Q9P2D7 4330 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 ANK3Q12955 4377 aaKnown RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-21A0A0B4J1V1 117 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 J3QT63 122 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-30P01768 117 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 IGHV3-30-5P0DP03 117 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 RPL39P5Q59GN2 51 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 FOXL2NBQ6ZUU3 175 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 NFAM1Q8NET5 270 aaPredicted RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 IMMP1LQ96LU5 166 aa2.12□□□□□ -2.07
LIG4-203ENST00000442234 TNRC6BQ9UPQ9 1833 aaKnown RBP2.12□□□□□ -2.07
LIG4-203ENST00000442234 MGPP08493 103 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 PSMB8P28062 276 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 UBE2E1P51965 193 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 FHL2Q14192 279 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 RUSC1-AS1Q66K80 236 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 ZNF497Q6ZNH5 498 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 C9orf139Q6ZV77 190 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 IGKV1OR2-108A0A075B7D4 117 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 TRAV12-1A0A0B4J245 112 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 TRAV21A0A0B4J279 112 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 TRBV30A0A0K0K1B3 111 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 C17orf100A8MU93 164 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 BAALC-AS2P0C853 105 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 P0C879 139 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 NDPQ00604 133 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 DAZ2Q13117 558 aaKnown RBP2.11□□□□□ -2.07
LIG4-203ENST00000442234 C2orf66Q6UXQ4 117 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 FAM19A1Q7Z5A9 133 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 FAM90A1Q86YD7 464 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 TMEM190Q8WZ59 177 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 MRPL53Q96EL3 112 aaKnown RBP2.11□□□□□ -2.07
LIG4-203ENST00000442234 PRR25Q96S07 402 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 DAZ3Q9NR90 486 aaKnown RBP2.11□□□□□ -2.07
LIG4-203ENST00000442234 DYNC2H1Q8NCM8 4307 aaKnown RBP2.11□□□□□ -2.07
LIG4-203ENST00000442234 H3BS24 57 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 XCL1P47992 114 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 ZNF625Q96I27 306 aaPredicted RBP2.11□□□□□ -2.07
LIG4-203ENST00000442234 RITA1Q96K30 269 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 TIMM21Q9BVV7 248 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 KRTAP4-8Q9BYQ9 185 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 XCL2Q9UBD3 114 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 SNURFQ9Y675 71 aa2.11□□□□□ -2.07
LIG4-203ENST00000442234 TRBV7-6A0A0J9YX20 115 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 FAM223BA6NKX1 122 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 A8MZ25 164 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 F8WEM9 126 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 LY6LH3BQJ8 138 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 LST1O00453 97 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 SAA4P35542 130 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 MRPS36P82909 103 aaKnown RBP2.1□□□□□ -2.07
LIG4-203ENST00000442234 PRCDQ00LT1 54 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 C10orf128Q5T292 105 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 C5orf38Q86SI9 138 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 C17orf82Q86X59 251 aaPredicted RBP2.1□□□□□ -2.07
LIG4-203ENST00000442234 C8orf49Q96NF6 230 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 MSRB1Q9NZV6 116 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 LINC00474Q9P2X8 69 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 SLC25A15Q9Y619 301 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 U3KQK5 164 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 C11orf86A6NJI1 115 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 BUB3O43684 328 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 Q6ZSR3 168 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 SMCR5Q8TEV8 140 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 DEFB104AQ8WTQ1 72 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 TMEM263Q8WUH6 116 aaKnown RBP2.1□□□□□ -2.07
LIG4-203ENST00000442234 VSIG2Q96IQ7 327 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 DCTN5Q9BTE1 182 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 FAT3Q8TDW7 4589 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 RYR3Q15413 4870 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 APELAP0DMC3 54 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 ZNF134P52741 427 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 HCP5Q6MZN7 132 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 IGFL3Q6UXB1 125 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 SMIM2Q9BVW6 85 aa2.1□□□□□ -2.07
LIG4-203ENST00000442234 SOCS3O14543 225 aa2.09□□□□□ -2.07
LIG4-203ENST00000442234 IGLV3-21P80748 117 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms