RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 Q9UF83 564 aa11.13□□□□□ -0.63
MCF2L-217ENST00000441756 IGHV1-24A0A0C4DH33 117 aa11.12□□□□□ -0.63
MCF2L-217ENST00000441756 NUDT3O95989 172 aa11.12□□□□□ -0.63
MCF2L-217ENST00000441756 TSHBP01222 138 aa11.12□□□□□ -0.63
MCF2L-217ENST00000441756 GTSF1LQ9H1H1 148 aa11.12□□□□□ -0.63
MCF2L-217ENST00000441756 IGHV3-38A0A0C4DH36 116 aa11.11□□□□□ -0.63
MCF2L-217ENST00000441756 NUPR1O60356 82 aa11.11□□□□□ -0.63
MCF2L-217ENST00000441756 C15orf53Q8NAA6 179 aa11.11□□□□□ -0.63
MCF2L-217ENST00000441756 CYSLTR1Q9Y271 337 aa11.11□□□□□ -0.63
MCF2L-217ENST00000441756 BTF3P20290 206 aaKnown RBP11.1□□□□□ -0.63
MCF2L-217ENST00000441756 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
MCF2L-217ENST00000441756 FAM19A2Q8N3H0 131 aa11.1□□□□□ -0.63
MCF2L-217ENST00000441756 TENM3Q9P273 2699 aa11.09□□□□□ -0.63
MCF2L-217ENST00000441756 TRBV25-1A0A075B6N4 114 aa11.09□□□□□ -0.63
MCF2L-217ENST00000441756 HSPB8Q9UJY1 196 aa11.09□□□□□ -0.63
MCF2L-217ENST00000441756 LEPROTL1O95214 131 aa11.08□□□□□ -0.64
MCF2L-217ENST00000441756 FABP4P15090 132 aa11.08□□□□□ -0.64
MCF2L-217ENST00000441756 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
MCF2L-217ENST00000441756 C2orf66Q6UXQ4 117 aa11.08□□□□□ -0.64
MCF2L-217ENST00000441756 HIST1H2BLQ99880 126 aa11.08□□□□□ -0.64
MCF2L-217ENST00000441756 MEGF8Q7Z7M0 2845 aa11.08□□□□□ -0.64
MCF2L-217ENST00000441756 A0A096LPF7 62 aa11.07□□□□□ -0.64
MCF2L-217ENST00000441756 TRBV6-8A0A0A6YYG3 113 aa11.07□□□□□ -0.64
MCF2L-217ENST00000441756 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
MCF2L-217ENST00000441756 TOMM6Q96B49 74 aa11.07□□□□□ -0.64
MCF2L-217ENST00000441756 TMEM243Q9BU79 118 aa11.07□□□□□ -0.64
MCF2L-217ENST00000441756 A0A096LNJ9 63 aa11.06□□□□□ -0.64
MCF2L-217ENST00000441756 NUPR2A6NF83 97 aa11.06□□□□□ -0.64
MCF2L-217ENST00000441756 H7C423 109 aa11.06□□□□□ -0.64
MCF2L-217ENST00000441756 ATP5LO75964 103 aa11.06□□□□□ -0.64
MCF2L-217ENST00000441756 TIRAPP58753 221 aa11.06□□□□□ -0.64
MCF2L-217ENST00000441756 UBE2L6O14933 153 aa11.05□□□□□ -0.64
MCF2L-217ENST00000441756 DEFB104AQ8WTQ1 72 aa11.05□□□□□ -0.64
MCF2L-217ENST00000441756 CHCHD7Q9BUK0 85 aa11.05□□□□□ -0.64
MCF2L-217ENST00000441756 PKIAP61925 76 aa11.04□□□□□ -0.64
MCF2L-217ENST00000441756 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
MCF2L-217ENST00000441756 SPANXA1Q9NS26 97 aa11.04□□□□□ -0.64
MCF2L-217ENST00000441756 KLK5Q9Y337 293 aaPredicted RBP11.04□□□□□ -0.64
MCF2L-217ENST00000441756 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.03□□□□□ -0.64
MCF2L-217ENST00000441756 NPSP0C0P6 89 aa11.03□□□□□ -0.64
MCF2L-217ENST00000441756 PAPPA-AS1Q5QFB9 102 aa11.03□□□□□ -0.64
MCF2L-217ENST00000441756 NTM-AS1Q6ZSK4 140 aa11.03□□□□□ -0.64
MCF2L-217ENST00000441756 ERASQ7Z444 233 aa11.03□□□□□ -0.64
MCF2L-217ENST00000441756 TMEM141Q96I45 108 aa11.03□□□□□ -0.64
MCF2L-217ENST00000441756 TIMM17AQ99595 171 aa11.03□□□□□ -0.64
MCF2L-217ENST00000441756 IFITM10A6NMD0 228 aa11.02□□□□□ -0.65
MCF2L-217ENST00000441756 IGLL5B9A064 214 aa11.02□□□□□ -0.65
MCF2L-217ENST00000441756 LELP1Q5T871 98 aa11.02□□□□□ -0.65
MCF2L-217ENST00000441756 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
MCF2L-217ENST00000441756 CHCHD5Q9BSY4 110 aa11.02□□□□□ -0.65
MCF2L-217ENST00000441756 TIMM21Q9BVV7 248 aa11.02□□□□□ -0.65
MCF2L-217ENST00000441756 MAP1LC3CQ9BXW4 147 aa11.02□□□□□ -0.65
MCF2L-217ENST00000441756 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-217ENST00000441756 IGKV2-29A2NJV5 120 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-217ENST00000441756 ZNF25P17030 456 aaPredicted RBP11.01□□□□□ -0.65
MCF2L-217ENST00000441756 TCTAP57738 103 aa11.01□□□□□ -0.65
MCF2L-217ENST00000441756 RPL39P62891 51 aaKnown RBP11.01□□□□□ -0.65
MCF2L-217ENST00000441756 AMMECR1LQ6DCA0 310 aa11.01□□□□□ -0.65
MCF2L-217ENST00000441756 Q6ZN92 141 aa11.01□□□□□ -0.65
MCF2L-217ENST00000441756 OR10D4PQ8NGN7 298 aa11.01□□□□□ -0.65
MCF2L-217ENST00000441756 IFI27L1Q96BM0 104 aa11.01□□□□□ -0.65
MCF2L-217ENST00000441756 PYGO1Q9Y3Y4 419 aa11.01□□□□□ -0.65
MCF2L-217ENST00000441756 TRAV8-6A0A0B4J262 113 aa11□□□□□ -0.65
MCF2L-217ENST00000441756 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
MCF2L-217ENST00000441756 MRPL52Q86TS9 123 aaKnown RBP11□□□□□ -0.65
MCF2L-217ENST00000441756 TMEM101Q96IK0 257 aa11□□□□□ -0.65
MCF2L-217ENST00000441756 FGF6P10767 208 aa10.99□□□□□ -0.65
MCF2L-217ENST00000441756 AKR1D1P51857 326 aa10.99□□□□□ -0.65
MCF2L-217ENST00000441756 KRTDAPP60985 99 aa10.99□□□□□ -0.65
MCF2L-217ENST00000441756 LYPD5Q6UWN5 251 aa10.99□□□□□ -0.65
MCF2L-217ENST00000441756 UBE2D4Q9Y2X8 147 aa10.99□□□□□ -0.65
MCF2L-217ENST00000441756 HUWE1Q7Z6Z7 4374 aaKnown RBP10.99□□□□□ -0.65
MCF2L-217ENST00000441756 C20orf202A1L168 122 aa10.98□□□□□ -0.65
MCF2L-217ENST00000441756 IGIPA6NJ69 53 aa10.98□□□□□ -0.65
MCF2L-217ENST00000441756 OR5A1Q8NGJ0 315 aa10.98□□□□□ -0.65
MCF2L-217ENST00000441756 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
MCF2L-217ENST00000441756 LOC105371267A0A1B0GV96 52 aa10.97□□□□□ -0.65
MCF2L-217ENST00000441756 CCL18P55774 89 aa10.97□□□□□ -0.65
MCF2L-217ENST00000441756 GAGE6Q13070 117 aa10.97□□□□□ -0.65
MCF2L-217ENST00000441756 STAB2Q8WWQ8 2551 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 SYS1-DBNDD2H3BUS1 97 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 PRSS1P07477 247 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 C3orf79P0CE67 100 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 MRPS36P82909 103 aaKnown RBP10.96□□□□□ -0.65
MCF2L-217ENST00000441756 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 WWC2-AS2Q96NR7 200 aa10.96□□□□□ -0.65
MCF2L-217ENST00000441756 DNAH9Q9NYC9 4486 aa10.95□□□□□ -0.66
MCF2L-217ENST00000441756 A0A087WX48 190 aa10.95□□□□□ -0.66
MCF2L-217ENST00000441756 TMEM262E9PQX1 116 aa10.95□□□□□ -0.66
MCF2L-217ENST00000441756 SPATA12Q7Z6I5 190 aa10.95□□□□□ -0.66
MCF2L-217ENST00000441756 IGLV4-3A0A075B6K6 122 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 H0Y8G0 127 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 ESRGQ1W209 222 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 TEX43Q6ZNM6 134 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 BAALCQ8WXS3 180 aa10.94□□□□□ -0.66
MCF2L-217ENST00000441756 C2orf88Q9BSF0 95 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms