RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PFN4Q8NHR9 129 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 RETNLBQ9BQ08 111 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 GABARAPL1Q9H0R8 117 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 SCN7AQ01118 1682 aa2.57□□□□□ -2
CDC42BPA-207ENST00000441725 LTBP2Q14767 1821 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 EML5Q05BV3 1969 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 CFAP46Q8IYW2 2715 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 GNRH2O43555 120 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 IGKV1D-33P01593 117 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 IGKV1-33P01594 117 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 IGLV1-51P01701 117 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 ZNF56Q15929 161 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 FAM223AQ8IWN6 122 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 FAM19A2Q8N3H0 131 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 MRPL35Q9NZE8 188 aaKnown RBP2.56□□□□□ -2
CDC42BPA-207ENST00000441725 SMAD5-AS1Q9Y6J3 95 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 PIEZO2Q9H5I5 2752 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 DDX60LQ5H9U9 1706 aaKnown RBP2.56□□□□□ -2
CDC42BPA-207ENST00000441725 MED13Q9UHV7 2174 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 LCTP09848 1927 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 BAZ2BQ9UIF8 2168 aaKnown RBP2.56□□□□□ -2
CDC42BPA-207ENST00000441725 C17orf51A8MQB3 221 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 PRB4P10163 310 aaPredicted RBP2.56□□□□□ -2
CDC42BPA-207ENST00000441725 CYP2G1PQ6ZSU1 146 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 Q8IYB0 196 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 RNF5Q99942 180 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 NDUFA12Q9UI09 145 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 TRAPPC1Q9Y5R8 145 aa2.56□□□□□ -2
CDC42BPA-207ENST00000441725 A0A0G2JMZ2 1700 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 ANKRD36CQ5JPF3 1778 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 C16orf90A8MZG2 172 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 CXCL8P10145 99 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 CNEP1R1Q8N9A8 125 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 FAM103A1Q9BTL3 118 aaKnown RBP2.55□□□□□ -2
CDC42BPA-207ENST00000441725 BPESC1Q9GZL8 116 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 EP300Q09472 2414 aaPredicted RBP2.55□□□□□ -2
CDC42BPA-207ENST00000441725 ITPR1Q14643 2758 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 COL4A4P53420 1690 aaPredicted RBP2.55□□□□□ -2
CDC42BPA-207ENST00000441725 ZNF236Q9UL36 1845 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 TECTAO75443 2155 aa2.55□□□□□ -2
CDC42BPA-207ENST00000441725 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
CDC42BPA-207ENST00000441725 IGKV2D-26A0A0A0MRZ7 120 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 IGHV3-30-3P0DP02 117 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 PIPP12273 146 aaPredicted RBP2.54□□□□□ -2
CDC42BPA-207ENST00000441725 DEFA4P12838 97 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 FAM229BQ4G0N7 80 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 LINC00643Q86TS7 51 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 BAGE3Q86Y29 109 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 BAGE2Q86Y30 109 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 Q8N814 137 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 LINC00574Q9H8X3 128 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 XAGE1AQ9HD64 81 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 ARL2-SNX15V9GYD0 113 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 MYO9AB2RTY4 2548 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 KALRNO60229 2985 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 LOC400499M0QZD8 3231 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 IGHV3-21A0A0B4J1V1 117 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 A0A0D9SFI3 127 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 TCRBV4S1A1TA0A5B7 111 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 FXYD1O00168 92 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 FXYD7P58549 80 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 ESRGQ1W209 222 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 ASB16-AS1Q495Z4 193 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 TMEM170BQ5T4T1 132 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
CDC42BPA-207ENST00000441725 SMG1Q96Q15 3661 aaKnown RBP2.54□□□□□ -2
CDC42BPA-207ENST00000441725 UBR5O95071 2799 aaPredicted RBP2.54□□□□□ -2
CDC42BPA-207ENST00000441725 MYO7AQ13402 2215 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 TRAV13-2A0A0B4J235 113 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 ACYP1P07311 99 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 XCL1P47992 114 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 NOVP48745 357 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 LCE1EQ5T753 118 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 UBALD1Q8TB05 177 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 U3KQK5 164 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 DLG5Q8TDM6 1919 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 MGAMO43451 1857 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 IGSF10Q6WRI0 2623 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 CNOT1A5YKK6 2376 aaKnown RBP2.53□□□□□ -2
CDC42BPA-207ENST00000441725 FBN2P35556 2912 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 C5orf67F2Z3F1 127 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 LECT2O14960 151 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 CPSF4O95639 269 aaKnown RBP2.53□□□□□ -2
CDC42BPA-207ENST00000441725 IGHV1-69P01742 117 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 RPL28P46779 137 aaKnown RBP2.53□□□□□ -2
CDC42BPA-207ENST00000441725 ZCCHC23Q6ZST2 131 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 TOMM5Q8N4H5 51 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 Q8NDZ9 215 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 TMEM141Q96I45 108 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 PROK2Q9HC23 129 aa2.53□□□□□ -2
CDC42BPA-207ENST00000441725 PRRC2BQ5JSZ5 2229 aaKnown RBP2.53□□□□□ -2.01
CDC42BPA-207ENST00000441725 ANKRD36A6QL64 1941 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 BRWD1Q9NSI6 2320 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 MUC22E2RYF6 1773 aaPredicted RBP2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 MYOFQ9NZM1 2061 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 HEATR5BQ9P2D3 2071 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 TRBV6-7A0A0A0MS04 114 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 C2orf70A6NJV1 201 aa2.52□□□□□ -2.01
CDC42BPA-207ENST00000441725 A8MU10 97 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms