RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ELANEP08246 267 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 Q6YL49 198 aa9.92□□□□□ -0.82
HERPUD1-204ENST00000439977 TRGV11A0A075B6L2 103 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 NFE4Q86UQ8 179 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 IGHV3OR16-12A0A075B7B8 117 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 J3QR89 54 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 RHOHQ15669 191 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 CFAP126Q5VTH2 177 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 SIGMAR1Q99720 223 aa9.91□□□□□ -0.82
HERPUD1-204ENST00000439977 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 IGKV2-29A2NJV5 120 aaPredicted RBP9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 H3BMM0 161 aa9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 NPC2P61916 151 aa9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 TNFRSF18Q9Y5U5 241 aa9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 IGHV4-31P0DP07 118 aa9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 MUSTN1Q8IVN3 82 aa9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 C10orf126Q8N4M7 172 aa9.9□□□□□ -0.82
HERPUD1-204ENST00000439977 EIF4EBP3O60516 100 aaPredicted RBP9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 PRSS2P07478 247 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 LINC01587Q99440 93 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 FAM104AQ969W3 186 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 PRO1854Q9UHT4 67 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 TMEM89A2RUT3 159 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 UBE2D3P61077 147 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 UBE2D2P62837 147 aa9.89□□□□□ -0.83
HERPUD1-204ENST00000439977 APCP25054 2843 aa9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 LEPROTO15243 131 aa9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 A0A1W2PRX2 142 aa9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 IGHV3-30-3P0DP02 117 aa9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 FOXI1Q12951 378 aa9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 BBC3Q96PG8 261 aaPredicted RBP9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 XCL2Q9UBD3 114 aa9.88□□□□□ -0.83
HERPUD1-204ENST00000439977 J3QLI3 93 aa9.87□□□□□ -0.83
HERPUD1-204ENST00000439977 DYNLRB2Q8TF09 96 aa9.87□□□□□ -0.83
HERPUD1-204ENST00000439977 SPINK8P0C7L1 97 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 Q1RN00 199 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 MTORP42345 2549 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 ACANP16112 2415 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 A0A0J9YXY3 114 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 M0R2P5 195 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 Q5PR19 223 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 TIMM21Q9BVV7 248 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 MAP6D1Q9H9H5 199 aa9.86□□□□□ -0.83
HERPUD1-204ENST00000439977 Q6ZSV7 163 aa9.85□□□□□ -0.83
HERPUD1-204ENST00000439977 UBR5O95071 2799 aaPredicted RBP9.85□□□□□ -0.83
HERPUD1-204ENST00000439977 Q96MF0 132 aa9.85□□□□□ -0.83
HERPUD1-204ENST00000439977 LINC00467Q9BRT7 94 aa9.85□□□□□ -0.83
HERPUD1-204ENST00000439977 ITPR3Q14573 2671 aa9.84□□□□□ -0.83
HERPUD1-204ENST00000439977 FHL3Q13643 280 aa9.84□□□□□ -0.83
HERPUD1-204ENST00000439977 ADAMTSL4-AS1Q5T5F5 129 aa9.84□□□□□ -0.83
HERPUD1-204ENST00000439977 Q6ZUT4 128 aa9.84□□□□□ -0.83
HERPUD1-204ENST00000439977 DAND5Q8N907 189 aa9.84□□□□□ -0.83
HERPUD1-204ENST00000439977 CARD19Q96LW7 228 aa9.84□□□□□ -0.83
HERPUD1-204ENST00000439977 FSHBP01225 129 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 IGHV3-53P01767 116 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 ERG28Q9UKR5 140 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 A8MWV9 139 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 C9JAW5 83 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 IGHV3-33P01772 117 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 ZNF415Q09FC8 603 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 SPATA25Q9BR10 227 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 CHCHD7Q9BUK0 85 aa9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 FLNAP21333 2647 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-204ENST00000439977 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 NDUFA12Q9UI09 145 aa9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 MRPS36P82909 103 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 DEFB114Q30KQ6 69 aa9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 RNF152Q8N8N0 203 aa9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 PEMTQ9UBM1 199 aa9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 UBE2D4Q9Y2X8 147 aa9.82□□□□□ -0.84
HERPUD1-204ENST00000439977 NDUFA7O95182 113 aa9.81□□□□□ -0.84
HERPUD1-204ENST00000439977 ANKRD29Q8N6D5 301 aa9.81□□□□□ -0.84
HERPUD1-204ENST00000439977 C11orf72Q8NBR9 251 aa9.81□□□□□ -0.84
HERPUD1-204ENST00000439977 LYRM7Q5U5X0 104 aa9.81□□□□□ -0.84
HERPUD1-204ENST00000439977 ZNF625Q96I27 306 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 SETXQ7Z333 2677 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 TRBV20-1A0A075B6N2 111 aa9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 TEN1Q86WV5 123 aa9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 CDIP1Q9H305 208 aa9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 GEMIN7Q9H840 131 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 CDKN2A-AS1Q9UH64 79 aa9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 CR1P17927 2039 aa9.8□□□□□ -0.84
HERPUD1-204ENST00000439977 TRGV1A0A0A0MS02 117 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 IGHV1-58A0A0C4DH39 117 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 DEFB113Q30KQ7 82 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 LITAFQ99732 161 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 SLC25A20O43772 301 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 DGAT2L7PQ6IED9 249 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 C4orf3Q8WVX3 66 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 MT-ATP8P03928 68 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 ODF3L2Q3SX64 289 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
HERPUD1-204ENST00000439977 INSP01308 110 aa9.78□□□□□ -0.84
HERPUD1-204ENST00000439977 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
HERPUD1-204ENST00000439977 COX6A2Q02221 97 aa9.78□□□□□ -0.84
HERPUD1-204ENST00000439977 LINC00694P0DN24 101 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms