RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NOP10Q9NPE3 64 aaKnown RBP5□□□□□ -1.61
CSDE1-205ENST00000438362 IGLV2-18A0A075B6J9 118 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 TMEM223A0PJW6 202 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 GHRHP01286 108 aa5□□□□□ -1.61
CSDE1-205ENST00000438362 BAALC-AS2P0C853 105 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 IGHV3-33P01772 117 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 MT-ATP8P03928 68 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 HIST1H4AP62805 103 aaKnown RBP4.99□□□□□ -1.61
CSDE1-205ENST00000438362 C9orf153Q5TBE3 101 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 CFAP126Q5VTH2 177 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 SOCS3O14543 225 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 IGHV3-30P01768 117 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 IGHV3-30-5P0DP03 117 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 DAZ2Q13117 558 aaKnown RBP4.99□□□□□ -1.61
CSDE1-205ENST00000438362 MIAQ16674 131 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 DAZ4Q86SG3 579 aaKnown RBP4.99□□□□□ -1.61
CSDE1-205ENST00000438362 CLEC2BQ92478 149 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 SPANXDQ9BXN6 97 aa4.99□□□□□ -1.61
CSDE1-205ENST00000438362 DAZ3Q9NR90 486 aaKnown RBP4.99□□□□□ -1.61
CSDE1-205ENST00000438362 TRAV26-1A0A087WT03 109 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 ACYP1P07311 99 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 MYO18BQ8IUG5 2567 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 TINCRA0A1B0GVN0 87 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 K7EQD1 137 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 CCL24O00175 119 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 NFE4Q86UQ8 179 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 EDA2RQ9HAV5 297 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 IGIPA6NJ69 53 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 INSL3P51460 131 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 Q6ZS46 218 aa4.98□□□□□ -1.61
CSDE1-205ENST00000438362 NXPH4O95158 308 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 SPATA25Q9BR10 227 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 CRYGDP07320 174 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 LAMTOR3Q9UHA4 124 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 SETD2Q9BYW2 2564 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-205ENST00000438362 CHD8Q9HCK8 2581 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 TSHBP01222 138 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 C10orf99Q6UWK7 81 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 DCANP1Q8TF63 244 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 C9orf85Q96MD7 179 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 SND1-IT1Q9HBX3 110 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 SPTBN4Q9H254 2564 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 IGLV1-40P01703 118 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 PSMB8P28062 276 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 UBE2D1P51668 147 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 C5orf38Q86SI9 138 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 MAP6D1Q9H9H5 199 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 CDKN2A-AS1Q9UH64 79 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 SS18L2Q9UHA2 77 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 PYGO1Q9Y3Y4 419 aa4.97□□□□□ -1.61
CSDE1-205ENST00000438362 TRBV10-1A0A0K0K1A3 114 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 A0A1W2PPR1 153 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 LINC00467Q9BRT7 94 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 HIVEP2P31629 2446 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 CRIP2P52943 208 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-205ENST00000438362 TRAV25A0A0B4J276 109 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 TEX49A0A1B0GTD5 131 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 TRIAP1O43715 76 aa4.96□□□□□ -1.62
CSDE1-205ENST00000438362 TRBV30A0A0K0K1B3 111 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 PROK1P58294 105 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 LINC01546A6NGU7 62 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 H0YGX0 51 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 XCL1P47992 114 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 DEFB113Q30KQ7 82 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 COX7B2Q8TF08 81 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 C4orf3Q8WVX3 66 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 RNF183Q96D59 192 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 C16orf74Q96GX8 76 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 ABCA2Q9BZC7 2435 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 IGLV4-69A0A075B6H9 119 aa4.95□□□□□ -1.62
CSDE1-205ENST00000438362 CLPSL2Q6UWE3 100 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 A0A096LPF7 62 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 TMEM263Q8WUH6 116 aaKnown RBP4.94□□□□□ -1.62
CSDE1-205ENST00000438362 SPTBN5Q9NRC6 3674 aaKnown RBP4.94□□□□□ -1.62
CSDE1-205ENST00000438362 FAM236AA0A1B0GUQ0 79 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 FAM236BA0A1B0GV22 79 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 TIRAPP58753 221 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 DAD1P61803 113 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 MIR7-3HGQ8N6C7 128 aa4.94□□□□□ -1.62
CSDE1-205ENST00000438362 PRUNE2Q8WUY3 3088 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 COX7A2LO14548 114 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 ANGP03950 147 aaKnown RBP4.93□□□□□ -1.62
CSDE1-205ENST00000438362 XGP55808 180 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 UBE2D3P61077 147 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 UBE2D2P62837 147 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 Q6YL49 198 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 UBL5Q9BZL1 73 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 PRORYQ9H606 182 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 TRIOO75962 3097 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 CFAP54Q96N23 3096 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 TRAV4A0A0B4J268 109 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 A8MZ25 164 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 F5H768 121 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 RS1O15537 224 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 EDN2P20800 178 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 NDUFV3P56181 108 aaKnown RBP4.93□□□□□ -1.62
CSDE1-205ENST00000438362 TSPEAR-AS2P59090 65 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 DEFB114Q30KQ6 69 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 Q6ZTI0 123 aa4.93□□□□□ -1.62
CSDE1-205ENST00000438362 LINC00308Q8TCZ7 52 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms