RNA–Protein interactions for RNA: ENST00000437002.5

MMS19-208, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, human

APPRIS ALT2 TSL 5

Gene MMS19, Length 933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMS19-208	ENST00000437002	RASL11A	Q6T310	242 aa		11.27	□□□□□ -0.61
MMS19-208	ENST00000437002	TEX261	Q6UWH6	196 aa		11.27	□□□□□ -0.61
MMS19-208	ENST00000437002	OR2D3	Q8NGH3	330 aa		11.27	□□□□□ -0.61
MMS19-208	ENST00000437002	RNF185	Q96GF1	192 aa		11.27	□□□□□ -0.61
MMS19-208	ENST00000437002		H7C1H1	209 aa		11.26	□□□□□ -0.61
MMS19-208	ENST00000437002	DPH3	Q96FX2	82 aa		11.26	□□□□□ -0.61
MMS19-208	ENST00000437002	RAB19	A4D1S5	217 aa		11.25	□□□□□ -0.61
MMS19-208	ENST00000437002	PGLYRP4	Q96LB8	373 aa		11.25	□□□□□ -0.61
MMS19-208	ENST00000437002	AP5S1	Q9NUS5	200 aa		11.25	□□□□□ -0.61
MMS19-208	ENST00000437002	GNG13	Q9P2W3	67 aa		11.25	□□□□□ -0.61
MMS19-208	ENST00000437002	TRBV20OR9-2	A0A075B6H5	130 aa		11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	GAGE12H	A6NDE8	117 aa		11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	CACNG7	P62955	275 aa		11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	COX6A2	Q02221	97 aa		11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	EIF5AL1	Q6IS14	154 aa	Known RBP	11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	PRSS3P2	Q8NHM4	247 aa		11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	NIT2	Q9NQR4	276 aa		11.24	□□□□□ -0.61
MMS19-208	ENST00000437002	HIGD2B	Q4VC39	106 aa		11.23	□□□□□ -0.61
MMS19-208	ENST00000437002	LYZL1	Q6UWQ5	148 aa		11.23	□□□□□ -0.61
MMS19-208	ENST00000437002	AMT	P48728	403 aa		11.22	□□□□□ -0.61
MMS19-208	ENST00000437002	RPS20	P60866	119 aa	Known RBP	11.22	□□□□□ -0.61
MMS19-208	ENST00000437002	IGKV3OR2-268	A0A0C4DH90	116 aa		11.21	□□□□□ -0.61
MMS19-208	ENST00000437002	NTF3	P20783	257 aa		11.21	□□□□□ -0.61
MMS19-208	ENST00000437002	SULT1A2	P50226	295 aa		11.21	□□□□□ -0.61
MMS19-208	ENST00000437002	PRR3	P79522	188 aa	Known RBP	11.21	□□□□□ -0.61
MMS19-208	ENST00000437002	DPH3P1	Q9H4G8	78 aa		11.21	□□□□□ -0.61
MMS19-208	ENST00000437002	MANBAL	Q9NQG1	85 aa		11.21	□□□□□ -0.61
MMS19-208	ENST00000437002	TRAV26-2	A0A0B4J265	109 aa		11.2	□□□□□ -0.62
MMS19-208	ENST00000437002		F2Z2F3	143 aa		11.2	□□□□□ -0.62
MMS19-208	ENST00000437002	COTL1	Q14019	142 aa		11.2	□□□□□ -0.62
MMS19-208	ENST00000437002	GATD1	Q8NB37	220 aa		11.2	□□□□□ -0.62
MMS19-208	ENST00000437002	LINC01600	Q96MT4	127 aa		11.2	□□□□□ -0.62
MMS19-208	ENST00000437002	TRAV1-1	A0A0B4J248	108 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	IGKV2-24	A0A0C4DH68	120 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	UBE2L6	O14933	153 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	CTRL	P40313	264 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	RPS10	P46783	165 aa	Known RBP	11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	MAJIN	Q3KP22	176 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	WDR73	Q6P4I2	378 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	ALKAL2	Q6UX46	152 aa		11.19	□□□□□ -0.62
MMS19-208	ENST00000437002	NDUFS6	O75380	124 aa	Known RBP	11.18	□□□□□ -0.62
MMS19-208	ENST00000437002	IFNA1	P01562	189 aa		11.18	□□□□□ -0.62
MMS19-208	ENST00000437002	TRGC1	P0CF51	173 aa		11.18	□□□□□ -0.62
MMS19-208	ENST00000437002	GNG4	P50150	75 aa		11.18	□□□□□ -0.62
MMS19-208	ENST00000437002	C7orf33	Q8WU49	177 aa		11.18	□□□□□ -0.62
MMS19-208	ENST00000437002	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.18	□□□□□ -0.62
MMS19-208	ENST00000437002		A0A096LNI7	61 aa		11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	STPG4	Q8N801	248 aa		11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	LYPD6B	Q8NI32	183 aa		11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	GTSF1	Q8WW33	167 aa		11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	RPL39L	Q96EH5	51 aa	Known RBP	11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	SMIM12	Q96EX1	92 aa		11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	CNFN	Q9BYD5	112 aa		11.17	□□□□□ -0.62
MMS19-208	ENST00000437002	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	FOXA3	P55318	350 aa	Predicted RBP	11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	FOXI1	Q12951	378 aa		11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	CFAP161	Q6P656	301 aa		11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	NUDT10	Q8NFP7	164 aa		11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	NUDT11	Q96G61	164 aa		11.16	□□□□□ -0.62
MMS19-208	ENST00000437002	XKRY2	A2RUG3	117 aa		11.15	□□□□□ -0.62
MMS19-208	ENST00000437002	RAB14	P61106	215 aa		11.15	□□□□□ -0.62
MMS19-208	ENST00000437002	CLLU1	Q5K131	121 aa		11.15	□□□□□ -0.62
MMS19-208	ENST00000437002	KRTAP10-8	P60410	259 aa		11.14	□□□□□ -0.63
MMS19-208	ENST00000437002	MEF2B	Q02080	365 aa	Predicted RBP	11.14	□□□□□ -0.63
MMS19-208	ENST00000437002	TWIST1	Q15672	202 aa		11.14	□□□□□ -0.63
MMS19-208	ENST00000437002	LINC00526	Q96FQ7	95 aa		11.14	□□□□□ -0.63
MMS19-208	ENST00000437002		A0A0J9YXV3	536 aa		11.13	□□□□□ -0.63
MMS19-208	ENST00000437002		K7EN84	100 aa		11.13	□□□□□ -0.63
MMS19-208	ENST00000437002	RNASE7	Q9H1E1	156 aa	Known RBP	11.13	□□□□□ -0.63
MMS19-208	ENST00000437002	MED9	Q9NWA0	146 aa		11.13	□□□□□ -0.63
MMS19-208	ENST00000437002	PDE6D	O43924	150 aa		11.12	□□□□□ -0.63
MMS19-208	ENST00000437002	FGF6	P10767	208 aa		11.12	□□□□□ -0.63
MMS19-208	ENST00000437002	NDUFA5	Q16718	116 aa		11.12	□□□□□ -0.63
MMS19-208	ENST00000437002	FAM231B	A6NCW3	169 aa		11.11	□□□□□ -0.63
MMS19-208	ENST00000437002	BLOC1S1	P78537	153 aa		11.11	□□□□□ -0.63
MMS19-208	ENST00000437002	AMMECR1L	Q6DCA0	310 aa		11.11	□□□□□ -0.63
MMS19-208	ENST00000437002	RNASEK	Q6P5S7	137 aa	Known RBP	11.11	□□□□□ -0.63
MMS19-208	ENST00000437002	GAS8-AS1	O95177	125 aa		11.1	□□□□□ -0.63
MMS19-208	ENST00000437002	NCR2	O95944	276 aa		11.1	□□□□□ -0.63
MMS19-208	ENST00000437002	BCL2	P10415	239 aa		11.1	□□□□□ -0.63
MMS19-208	ENST00000437002	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
MMS19-208	ENST00000437002	RPP21	Q9H633	154 aa	Known RBP	11.1	□□□□□ -0.63
MMS19-208	ENST00000437002	LPA	P08519	4548 aa		11.1	□□□□□ -0.63
MMS19-208	ENST00000437002	LINC00862	A6NCI5	91 aa		11.09	□□□□□ -0.63
MMS19-208	ENST00000437002	XCL1	P47992	114 aa		11.09	□□□□□ -0.63
MMS19-208	ENST00000437002	OR5A1	Q8NGJ0	315 aa		11.09	□□□□□ -0.63
MMS19-208	ENST00000437002	LINC00959	A0A1B0GUT2	108 aa		11.08	□□□□□ -0.64
MMS19-208	ENST00000437002	SDHAF1	A6NFY7	115 aa		11.08	□□□□□ -0.64
MMS19-208	ENST00000437002		H7C423	109 aa		11.08	□□□□□ -0.64
MMS19-208	ENST00000437002	APCS	P02743	223 aa		11.08	□□□□□ -0.64
MMS19-208	ENST00000437002	OCC1	Q8TAD7	63 aa		11.08	□□□□□ -0.64
MMS19-208	ENST00000437002	BIN3	Q9NQY0	253 aa		11.08	□□□□□ -0.64
MMS19-208	ENST00000437002	CCL25	O15444	150 aa		11.07	□□□□□ -0.64
MMS19-208	ENST00000437002	SPINK6	Q6UWN8	80 aa		11.07	□□□□□ -0.64
MMS19-208	ENST00000437002	TSHB	P01222	138 aa		11.06	□□□□□ -0.64
MMS19-208	ENST00000437002	ESD	P10768	282 aa		11.06	□□□□□ -0.64
MMS19-208	ENST00000437002	CARD19	Q96LW7	228 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms