RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 A6NDN8 102 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 H7C1H1 209 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 K7EMI3 77 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 KIR2DL4Q99706 377 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 CMYA5Q8N3K9 4069 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 RHODO00212 210 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 C2orf66Q6UXQ4 117 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 ZFP2Q6ZN57 461 aa15.12■□□□□ 0.01
PTPRF-207ENST00000436724 EDA2RQ9HAV5 297 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 HIGD1BQ9P298 99 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 GAGE12BA1L429 117 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 C9orf118A6NHY6 69 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 GAGE7O76087 117 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 GAGE12FP0CL80 117 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 GAGE12GP0CL81 117 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 GAGE12IP0CL82 117 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 TOMM6Q96B49 74 aa15.11■□□□□ 0.01
PTPRF-207ENST00000436724 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-207ENST00000436724 DEFB135Q30KP9 77 aa15.09■□□□□ 0.01
PTPRF-207ENST00000436724 X6R8D5 127 aa15.09■□□□□ 0.01
PTPRF-207ENST00000436724 KRTAP10-11P60412 298 aa15.09■□□□□ 0.01
PTPRF-207ENST00000436724 NEXN-AS1Q8NBZ9 246 aa15.09■□□□□ 0.01
PTPRF-207ENST00000436724 IGHV4-30-4P0DP06 118 aa15.08■□□□□ 0.01
PTPRF-207ENST00000436724 RPL39P62891 51 aaKnown RBP15.08■□□□□ 0.01
PTPRF-207ENST00000436724 MAPKAPK5-AS1Q8N8E1 139 aa15.08■□□□□ 0.01
PTPRF-207ENST00000436724 SCGB3A1Q96QR1 104 aa15.08■□□□□ 0.01
PTPRF-207ENST00000436724 TRBV25-1A0A075B6N4 114 aa15.08■□□□□ 0
PTPRF-207ENST00000436724 TRAV12-1A0A0B4J245 112 aa15.08■□□□□ 0
PTPRF-207ENST00000436724 TSHBP01222 138 aa15.08■□□□□ 0
PTPRF-207ENST00000436724 OVOL2Q9BRP0 275 aa15.08■□□□□ 0
PTPRF-207ENST00000436724 TNFRSF18Q9Y5U5 241 aa15.08■□□□□ 0
PTPRF-207ENST00000436724 TRGV2A0A075B6R0 118 aa15.07■□□□□ 0
PTPRF-207ENST00000436724 TP53TG1Q9Y2A0 90 aa15.07■□□□□ 0
PTPRF-207ENST00000436724 TRAV4A0A0B4J268 109 aa15.07■□□□□ 0
PTPRF-207ENST00000436724 I3L3M4 83 aa15.07■□□□□ 0
PTPRF-207ENST00000436724 KIR2DL5BQ8NHK3 375 aa15.06■□□□□ 0
PTPRF-207ENST00000436724 CHAC1Q9BUX1 264 aa15.06■□□□□ 0
PTPRF-207ENST00000436724 H3BUT2 72 aa15.05■□□□□ 0
PTPRF-207ENST00000436724 PLNP26678 52 aa15.05■□□□□ 0
PTPRF-207ENST00000436724 APOC4P55056 127 aa15.05■□□□□ 0
PTPRF-207ENST00000436724 RBX1P62877 108 aa15.05■□□□□ 0
PTPRF-207ENST00000436724 NAA38Q9BRA0 125 aaKnown RBP15.05■□□□□ 0
PTPRF-207ENST00000436724 CBY1Q9Y3M2 126 aa15.05■□□□□ 0
PTPRF-207ENST00000436724 F8VRH5 84 aa15.05■□□□□ -0
PTPRF-207ENST00000436724 RAB37Q96AX2 223 aa15.05■□□□□ -0
PTPRF-207ENST00000436724 CYSLTR1Q9Y271 337 aa15.05■□□□□ -0
PTPRF-207ENST00000436724 FXYD2P54710 66 aa15.04■□□□□ -0
PTPRF-207ENST00000436724 ANK2Q01484 3957 aa15.04■□□□□ -0
PTPRF-207ENST00000436724 IGHV3-38A0A0C4DH36 116 aa15.04■□□□□ -0
PTPRF-207ENST00000436724 GAGE10A6NGK3 116 aa15.04■□□□□ -0
PTPRF-207ENST00000436724 CHTOPQ9Y3Y2 248 aaKnown RBP15.04■□□□□ -0
PTPRF-207ENST00000436724 GCSHP23434 173 aa15.03■□□□□ -0
PTPRF-207ENST00000436724 RIPPLY3P57055 190 aa15.03■□□□□ -0
PTPRF-207ENST00000436724 PHLDA1Q8WV24 401 aaPredicted RBP15.03■□□□□ -0
PTPRF-207ENST00000436724 SLC25A29Q8N8R3 303 aa15.02■□□□□ -0
PTPRF-207ENST00000436724 CST9LQ9H4G1 147 aa15.02■□□□□ -0
PTPRF-207ENST00000436724 DEFB4AO15263 64 aa15.02□□□□□ -0.01
PTPRF-207ENST00000436724 DEFB130BP0DP73 79 aa15.02□□□□□ -0.01
PTPRF-207ENST00000436724 DEFB130AP0DP74 79 aa15.02□□□□□ -0.01
PTPRF-207ENST00000436724 BAALCQ8WXS3 180 aa15.02□□□□□ -0.01
PTPRF-207ENST00000436724 OR11H2Q8NH07 326 aa15.01□□□□□ -0.01
PTPRF-207ENST00000436724 SMIM13P0DJ93 91 aa15.01□□□□□ -0.01
PTPRF-207ENST00000436724 ZNRF2Q8NHG8 242 aa15.01□□□□□ -0.01
PTPRF-207ENST00000436724 IGIPA6NJ69 53 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 G3V4G9 280 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 K7EQD1 137 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 RHOHQ15669 191 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 TM2D2Q9BX73 214 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 SMIM9A6NGZ8 99 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 EGFEM1PQ0D2K5 195 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 DNAJC30Q96LL9 226 aa15□□□□□ -0.01
PTPRF-207ENST00000436724 PRSS29PA6NIE9 313 aa14.99□□□□□ -0.01
PTPRF-207ENST00000436724 CEND1Q8N111 149 aa14.99□□□□□ -0.01
PTPRF-207ENST00000436724 C20orf203Q8NBC4 194 aa14.99□□□□□ -0.01
PTPRF-207ENST00000436724 NOTCH1P46531 2555 aa14.99□□□□□ -0.01
PTPRF-207ENST00000436724 K7EP34 96 aa14.98□□□□□ -0.01
PTPRF-207ENST00000436724 GTF2H5Q6ZYL4 71 aa14.98□□□□□ -0.01
PTPRF-207ENST00000436724 A0A1W2PPM0 123 aa14.98□□□□□ -0.01
PTPRF-207ENST00000436724 OPRPNQ99935 248 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-207ENST00000436724 TRBV7-3A0A075B6L6 115 aa14.97□□□□□ -0.01
PTPRF-207ENST00000436724 OCIAD2Q56VL3 154 aa14.97□□□□□ -0.01
PTPRF-207ENST00000436724 TRGV4A0A0C4DH28 118 aa14.96□□□□□ -0.01
PTPRF-207ENST00000436724 IGHV4-28A0A0C4DH34 117 aa14.96□□□□□ -0.01
PTPRF-207ENST00000436724 LOC100131303A0A0U1RQF7 123 aa14.96□□□□□ -0.01
PTPRF-207ENST00000436724 GAGE12JA6NER3 117 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 K7ERJ3 54 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 GAGE4Q13068 117 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 GAGE5Q13069 117 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 FHL2Q14192 279 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 GAGE13Q4V321 117 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 FAM222AQ5U5X8 452 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 TAL2Q16559 108 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 LINC00612Q8N6U2 182 aa14.95□□□□□ -0.02
PTPRF-207ENST00000436724 TRBV10-1A0A0K0K1A3 114 aa14.94□□□□□ -0.02
PTPRF-207ENST00000436724 RPL36AP83881 106 aaKnown RBP14.94□□□□□ -0.02
PTPRF-207ENST00000436724 SAMD5Q5TGI4 173 aa14.94□□□□□ -0.02
PTPRF-207ENST00000436724 RPL36ALQ969Q0 106 aaKnown RBP14.94□□□□□ -0.02
PTPRF-207ENST00000436724 TIMM17AQ99595 171 aa14.94□□□□□ -0.02
PTPRF-207ENST00000436724 CHCHD7Q9BUK0 85 aa14.94□□□□□ -0.02
PTPRF-207ENST00000436724 MYMXA0A1B0GTQ4 84 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms