RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 LRCOL1A6NCL2 159 aa13.95□□□□□ -0.18
GTF3A-203ENST00000435781 MT-ND4LP03901 98 aa13.95□□□□□ -0.18
GTF3A-203ENST00000435781 RPS10P46783 165 aaKnown RBP13.95□□□□□ -0.18
GTF3A-203ENST00000435781 AMTP48728 403 aa13.95□□□□□ -0.18
GTF3A-203ENST00000435781 FAM104BQ5XKR9 115 aa13.95□□□□□ -0.18
GTF3A-203ENST00000435781 COMMD7Q86VX2 200 aa13.95□□□□□ -0.18
GTF3A-203ENST00000435781 A0A1B0GXF2 115 aa13.94□□□□□ -0.18
GTF3A-203ENST00000435781 SMKR1H3BMG3 65 aa13.94□□□□□ -0.18
GTF3A-203ENST00000435781 HBBP68871 147 aa13.94□□□□□ -0.18
GTF3A-203ENST00000435781 ANAPC16Q96DE5 110 aa13.94□□□□□ -0.18
GTF3A-203ENST00000435781 RMI2Q96E14 147 aa13.94□□□□□ -0.18
GTF3A-203ENST00000435781 ST20Q9HBF5 79 aa13.94□□□□□ -0.18
GTF3A-203ENST00000435781 NCR2O95944 276 aa13.93□□□□□ -0.18
GTF3A-203ENST00000435781 Q0VG73 95 aa13.93□□□□□ -0.18
GTF3A-203ENST00000435781 MRPL51Q4U2R6 128 aaKnown RBP13.93□□□□□ -0.18
GTF3A-203ENST00000435781 ENHOQ6UWT2 76 aa13.93□□□□□ -0.18
GTF3A-203ENST00000435781 TMEM70Q9BUB7 260 aa13.93□□□□□ -0.18
GTF3A-203ENST00000435781 COX11Q9Y6N1 276 aa13.93□□□□□ -0.18
GTF3A-203ENST00000435781 IGKV2D-24A0A075B6R9 120 aa13.92□□□□□ -0.18
GTF3A-203ENST00000435781 F8W036 122 aa13.92□□□□□ -0.18
GTF3A-203ENST00000435781 CRPP02741 224 aa13.92□□□□□ -0.18
GTF3A-203ENST00000435781 S100A8P05109 93 aa13.92□□□□□ -0.18
GTF3A-203ENST00000435781 FUSP35637 526 aaKnown RBP eCLIP13.92□□□□□ -0.18
GTF3A-203ENST00000435781 LINC00862A6NCI5 91 aa13.91□□□□□ -0.18
GTF3A-203ENST00000435781 I3L3M4 83 aa13.91□□□□□ -0.18
GTF3A-203ENST00000435781 PMCHP20382 165 aa13.91□□□□□ -0.18
GTF3A-203ENST00000435781 MAPKAPK5-AS1Q8N8E1 139 aa13.91□□□□□ -0.18
GTF3A-203ENST00000435781 NRACQ8N912 160 aa13.91□□□□□ -0.18
GTF3A-203ENST00000435781 PGPEP1Q9NXJ5 209 aa13.91□□□□□ -0.18
GTF3A-203ENST00000435781 A0A1B0GUV1 79 aa13.9□□□□□ -0.18
GTF3A-203ENST00000435781 UBE2L6O14933 153 aa13.9□□□□□ -0.18
GTF3A-203ENST00000435781 APCSP02743 223 aa13.9□□□□□ -0.18
GTF3A-203ENST00000435781 POLR2KP53803 58 aaKnown RBP13.9□□□□□ -0.18
GTF3A-203ENST00000435781 ATP5L2Q7Z4Y8 100 aa13.9□□□□□ -0.18
GTF3A-203ENST00000435781 PRR34Q9NV39 138 aa13.9□□□□□ -0.18
GTF3A-203ENST00000435781 HERC2O95714 4834 aa13.9□□□□□ -0.18
GTF3A-203ENST00000435781 PPP1R17O96001 155 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 WFDC2Q14508 124 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 CDPF1Q6NVV7 123 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 CLPSL2Q6UWE3 100 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 LINC00269Q8N2A0 174 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 C20orf203Q8NBC4 194 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 SEC11CQ9BY50 192 aa13.89□□□□□ -0.19
GTF3A-203ENST00000435781 IGLV4-60A0A075B6I1 120 aa13.88□□□□□ -0.19
GTF3A-203ENST00000435781 TRBV27A0A0K0K1C4 114 aa13.88□□□□□ -0.19
GTF3A-203ENST00000435781 TSHBP01222 138 aa13.88□□□□□ -0.19
GTF3A-203ENST00000435781 C1orf43Q9BWL3 253 aa13.88□□□□□ -0.19
GTF3A-203ENST00000435781 TMEM242Q9NWH2 141 aa13.88□□□□□ -0.19
GTF3A-203ENST00000435781 MIAQ16674 131 aa13.87□□□□□ -0.19
GTF3A-203ENST00000435781 Q8N814 137 aa13.87□□□□□ -0.19
GTF3A-203ENST00000435781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.86□□□□□ -0.19
GTF3A-203ENST00000435781 IGKV2-29A2NJV5 120 aaPredicted RBP13.86□□□□□ -0.19
GTF3A-203ENST00000435781 LECT2O14960 151 aa13.86□□□□□ -0.19
GTF3A-203ENST00000435781 CKS2P33552 79 aa13.86□□□□□ -0.19
GTF3A-203ENST00000435781 SUMO2P61956 95 aaKnown RBP13.86□□□□□ -0.19
GTF3A-203ENST00000435781 BAALCQ8WXS3 180 aa13.86□□□□□ -0.19
GTF3A-203ENST00000435781 RYR1P21817 5038 aa13.85□□□□□ -0.19
GTF3A-203ENST00000435781 REG3AQ06141 175 aa13.85□□□□□ -0.19
GTF3A-203ENST00000435781 APOBP04114 4563 aaKnown RBP13.85□□□□□ -0.19
GTF3A-203ENST00000435781 H7C423 109 aa13.84□□□□□ -0.19
GTF3A-203ENST00000435781 VCYO14598 125 aa13.84□□□□□ -0.19
GTF3A-203ENST00000435781 ESDP10768 282 aa13.84□□□□□ -0.19
GTF3A-203ENST00000435781 NTN5Q8WTR8 489 aaPredicted RBP13.84□□□□□ -0.19
GTF3A-203ENST00000435781 TRBV24-1A0A075B6N3 115 aa13.83□□□□□ -0.2
GTF3A-203ENST00000435781 D6R8Y8 96 aa13.83□□□□□ -0.2
GTF3A-203ENST00000435781 AMMECR1LQ6DCA0 310 aa13.83□□□□□ -0.2
GTF3A-203ENST00000435781 BTF3L4Q96K17 158 aa13.83□□□□□ -0.2
GTF3A-203ENST00000435781 CTDSP1Q9GZU7 261 aa13.83□□□□□ -0.2
GTF3A-203ENST00000435781 HSPG2P98160 4391 aa13.83□□□□□ -0.2
GTF3A-203ENST00000435781 TNFRSF6BO95407 300 aa13.82□□□□□ -0.2
GTF3A-203ENST00000435781 FGF6P10767 208 aa13.82□□□□□ -0.2
GTF3A-203ENST00000435781 C10orf91Q5T1B1 145 aa13.82□□□□□ -0.2
GTF3A-203ENST00000435781 IMMP2LQ96T52 175 aa13.82□□□□□ -0.2
GTF3A-203ENST00000435781 C20orf78Q9BR46 151 aa13.82□□□□□ -0.2
GTF3A-203ENST00000435781 IGLV5-52A0A0A0MRZ9 124 aa13.81□□□□□ -0.2
GTF3A-203ENST00000435781 PPBPP02775 128 aa13.81□□□□□ -0.2
GTF3A-203ENST00000435781 RNASEKQ6P5S7 137 aaKnown RBP13.81□□□□□ -0.2
GTF3A-203ENST00000435781 KRTAP26-1Q6PEX3 210 aa13.81□□□□□ -0.2
GTF3A-203ENST00000435781 CARHSP1Q9Y2V2 147 aaKnown RBP13.81□□□□□ -0.2
GTF3A-203ENST00000435781 IGLV10-54A0A075B6I4 117 aa13.8□□□□□ -0.2
GTF3A-203ENST00000435781 CDK2AP2O75956 126 aa13.8□□□□□ -0.2
GTF3A-203ENST00000435781 NPYP01303 97 aa13.8□□□□□ -0.2
GTF3A-203ENST00000435781 HLA-DQA1P01909 254 aa13.8□□□□□ -0.2
GTF3A-203ENST00000435781 FCER1GP30273 86 aa13.8□□□□□ -0.2
GTF3A-203ENST00000435781 RPL32P62910 135 aaKnown RBP13.8□□□□□ -0.2
GTF3A-203ENST00000435781 KIR2DL4Q99706 377 aa13.8□□□□□ -0.2
GTF3A-203ENST00000435781 TRAV8-4A0A0B4J246 113 aa13.79□□□□□ -0.2
GTF3A-203ENST00000435781 C7orf77A4D0Y5 90 aa13.79□□□□□ -0.2
GTF3A-203ENST00000435781 ZNF25P17030 456 aaPredicted RBP13.79□□□□□ -0.2
GTF3A-203ENST00000435781 ORMDL3Q8N138 153 aa13.79□□□□□ -0.2
GTF3A-203ENST00000435781 PHOX2AO14813 284 aa13.78□□□□□ -0.2
GTF3A-203ENST00000435781 GCSHP23434 173 aa13.78□□□□□ -0.2
GTF3A-203ENST00000435781 KRTAP10-1P60331 282 aa13.78□□□□□ -0.2
GTF3A-203ENST00000435781 TMEM136Q6ZRR5 245 aa13.78□□□□□ -0.2
GTF3A-203ENST00000435781 SMIM2Q9BVW6 85 aa13.78□□□□□ -0.2
GTF3A-203ENST00000435781 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.77□□□□□ -0.21
GTF3A-203ENST00000435781 PRELID3AQ96N28 172 aa13.77□□□□□ -0.21
GTF3A-203ENST00000435781 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
GTF3A-203ENST00000435781 TRAV9-1A0A075B6T8 112 aa13.75□□□□□ -0.21
GTF3A-203ENST00000435781 IGKV3OR2-268A0A0C4DH90 116 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms