RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 TIMM21Q9BVV7 248 aa10.94□□□□□ -0.66
DDX56-205ENST00000433257 TRAV2A0A0B4J234 112 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 TRBV10-2A0A0K0K1G8 114 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 H3BT86 120 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 SPRY2O43597 315 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 TIMM17BO60830 172 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 SNCGO76070 127 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 IFITM1P13164 125 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 LINC01620Q4KN68 170 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 WNK2Q9Y3S1 2297 aa10.93□□□□□ -0.66
DDX56-205ENST00000433257 IGLV4-3A0A075B6K6 122 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 K7EQG2 157 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 SRD5A1P18405 259 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 GATA3P23771 443 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 MRPS36P82909 103 aaKnown RBP10.92□□□□□ -0.66
DDX56-205ENST00000433257 COPS9Q8WXC6 57 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 MUC4Q99102 2169 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 A0A0J9YXY3 114 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 B4DSR2 109 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 LINC01356Q8N9X3 169 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 SVIPQ8NHG7 77 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 ANAPC13Q9BS18 74 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 JPT2Q9H910 190 aa10.92□□□□□ -0.66
DDX56-205ENST00000433257 FLNAP21333 2647 aaKnown RBP10.91□□□□□ -0.66
DDX56-205ENST00000433257 IGKV3-7A0A075B6H7 116 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 TRAV26-1A0A087WT03 109 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 TGFAP01135 160 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 IGHV4-31P0DP07 118 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 DEFB1P60022 68 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 Q8N1Y9 231 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 CITED1Q99966 193 aa10.91□□□□□ -0.66
DDX56-205ENST00000433257 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
DDX56-205ENST00000433257 TINCRA0A1B0GVN0 87 aa10.9□□□□□ -0.66
DDX56-205ENST00000433257 FHL3Q13643 280 aa10.9□□□□□ -0.66
DDX56-205ENST00000433257 LY6EQ16553 131 aa10.9□□□□□ -0.66
DDX56-205ENST00000433257 SMR3AQ99954 134 aa10.9□□□□□ -0.66
DDX56-205ENST00000433257 HIVEP1P15822 2718 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 LY6G6DO95868 133 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 CD28P10747 220 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 GAGE2BQ13066 116 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 GAGE2EQ4V326 116 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 BRD3OSQ6XYD6 125 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 RAX2Q96IS3 184 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 DNAJC30Q96LL9 226 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 GAGE2DQ9UEU5 116 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 TRAV8-4A0A0B4J246 113 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 H3BMM0 161 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 MSMBP08118 114 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 IGHV3-30-3P0DP02 117 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 PSMB8P28062 276 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 UBE2WQ96B02 151 aa10.89□□□□□ -0.67
DDX56-205ENST00000433257 ACANP16112 2415 aa10.88□□□□□ -0.67
DDX56-205ENST00000433257 A0A0J9YXV3 536 aa10.88□□□□□ -0.67
DDX56-205ENST00000433257 FAM240AA0A1B0GVK7 77 aa10.88□□□□□ -0.67
DDX56-205ENST00000433257 MIAQ16674 131 aa10.88□□□□□ -0.67
DDX56-205ENST00000433257 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
DDX56-205ENST00000433257 CR1P17927 2039 aa10.87□□□□□ -0.67
DDX56-205ENST00000433257 IGHV3OR16-10A0A075B7F0 116 aa10.87□□□□□ -0.67
DDX56-205ENST00000433257 GAGE5Q13069 117 aa10.87□□□□□ -0.67
DDX56-205ENST00000433257 GAGE6Q13070 117 aa10.87□□□□□ -0.67
DDX56-205ENST00000433257 MED13LQ71F56 2210 aa10.87□□□□□ -0.67
DDX56-205ENST00000433257 NTN5Q8WTR8 489 aaPredicted RBP10.86□□□□□ -0.67
DDX56-205ENST00000433257 ICOSQ9Y6W8 199 aa10.86□□□□□ -0.67
DDX56-205ENST00000433257 F8P00451 2351 aa10.86□□□□□ -0.67
DDX56-205ENST00000433257 BLCAPP62952 87 aa10.85□□□□□ -0.67
DDX56-205ENST00000433257 IGHV4-38-2P0DP08 117 aa10.85□□□□□ -0.67
DDX56-205ENST00000433257 CIRBPQ14011 172 aaKnown RBP10.85□□□□□ -0.67
DDX56-205ENST00000433257 TTC32Q5I0X7 151 aa10.85□□□□□ -0.67
DDX56-205ENST00000433257 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
DDX56-205ENST00000433257 LINC00467Q9BRT7 94 aa10.85□□□□□ -0.67
DDX56-205ENST00000433257 NDUFA12Q9UI09 145 aa10.85□□□□□ -0.67
DDX56-205ENST00000433257 A8MTW9 85 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 KRTAP1-1Q07627 177 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 ZNF415Q09FC8 603 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 DEFB121Q5J5C9 76 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 C2orf82Q6UX34 121 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 LITAFQ99732 161 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 PPDPFQ9H3Y8 114 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 CSPG4Q6UVK1 2322 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 ZANQ9Y493 2812 aa10.84□□□□□ -0.67
DDX56-205ENST00000433257 TRIAP1O43715 76 aa10.83□□□□□ -0.68
DDX56-205ENST00000433257 ELANEP08246 267 aa10.83□□□□□ -0.68
DDX56-205ENST00000433257 TIRAPP58753 221 aa10.83□□□□□ -0.68
DDX56-205ENST00000433257 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.68
DDX56-205ENST00000433257 SPXQ9BT56 116 aa10.83□□□□□ -0.68
DDX56-205ENST00000433257 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
DDX56-205ENST00000433257 H7C2G1 150 aa10.82□□□□□ -0.68
DDX56-205ENST00000433257 EIF4EBP3O60516 100 aaPredicted RBP10.82□□□□□ -0.68
DDX56-205ENST00000433257 ACYP1P07311 99 aa10.82□□□□□ -0.68
DDX56-205ENST00000433257 OPRPNQ99935 248 aaPredicted RBP10.82□□□□□ -0.68
DDX56-205ENST00000433257 TRAV12-2A0A075B6T6 113 aa10.82□□□□□ -0.68
DDX56-205ENST00000433257 J3QLI3 93 aa10.82□□□□□ -0.68
DDX56-205ENST00000433257 PRSS2P07478 247 aa10.82□□□□□ -0.68
DDX56-205ENST00000433257 LST1O00453 97 aa10.81□□□□□ -0.68
DDX56-205ENST00000433257 NDUFV3P56181 108 aaKnown RBP10.81□□□□□ -0.68
DDX56-205ENST00000433257 IGHV3-64A0A075B6Q5 118 aa10.8□□□□□ -0.68
DDX56-205ENST00000433257 TMEM61Q8N0U2 210 aa10.8□□□□□ -0.68
DDX56-205ENST00000433257 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.79□□□□□ -0.682e-7■■■□□ 18
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms